Glycoside Hydrolase Family 28

Activities in Familypolygalacturonase (EC 3.2.1.15); α-L-rhamnosidase (EC 3.2.1.40); exo-polygalacturonase (EC 3.2.1.67); exo-polygalacturonosidase (EC 3.2.1.82); rhamnogalacturonase (EC 3.2.1.171); rhamnogalacturonan α-1,2-galacturonohydrolase (EC 3.2.1.173); endo-xylogalacturonan hydrolase (EC 3.2.1.-)
Mechanism Inverting
ClanGH-N
3D Structure Status( β )-helix
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorAsp
External resourcesCAZypedia; HOMSTRAD; PROSITE;
Commercial Enzyme Provider(s)MEGAZYME;
Statistics GenBank accession (8210); Uniprot accession (1123); PDB accession (18); 3D entries (17); cryst (3)
All (6360) Archaea (11) Bacteria (3207) Eukaryota (3103) unclassified (39) Structure (17 - 3 cryst) Characterized (219)
unclassified
Protein Name EC#OrganismGenBank UniprotPDB/3D
 ORF   uncultured organism AGU10643.1    
 ORF   uncultured organism AGU12236.1    
 ORF (fragment)   uncultured prokaryote CRY97779.1    
 Sequence 35932 from patent US 7504490.   unidentified ACQ03715.1    
 Sequence 39390 from patent US 7504490.   unidentified ACQ07173.1    
 E1750_17260   Flavobacterium sp. GS13 QBN20463.1    
 E1750_12170   Flavobacterium sp. GS13 QBN19523.1    
 E2F51_13145   Erwinia sp. QL-Z3 QBR50864.1    
 E5554_03980   Sphingobium sp. PAMC28499 QCB37065.1    
 E5673_16870   Sphingomonas sp. PAMC26645 QCB44488.1    
 E5554_04000   Sphingobium sp. PAMC28499 QCB40507.1    
 E7745_01130   Duncaniella sp. C9 QCD38261.1    
 E7747_03390   Muribaculum sp. H5 QCD41438.1    
 E7747_09360   Muribaculum sp. H5 QCD42468.1    
 E7747_02885   Muribaculum sp. H5 QCD41346.1    
 E7747_07295   Muribaculum sp. H5 QCD42094.1    
 E7747_05275   Muribaculum sp. H5 QCD41743.1    
 E7745_01750   Duncaniella sp. C9 QCD38368.1    
 E7745_04375   Duncaniella sp. C9 QCD38843.1    
 E7747_06565   Muribaculum sp. H5 QCD41972.1    
 E7747_00350   Muribaculum sp. H5 QCD40899.1    
 E7745_05850   Duncaniella sp. C9 QCD39088.1    
 E7745_09820   Duncaniella sp. C9 QCD39802.1    
 E7745_07045   Duncaniella sp. C9 QCD39298.1    
 E7745_09760   Duncaniella sp. C9 QCD39791.1    
 E7747_12450   Muribaculum sp. H5 QCD43023.1    
 E7747_07290   Muribaculum sp. H5 QCD42093.1    
 FCN45_01940   Pantoea sp. SO10 QCP58219.1    
 EHF32_05610   Microbacterium sp. RG1 QCQ16240.1    
 FDZ78_10740   Duncaniella sp. B8 QCP72989.1    
 FDZ78_05480   Duncaniella sp. B8 QCP72058.1    
 FDZ78_09555   Duncaniella sp. B8 QCP72780.1    
 FDZ78_08085   Duncaniella sp. B8 QCP72532.1    
 FDZ78_13285   Duncaniella sp. B8 QCP73449.1    
 FDZ78_13225   Duncaniella sp. B8 QCP73439.1    
 FDZ78_04855   Duncaniella sp. B8 QCP71949.1    
 E7T10_11720   Brevundimonas sp. SGAir0440 QCQ99291.1    
 FE005_11165   Enterococcus sp. M190262 QCT92455.1    
 R.44-2   unidentified microorganism CAJ19131.1 Q2YI72  
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