Glycoside Hydrolase Family 30 / Subf 5

Activities in Familyendo-β-1,4-xylanase (EC 3.2.1.8); β-glucosidase (3.2.1.21); β-glucuronidase (EC 3.2.1.31); β-xylosidase (EC 3.2.1.37); β-fucosidase (EC 3.2.1.38); glucosylceramidase (EC 3.2.1.45); β-1,6-glucanase (EC 3.2.1.75); glucuronoarabinoxylan endo-β-1,4-xylanase (EC 3.2.1.136); endo-β-1,6-galactanase (EC:3.2.1.164); [reducing end] β-xylosidase (EC 3.2.1.-)
Activities in Sub Family
Mechanism Retaining
ClanGH-A
3D Structure Status( β / α ) 8
Catalytic Nucleophile/BaseGlu (experimental)
Catalytic Proton DonorGlu (inferred)
NoteFollowing St John et al. [FEBS Letters 584:4435-4441 (2010); PMID: 20932833] several GH5 subfamilies have been reassigned to GH30. The subfamilies in GH30 are now indicated.
External resourcesCAZypedia; Gaucher Disease; PRINTS;
Statistics GenBank accession (139); Uniprot accession (28);
Bacteria
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 AHOG_22090   Actinoalloteichus hoggarensis DSM 45943 ASO22033.1     5
 SAMN04489716_4630   Actinoplanes derwentensis DSM 43941 SDT57818.1     5
 SAMN04489716_1906   Actinoplanes derwentensis DSM 43941 SDS89210.1     5
 L083_5806 (fragment)   Actinoplanes sp. N902-109 AGL19316.1     5
 SAMN04489717_0881   Actinopolymorpha singaporensis DSM 22024 SDR87740.1     5
 Amir_2560   Actinosynnema mirum DSM 43827 ACU36497.1 C6WMG8   5
 CNX65_12995   Actinosynnema pretiosum X47 ATE54094.1     5
 ATC03_17300   Agromyces aureus AR33 ANJ28198.1     5
 B737_7371   Amycolatopsis mediterranei RB AGT88032.1     5
 RAM_38455   Amycolatopsis mediterranei S699 AEK46158.1
AFO80904.1
    5
 AMED_7482   Amycolatopsis mediterranei U32 ADJ49196.1 D8I9M9   5
 SD37_21780   Amycolatopsis orientalis B-37 ANN18019.1     5
 CGK93_20045   Arthrobacter sp. YN ASN21710.1     5
 CGK93_05515   Arthrobacter sp. YN ASN19209.1     5
 AB656_00595   Bifidobacterium actinocoloniiforme DSM 22766 AKV55018.1     5
 BL105A_1849   Bifidobacterium longum 105-A BAP84454.1     5
 B624_1709   Bifidobacterium longum 35624 AOL11151.1     5
 BBG7_1961   Bifidobacterium longum BG7 ALE37147.1     5
 GS08_10135   Bifidobacterium longum BXY01 AIF91426.1     5
 BLD_1519   Bifidobacterium longum DJO10A ACD98964.1     5
 BL0157   Bifidobacterium longum NCC2705 AAN24012.1
NP_695376.1
Q8G7T8   5
 SAMN04489749_0213   Bifidobacterium longum Su859 SDO32479.1     5
 BLIF_1909   Bifidobacterium longum subsp. infantis 157F BAJ72043.1     5
 BL1206_1978   Bifidobacterium longum subsp. longum AH1206 AOP02010.1     5
 BBMN68_1454   Bifidobacterium longum subsp. longum BBMN68 ADQ02475.1 E4R242   5
 BBL306_1413   Bifidobacterium longum subsp. longum CCUG30698 ALO74942.1     5
 BLGT_09870   Bifidobacterium longum subsp. longum GT15 AIW44396.1     5
 BLLJ_1841   Bifidobacterium longum subsp. longum JCM 1217 BAJ67505.1     5
 BLJ_1955   Bifidobacterium longum subsp. longum JDM301 ADH01377.1 D6ZWX1   5
 BLNIAS_00036   Bifidobacterium longum subsp. longum KACC 91563 AEI96592.1     5
 B8809_1780   Bifidobacterium longum subsp. longum NCIMB8809 ALO73450.1     5
 ADH70_001600 (fragment)   Blautia coccoides YL58 ASU27677.1     5
 A4V09_03280 (fragment)   Blautia sp. YL58 ANU74869.1     5
 CIY_10290   Butyrivibrio fibrisolvens 16/4 CBK73885.1 D4J196   5
 bhn_I2734   Butyrivibrio hungatei MB2003 AOZ97766.1     5
 bpr_I2935 (Xsa43J)   Butyrivibrio proteoclasticus B316 ADL35665.1 E0RVY3   5
 bpr_I2937   Butyrivibrio proteoclasticus B316 ADL35667.1 E0RVY5   5
 IJ00_26630   Calothrix sp. 336/3 AKG24919.1     5
 Cseg_1822   Caulobacter segnis ATCC 21756 ADG10296.1 D5VGH7   5
 Celf_3633   Cellulomonas fimi ATCC 484 AEE47740.1     5
 Celgi_0814   Cellulomonas gilvus ATCC 13127 AEI11333.1     5
 CBR64_12440   Cellulosimicrobium cellulans PSBB019 ARU52154.1     5
 B8281_18895   Cellulosimicrobium sp. TH-20 ARK06487.1     5
 Closa_2607   [Clostridium] saccharolyticum WM1 ADL05173.1 D9R566   5
 PA27867_0443   Cryobacterium arcticum PAMC 27867 ANP71414.1     5
 CYFUS_009802   Cystobacter fuscus DSM 52655 ATB44315.1     5
 AAM4_2321   Desulfitobacterium hafniense CED92153.1     5
 Fisuc_2919 / FSU_0182   Fibrobacter succinogenes subsp. succinogenes S85 ACX76499.1
ADL26934.1
C9RP31   5
 OP10G_1091   Fimbriimonas ginsengisoli Gsoil 348 AIE84459.1     5
 I598_3442   Isoptericola dokdonensis DS-3 ANC32950.1     5
 ORF   Kibdelosporangium sp. MJ126-NF4 CTQ97110.1     5
 B6264_03180   Kitasatospora aureofaciens DM-1 ARF78052.1     5
 BBK82_35940 (fragment)   Lentzea guizhouensis DHS C013 ANZ40597.1     5
 BBK82_30440   Lentzea guizhouensis DHS C013 ANZ43149.1     5
 BBK82_39515   Lentzea guizhouensis DHS C013 ANZ41165.1     5
 BO218_08150   Microbacterium paludicola CC3 APF34155.1     5
 BJP65_11165   Microbacterium sp. BH-3-3-3 AOX46304.1     5
 MTES_2085   Microbacterium testaceum StLB037 BAJ75049.1     5
 MTES_2698   Microbacterium testaceum StLB037 BAJ75662.1     5
 GA0070613_4073 (fragment)   Micromonospora inositola DSM 43819 SCG65898.1     5
 SAMN05444162_1352   Paenibacillaceae bacterium GAS479 SDS38076.1     5
 Pjdr2_4120   Paenibacillus sp. JDR-2 ACT02749.1 C6D6H6   5
 LPB68_15255   Paenibacillus sp. LPB0068 AOZ93424.1     5
 BS614_25960   Paenibacillus xylanexedens PAMC 22703 APO47158.1     5
 BS614_25975   Paenibacillus xylanexedens PAMC 22703 APO48420.1     5
 L21SP3_00191 (fragment)   Phycisphaerae bacterium L21-RPul-D3 AQQ08415.1     5
 L21SP3_00190 (fragment)   Phycisphaerae bacterium L21-RPul-D3 AQQ08414.1     5
 STSP1_00774   Phycisphaerae bacterium ST-PulAB-D4 ARN56393.1     5
 BWO91_15115   Plantibacter flavus 251 AQX81122.1     5
 Achl_1730   Pseudarthrobacter chlorophenolicus A6 ACL39711.1 B8H6Z0   5
 SAMN04489743_2109   Pseudarthrobacter equi IMMIB L-1606 SDT23523.1     5
 AD2_02830   Ruminiclostridium thermocellum AD2 ALX09808.1     5
 Cthe_2139 (CBM42C)   Ruminiclostridium thermocellum ATCC 27405 ABN53343.1 A3DHB4   5
 Clo1313_2795   Ruminiclostridium thermocellum DSM 1313 ADU75777.1     5
 LQRI_2841   Ruminiclostridium thermocellum DSM 2360 LQRI ANV77582.1     5
 Rumal_3361   Ruminococcus albus 7 = DSM 20455 ADU23821.1 E0LDT8   5
 Sked_04290   Sanguibacter keddieii DSM 10542 ACZ20395.1 D1BKB8   5
 sce0966   Sorangium cellulosum So ce56 CAN91123.1 A9EUR4   5
 SCE1572_06575   Sorangium cellulosum So0157-2 AGP34188.1     5
 AV944_02285   Sphingomonas sp. LK11 APX64867.1     5
 STIAU_2635   Stigmatella aurantiaca DW4/3-1 EAU67098.1
ADO68177.1
Q094G7   5
 SMD44_00316   Streptomyces alboflavus MDJK44 ARX80918.1     5
 SAM23877_0796   Streptomyces ambofaciens ATCC 23877 AKZ53845.1     5
 SAML0716   Streptomyces ambofaciens ATCC 23877 CAJ89702.1 A3KJ18   5
 SAM40697_0679   Streptomyces ambofaciens DSM 40697 ANB04641.1     5
 BV401_26860   Streptomyces autolyticus CGMCC0516 AQA13512.1     5
 SAV1026   Streptomyces avermitilis MA-4680 = NBRC 14893 BAC68736.1
NP_822201.1
    5
 endo-β-1,6-galactanase (Sa1,6Gal5A;SAV5205) (1,6Gal5A) 3.2.1.164 Streptomyces avermitilis MA-4680 = NBRC 14893 BAC72917.1
NP_826382.1
    5
 SBI_02197   Streptomyces bingchenggensis BCW-1 ADI05318.1 D7BTA3   5
 SCO7406 or SC6D11.02c   Streptomyces coelicolor A3(2) CAB76325.1
NP_631455.1
Q9L153   5
 B446_15035   Streptomyces collinus Tu 365 AGS69825.1     5
 BN159_5412   Streptomyces davawensis JCM 4913 CCK29791.1     5
 SHXM_06247   Streptomyces hygroscopicus XM201 AQW52784.1     5
 ABB07_23640   Streptomyces incarnatus NRRL 8089 AKJ12917.1     5
 SIRAN4285   Streptomyces iranensis CDR07557.1     5
 SLINC_0852   Streptomyces lincolnensis NRRL 2936 ANS63076.1     5
 SLINC_3271   Streptomyces lincolnensis NRRL 2936 ANS65495.1     5
 SLINC_7884   Streptomyces lincolnensis NRRL 2936 ANS70108.1     5
 SLIV_02280   Streptomyces lividans TK24 AIJ11484.1     5
 B1H29_34300   Streptomyces pactum ACT12 AQS71285.1     5
 B1H29_23160   Streptomyces pactum ACT12 AQS69403.1     5
 M271_20665   Streptomyces rapamycinicus NRRL 5491 AGP55677.1     5
 TUE45_03468   Streptomyces reticuli CUW28747.1     5
 SCAB_57161   Streptomyces scabiei 87.22 CBG72743.1 C9Z2N2   5
 SCAB_43661   Streptomyces scabiei 87.22 CBG71431.1 C9Z737   5
 SCAB_78891   Streptomyces scabiei 87.22 CBG74853.1 C9ZCR4   5
 CGL27_28230   Streptomyces sp. 11-1-2 ASQ96434.1     5
 SAMN05428941_7356   Streptomyces sp. 2114.2 SDT81423.1     5
 SAMN05444521_5549   Streptomyces sp. 3124.6 SHI21759.1     5
 NI25_35355   Streptomyces sp. CCM_MD2014 AIV38162.1     5
 AS200_28100   Streptomyces sp. CdTB01 ALV35477.1     5
 M444_35675   Streptomyces sp. Mg1 AKL70722.1     5
 QR97_21915   Streptomyces sp. PBH53 AKN72081.1     5
 A4E84_38710   Streptomyces sp. S10(2016) AMW14875.1     5
 A4E84_15090   Streptomyces sp. S10(2016) AMW10716.1     5
 A4E84_21190   Streptomyces sp. S10(2016) AMW11790.1     5
 A4E84_36255   Streptomyces sp. S10(2016) AMW14466.1     5
 Strvi_1035   Streptomyces violaceusniger Tu 4113 AEM80802.1     5
 SXIM_48910   Streptomyces xiamenensis 318 AKG46275.1     5
 ORF   uncultured bacterium A2_10 AEW47939.1     5
 ORF   uncultured bacterium B2_18 AEW47948.1     5
 IMCC26134_01355   Verrucomicrobia bacterium IMCC26134 AKC83831.1     5
 BN444_02975   Xanthomonas translucens pv. translucens DSM 18974 SCB05496.1     5
 FD63_06050   Xanthomonas translucens pv. undulosa Xtu 4699 AKK67072.1     5
 ZPR_2627   Zunongwangia profunda SM-A87 ADF52950.1 D5BF52   5
Eukaryota
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 endo-b-(1,6)-D-galactanase (EbG)   Colletotrichum lindemuthianum 1472 APE41966.1     5
 endo-β-1,6-galactanase (6Gal;Nc6GAL;NCU09702.1) 3.2.1.164 Neurospora crassa OR74A XP_330352.1
EAA29705.1
Q7S2S4   5
 unnamed protein product   Podospora anserina S mat+ CAP64775.1
CDP29284.1
B2ALC8   5
 MYCTH_2301720   Thermothelomyces thermophila ATCC 42464 AEO56615.1     5
 endo-β-1,6-galactanase (6GAL;Tv6GAL;Tv1,6Gal5A) (1,6Gal5A) 3.2.1.164 Trichoderma viride BAC84995.1 Q76FP5   5
Top




Last update: 2017-10-09 © Copyright 1998-2017
AFMB - CNRS - Université d'Aix-Marseille