Glycoside Hydrolase Family 28

Activities in Familypolygalacturonase (EC 3.2.1.15); α-L-rhamnosidase (EC 3.2.1.40); exo-polygalacturonase (EC 3.2.1.67); exo-polygalacturonosidase (EC 3.2.1.82); rhamnogalacturonase (EC 3.2.1.171); rhamnogalacturonan α-1,2-galacturonohydrolase (EC 3.2.1.173); endo-xylogalacturonan hydrolase (EC 3.2.1.-)
Mechanism Inverting
ClanGH-N
3D Structure Status( β )-helix
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorAsp
External resourcesCAZypedia; HOMSTRAD; PROSITE;
Commercial Enzyme Provider(s)MEGAZYME;
Statistics GenBank accession (6508); Uniprot accession (1123); PDB accession (17); 3D entries (16); cryst (3)
All (4767) Archaea (11) Bacteria (2142) Eukaryota (2608) unclassified (6) Structure (16 - 3 cryst) Characterized (213)
| 1 | ... | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | ... | 27 |
Eukaryota
Protein Name EC#OrganismGenBank UniprotPDB/3D
 At4g35670   Arabidopsis thaliana NP_195292.1
AEE86547.1
ANM66724.1
CAA20037.1
CAB80283.1
F4JN47
O81798
 
 At4g23820   Arabidopsis thaliana CAA23048.1
AAL32775.1
AAM91193.1
AEE84810.1
AIU50400.1
CAB81300.1
CAW63316.1
CBC45177.1
CBD34383.1
NP_194113.1
Q9SUP5  
 At2g40310   Arabidopsis thaliana AAD25946.1
AAD25666.1
AEC09811.1
CAX05840.1
CBD29081.1
NP_181560.1
Q9S761  
 At2g41850 (ADPG2)   Arabidopsis thaliana AAL84942.1
AAC02763.1
AAN60351.1
AEC10040.1
O22935
Q8H782
Q8RY29
 
 At5g44840   Arabidopsis thaliana AAC79137.1
AED95167.1
AED95167.2
BAB10865.1
NP_199297.1
O48576  
 At5g44830   Arabidopsis thaliana AAC79138.1
AED95166.1
BAB08836.1
NP_199296.1
O48577
Q9FIY9
 
 At2g23900   Arabidopsis thaliana AAC63679.1
ABE65854.1
ABK28510.1
AEC07500.1
CAW63329.1
CAW63347.1
CBC45204.1
CBC45241.1
NP_179968.2
O82218  
 At4g01890   Arabidopsis thaliana AAD22651.1
AEE82091.1
AEE82091.2
CAB80682.1
NP_192098.1
Q9SYI7  
 At4g18180   Arabidopsis thaliana CAB78820.1
AEE84007.1
AEE84007.2
CAA16789.1
NP_193552.1
O49721
Q9M0M1
 
 At2g26620   Arabidopsis thaliana AAC14511.1
AEC07868.1
CAX05839.1
CBD29080.1
NP_180230.1
O48729  
 polygalacturonase (ADPG1;At3g57510) 3.2.1.15 Arabidopsis thaliana AAC98923.1
AAO63440.1
AEE79664.1
BAC42580.1
CAA05525.1
CAB66108.1
NP_191310.1
O23147  
 At3g14040 (polygalacturonase) 3.2.1.15 Arabidopsis thaliana CAA11160.1
AAL32525.1
AAM47954.1
AEE75458.1
BAB02336.1
BAH20364.1
CAA51692.1
NP_188020.1
O65401
Q39094
Q8W4P2
Q9LVJ4
 
 At1g80170   Arabidopsis thaliana AAD55489.1
AAK76676.1
AAN13206.1
AEE36366.1
ANM58215.1
NP_178134.1
NP_565232.1
Q94AJ5
Q9SSC2
 
 At1g80140   Arabidopsis thaliana AAD55472.1
AEE36362.1
NP_178131.1
Q9SSC5  
 At1g70500   Arabidopsis thaliana AAG52465.1
AAF04869.1
AEE35071.1
NP_177207.1
Q9CAL5  
 At3g48950   Arabidopsis thaliana CAB62015.1
AAY78763.1
ABE66001.1
AEE78476.1
CAW63332.1
CBC45212.1
NP_190464.1
Q9SMT3  
 At1g10640   Arabidopsis thaliana NP_563875.6
AAF17670.1
AAK63956.1
AAN28898.1
AEE28612.1
NP_172534.1
NP_563875.1
NP_563875.2
Q94BV8
Q9SGY5
 
 At3g07970 (QRT2)   Arabidopsis thaliana AAF21207.1
AEE74626.1
NP_187454.1
Q9SFB7  
 At3g07850 (exopolygalacturonase-2)   Arabidopsis thaliana AAF21195.1
AAL07022.1
AAM14139.1
AEE74611.1
CAA51033.1
NP_187442.1
P49063
P49063
 
 At3g07840   Arabidopsis thaliana AAF21194.1
ABE65925.1
AEE74610.1
NP_187441.1
Q9SFD0  
 At3g07830   Arabidopsis thaliana AAF21193.1
AAO63309.1
AEE74609.1
BAC42591.1
NP_187440.1
Q8GXZ2
Q9SFD1
 
 At3g07820   Arabidopsis thaliana AAF21192.1
AAL38715.1
AAM20184.1
AAM65120.1
AEE74608.1
BAD94423.1
CAA05892.1
CAA06610.1
CAX05848.1
CBD29089.1
NP_187439.1
O65905
Q9SFD2
 
 At1g23470 (fragment)   Arabidopsis thaliana AAF79585.1
AEE30390.2
NP_173761.1
NP_173761.2
Q9LQD0  
 At3g62110   Arabidopsis thaliana AAG40344.1
AAN31866.1
AEE80311.1
ANM64987.1
CAB71871.1
CAW63338.1
CAW63358.1
CBC45223.1
CBC45262.1
NP_191770.1
NP_567126.1
Q9FPJ2
Q9M1R3
 
 At3g61490   Arabidopsis thaliana CAB71079.1
AEE80211.1
AEE80212.1
AEE80213.1
ANM65446.1
ANM65447.1
CAW63333.1
CBC45213.1
NP_191708.1
Q9M318  
 At3g59850   Arabidopsis thaliana AAU90056.1
AAV43782.1
AEE79978.1
ANM64373.1
CAB75804.1
NP_191544.1
Q5XF50
Q9M1Y9
 
 At4g33440   Arabidopsis thaliana AAO22613.1
AAO42348.1
AEE86225.1
CAB38802.1
CAB80061.1
CAW63335.1
CAW63359.1
CBC45217.1
CBC45265.1
NP_195070.1
NP_195070.2
Q84K13
Q9SZC1
 
 At3g42950   Arabidopsis thaliana CAB86682.1
AAK91400.1
AAN28906.1
AEE77760.1
CAW63331.1
CAW63352.1
CBC45209.1
CBC45251.1
NP_189881.1
Q8H1N7
Q9M1L0
 
 At5g14650   Arabidopsis thaliana CAB87632.1
AED92058.1
ANM69799.1
NP_196969.1
Q9LYJ5  
 At3g16850   Arabidopsis thaliana AAK59579.1
AAM44924.1
AAM62920.1
AEE75873.1
BAA95779.1
CAW63330.1
CAW63354.1
CAW63357.1
CBC45207.1
CBC45254.1
CBC45260.1
NP_188308.1
Q8LE01
Q94C86
Q9LRY8
 
 At1g78400   Arabidopsis thaliana AAF71796.1
AEE36101.1
CAX05835.1
CAX05862.1
CBD29076.1
CBD29103.1
NP_177961.1
Q9M9F6  
 endo-polygalacturonase (At1g48100) 3.2.1.15 Arabidopsis thaliana AAF79535.1
AAK92733.1
AAK95305.1
AAM20001.1
AEE32248.1
NP_175244.1
Q949Z1
Q94EH4
Q9LNG3
 
 At1g19170   Arabidopsis thaliana AAN15350.1
AAF82228.1
AAL91166.1
AEE29813.1
CAW63328.1
CAW63355.1
CAW63356.1
CBC45203.1
CBC45256.1
CBC45258.1
NP_173351.1
Q8RXF9
Q9LMA9
 
 At3g15720   Arabidopsis thaliana BAB02303.1
AEE75718.1
AEE75719.1
ANM65726.1
ANM65727.1
NP_188193.1
NP_566524.1
Q9LW07  
 At1g02460   Arabidopsis thaliana AAG10640.1
AAY56453.1
AEE27432.1
NP_563654.1
Q9FWX5  
 At5g48140   Arabidopsis thaliana AAP81805.1
AED95623.1
BAA96994.1
BAC43278.1
NP_199625.1
Q9LUB8  
 At1g56710   Arabidopsis thaliana AAG09093.1
AEE33427.1
NP_176064.1
Q9FXC1  
 At2g15450   Arabidopsis thaliana AAD22279.1
AEC06402.1
CAX05836.1
CBD29077.1
NP_179147.1
Q9SJN7  
 At2g15460   Arabidopsis thaliana AAD17390.2
AAM15318.1
AEC06403.1
CAX05837.1
CBD29078.1
NP_179148.1
Q8S8F3  
 At2g15470   Arabidopsis thaliana AAD17391.1
AAM15317.1
AEC06404.1
CAX05838.1
CAX05866.1
CBD29079.1
CBD29107.1
Q9ZQG5  
 At5g17200   Arabidopsis thaliana BAB10507.1
AED92395.1
NP_197222.1
Q9FFI9  
 At5g39910   Arabidopsis thaliana BAB10216.1
AED94490.1
NP_198807.1
Q9FLE3  
 At1g43100   Arabidopsis thaliana AAG50824.1
AAG29730.1
AEE31946.1
CAX05834.1
CBD29075.1
NP_175005.1
Q9C8C2  
 At1g43080   Arabidopsis thaliana AAG50821.1
AAG29727.1
AAY78640.1
AEE31944.1
CAX05832.1
CBD29073.1
NP_175003.1
Q9C8C4  
 At1g43090   Arabidopsis thaliana AAG50820.1
AAG29726.1
AEE31945.1
CAX05833.1
CBD29074.1
NP_175004.1
Q9C8C3  
 glycoside hydrolase family 28   Aretaon asperrimus ANJ43582.1    
 glycoside hydrolase family 28   Aretaon asperrimus ANJ43580.1    
 glycoside hydrolase family 28   Aretaon asperrimus ANJ43572.1    
 glycoside hydrolase family 28   Aretaon asperrimus ANJ43570.1    
 glycoside hydrolase family 28   Aretaon asperrimus ANJ43577.1    
 glycoside hydrolase family 28   Aretaon asperrimus ANJ43575.1    
 glycoside hydrolase family 28   Aretaon asperrimus ANJ43574.1    
 glycoside hydrolase family 28   Aretaon asperrimus ANJ43571.1    
 glycoside hydrolase family 28   Aretaon asperrimus ANJ43581.1    
 glycoside hydrolase family 28   Aretaon asperrimus ANJ43579.1    
 glycoside hydrolase family 28   Aretaon asperrimus ANJ43578.1    
 glycoside hydrolase family 28   Aretaon asperrimus ANJ43576.1    
 glycoside hydrolase family 28   Aretaon asperrimus ANJ43573.1    
 ORF (fragment)   Aristolochia tagala AIU50423.1    
 ORF (fragment)   Artemisia annua AIU50434.1    
 EGX52986.1   Arthrobotrys oligospora ATCC 24927 EGX52986.1    
 EGX52955.1   Arthrobotrys oligospora ATCC 24927 EGX52955.1    
 EGX52752.1   Arthrobotrys oligospora ATCC 24927 EGX52752.1    
 EGX51533.1   Arthrobotrys oligospora ATCC 24927 EGX51533.1    
 EGX50103.1   Arthrobotrys oligospora ATCC 24927 EGX50103.1    
 EGX45557.1   Arthrobotrys oligospora ATCC 24927 EGX45557.1    
 EGX44124.1   Arthrobotrys oligospora ATCC 24927 EGX44124.1    
 ORF (fragment)   Asparagus officinalis AIU50422.1    
 polygalacturonase 1 / polygalacturonase EPG M2 (Pg1;ePOL;E-PGALUSP) 3.2.1.15 Aspergillus aculeatus CAE46193.1 O74213  
 polygalacturonase 2 (Pg2;PG2) 3.2.1.15 Aspergillus aculeatus CAE46194.1 Q70HJ4  
 polygalacturonase 3 (Pg3) 3.2.1.15 Aspergillus aculeatus CAE46195.1 Q70HJ3  
 endo-polygalacturonase   Aspergillus aculeatus BCC17849 ATA58400.1    
 polygalacturonase (Pga1) 3.2.1.15 Aspergillus aculeatus KSM 510 AAC23565.1 O74213 1IA5[A]
1IB4[A,B]
 rhamnogalacturonase A (RhgA) 3.2.1.171 Aspergillus aculeatus KSM 510 / CBS 115.80 AAA64367.1
AAB35485.1
CAA58507.2
CAB58937.1
CAB58938.1
Q00001 1RMG[A]
 protopectinase-AS (Ppas) 3.2.1.15 Aspergillus awamori BAA95408.1 Q9P358  
 polygalacturonase-X2 (Pgx2) 3.2.1.15 Aspergillus awamori BAA95407.1 Q9P359  
 exo-polygalacturonase (Pg4)   Aspergillus fischeri ALC76135.1    
 endopolygalacturonase (Pg5)   Aspergillus fischeri ALC76136.1    
 exo-polygalacturonase (NfPG4;NFIA_049320) 3.2.1.67 Aspergillus fischeri NRRL 181 EAW15592.1
XP_001257489.1
   
 endo-polygalacturonase (NfPG5;NFIA_008150) 3.2.1.15 Aspergillus fischeri NRRL 181 EAW22138.1
XP_001264035.1
   
 polygalacturonase A (PecA;P2c) 3.2.1.15 Aspergillus flavus 70 AAA85279.1 P41749  
 polygalacturonase B (PecB) 3.2.1.15 Aspergillus flavus 70 AAA85280.1 P41750  
 polygalacturonase (Pg2)   Aspergillus fumigatus ASO96840.1    
 polygalacturonase (Pg1)   Aspergillus fumigatus ASO96839.1    
 xylogalacturonase (Afu8g06890) 3.2.1.- Aspergillus fumigatus Af293 EAL85450.1 Q4WBT4  
 polygalacturonase (PgaB)   Aspergillus kawachii BAE94655.1 Q1HAY5  
 polygalacturonase A / I (PgaA;Pg1;PG I) 3.2.1.15 Aspergillus kawachii IFO 4308 BAC10596.1 Q8NK99  
 polygalacturonase B (PgaB)   Aspergillus kawachii IFO 4308 BAC10597.1 Q8NK98  
 exopolygalacturonase   Aspergillus nidulans AAO61898.1 Q873X6  
 AN8891.2   Aspergillus nidulans FGSC A4 EAA64105.1 Q873X6  
 AN3389.2   Aspergillus nidulans FGSC A4 EAA63357.1 C8VHN3
Q5B7U1
 
 exo-polygalacturonase (AN8761.2) 3.2.1.67 Aspergillus nidulans FGSC A4 EAA60554.1
ABF50895.1
Q5ASG9  
 AN10274.3   Aspergillus nidulans FGSC A4 CBF86383.1
EAA63863.1
   
 rhamnogalacturonase (AN9134.2) 3.2.1.171 Aspergillus nidulans FGSC A4 ABF50898.1
EAA61967.1
Q5ARE6  
 endo-polygalacturonase (PG1;AN4372.2) 3.2.1.15 Aspergillus nidulans FGSC A4 ABF50868.1
EAA60289.1
Q5B508  
 exo-polygalacturonase (AN9045.2) 3.2.1.67 Aspergillus nidulans FGSC A4 EAA64377.1
ABF50897.1
Q5ARN5  
 endo-polygalacturonase (AN8327.2) 3.2.1.15 Aspergillus nidulans FGSC A4 EAA66950.1
ABF50893.1
Q5ATQ3  
 AN6656.2   Aspergillus nidulans FGSC A4 EAA58185.1 Q5AYH4  
 exo-polygalacturonase (PgxC)   Aspergillus niger CBS 120.49 / N400 ABD14402.1 Q27UB0
Q2EQQ3
 
 rhamnogalacturonase A (RgxA)   Aspergillus niger CBS 120.49 / N400 ABD14403.1 Q2EQQ2  
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