Glycoside Hydrolase Family 28

Activities in FamilyXylogalacturonan hydrolase (EC 3.2.1.-);
Endo-polygalacturonase (EC 3.2.1.15);
Rhamnogalacturonase (EC 3.2.1.171);
Rhamnogalacturonan α-1,2-galacturonohydrolase (EC 3.2.1.173);
Galacturonan α-1,4-galacturonidase (EC 3.2.1.67);
Exo-poly-α-digalacturonosidase (EC 3.2.1.82);
Mechanism Inverting a
ClanGH-N
3D Structure Statusparallel β-helix
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorAsp
External resourcesCAZypedia; HOMSTRAD; PROSITE;
Commercial Enzyme Provider(s)MEGAZYME;
Statistics GenBank accession (18584); Uniprot accession (178); PDB accession (25); 3D entries (20); cryst (3)
| 1 | ... | 24 | 25 | 26 | 27 | 28 | 29 | 30 | 31 | 32 | ... | 127 |
Eukaryota
Protein Name EC#OrganismGenBank UniprotPDB/3D
 1084547   Aspergillus niger ATCC 1015 v4 (Aspni7)      
 exo-polygalacturonase (PgxC)   Aspergillus niger CBS 120.49 / N400 ABD14402.1    
 rhamnogalacturonase A (RgxA)   Aspergillus niger CBS 120.49 / N400 ABD14403.1    
 RhgF   Aspergillus niger CBS 120.49 / N400 ABD67155.1    
 RhgE   Aspergillus niger CBS 120.49 / N400 ABD67156.1    
 endo-polygalacturonase D (PgaD) 3.2.1.15 Aspergillus niger CBS 120.49 / N400 CAB72931.1 Q9P4W2  
 endo-polygalacturonase A (PgaA;PGA) 3.2.1.15 Aspergillus niger CBS 120.49 / N400 CAB72125.1 Q9P4W4  
 endo-polygalacturonase B (PgaB) 3.2.1.15 Aspergillus niger CBS 120.49 / N400 CAB72126.1
AAR39811.1
Q9P4W3  
 polygalacturonase (PgaE) 3.2.1.15 Aspergillus niger CBS 120.49 / N400 CAA74744.1 O42809  
 endopolygalacturonase-1 / I (PgaI;PgaA;AnPGI) 3.2.1.15 Aspergillus niger CBS 120.49 / N400 CAA41693.1 P26213 1NHC[A,B,C,D,E,F]
 endopolygalacturonase-2 / II (PgaII;PgaB;AnPGII) 3.2.1.15 Aspergillus niger CBS 120.49 / N400 CAA41694.1 P26214 1CZF[A,B]
 endopolygalacturonase C (PgaC) 3.2.1.15 Aspergillus niger CBS 120.49 / N400 CAA45707.1 Q12554  
 rhamnogalacturonase A (RhgA) 3.2.1.171 Aspergillus niger CBS 120.49 / N400 CAA63911.1 P87160  
 rhamnogalacturonase B (RhgB) 3.2.1.171 Aspergillus niger CBS 120.49 / N400 CAA63912.1 P87161  
 An12g07500 (PgaX)   Aspergillus niger CBS 513.88 ABD61562.1
CAK46374.1
   
 exo-xylogalacturonan hydrolase (PgxA;An11g04040) 3.2.1.- Aspergillus niger CBS 513.88 ABD61563.1
CAK48389.1
A2QW66
Q27UB2
 
 exopolygalacturonase (PgxB;An03g0674) 3.2.1.67 Aspergillus niger CBS 513.88 ABD61564.1
CAK38430.1
A2QHG0
Q27UB1
 
 exopolygalacturonase (PgxC;An02g12450) 3.2.1.67 Aspergillus niger CBS 513.88 ABD61565.1
CAK44512.1
A2QEW2
Q27UB0
 
 An01g14650 (RgxA)   Aspergillus niger CBS 513.88 ABD61566.1
CAK44162.1
   
 An03g02080 (RgxB)   Aspergillus niger CBS 513.88 ABD61567.1
CAK38178.1
   
 RgxC;An18g0410   Aspergillus niger CBS 513.88 ABD61568.1
CAK43283.1
   
 An06g02070 (RhgC)   Aspergillus niger CBS 513.88 ABD61569.1
CAK48050.1
   
 An11g06320 (RhgD)   Aspergillus niger CBS 513.88 ABD61570.1
CAK96934.1
   
 An04g09700 (XghA)   Aspergillus niger CBS 513.88 ABD61571.1
CAK47977.1
   
 An07g01000 (RhgF)   Aspergillus niger CBS 513.88 ABD67157.1
CAK96548.1
   
 An11g08700 (RhgE)   Aspergillus niger CBS 513.88 ABD67158.1
CAK46056.1
   
 An01g11520 (PgaI) 3.2.1.15 Aspergillus niger CBS 513.88 CAK44054.1 A2QAH3  
 An01g14670 (PgaE) 3.2.1.15 Aspergillus niger CBS 513.88 CAK44164.1 A2QBB6  
 An02g04900 (PgaB) 3.2.1.15 Aspergillus niger CBS 513.88 CAK47667.1 A2QCV8  
 An05g02440 (PgaC)   Aspergillus niger CBS 513.88 CAK44905.1    
 An09g03260 (PgaD)   Aspergillus niger CBS 513.88 CAK40265.1    
  rhamnogalacturonase (RhgA;An12g00950)   Aspergillus niger CBS 513.88 CAK41025.1    
 An14g04200 (RhgB)   Aspergillus niger CBS 513.88 CAK48512.1    
 An15g05370 (PgaII)   Aspergillus niger CBS 513.88 CAK42510.1    
 An16g06990 (PgaA)   Aspergillus niger CBS 513.88 CAK47020.1
A2R8F8.1
   
 158660   Aspergillus niger CBS 513.88 (Aspni_DSM_1)      
 167051   Aspergillus niger CBS 513.88 (Aspni_DSM_1)      
 164080   Aspergillus niger CBS 513.88 (Aspni_DSM_1)      
 163648   Aspergillus niger CBS 513.88 (Aspni_DSM_1)      
 156180   Aspergillus niger CBS 513.88 (Aspni_DSM_1)      
 166203   Aspergillus niger CBS 513.88 (Aspni_DSM_1)      
 157762   Aspergillus niger CBS 513.88 (Aspni_DSM_1)      
 159651   Aspergillus niger CBS 513.88 (Aspni_DSM_1)      
 164433   Aspergillus niger CBS 513.88 (Aspni_DSM_1)      
 162788   Aspergillus niger CBS 513.88 (Aspni_DSM_1)      
 168924   Aspergillus niger CBS 513.88 (Aspni_DSM_1)      
 159957   Aspergillus niger CBS 513.88 (Aspni_DSM_1)      
 160173   Aspergillus niger CBS 513.88 (Aspni_DSM_1)      
 165048   Aspergillus niger CBS 513.88 (Aspni_DSM_1)      
 160335   Aspergillus niger CBS 513.88 (Aspni_DSM_1)      
 156473   Aspergillus niger CBS 513.88 (Aspni_DSM_1)      
 163864   Aspergillus niger CBS 513.88 (Aspni_DSM_1)      
 157015   Aspergillus niger CBS 513.88 (Aspni_DSM_1)      
 156471   Aspergillus niger CBS 513.88 (Aspni_DSM_1)      
 158218   Aspergillus niger CBS 513.88 (Aspni_DSM_1)      
 rhamnogalacturonase A1 (RhgA1)   Aspergillus niger CTM10548 AIN75624.1    
 endogalacturonase (PgaD)   Aspergillus niger JL-15 WEP24662.1    
 endogalacturonase A (PgaA) 3.2.1.15 Aspergillus niger JL-15 AGV40780.1 T2D2W8  
 endogalacturonase B (PgaB)   Aspergillus niger JL-15 AIT52328.1    
 polygalacturonase (PgaI)   Aspergillus niger M1 ACS44814.1    
 2571   Aspergillus niger NRRL3 (Aspni_NRRL3_1)      
 263   Aspergillus niger NRRL3 (Aspni_NRRL3_1)      
 2835   Aspergillus niger NRRL3 (Aspni_NRRL3_1)      
 7469   Aspergillus niger NRRL3 (Aspni_NRRL3_1)      
 8281   Aspergillus niger NRRL3 (Aspni_NRRL3_1)      
 5260   Aspergillus niger NRRL3 (Aspni_NRRL3_1)      
 10559   Aspergillus niger NRRL3 (Aspni_NRRL3_1)      
 3144   Aspergillus niger NRRL3 (Aspni_NRRL3_1)      
 5859   Aspergillus niger NRRL3 (Aspni_NRRL3_1)      
 9126   Aspergillus niger NRRL3 (Aspni_NRRL3_1)      
 9450   Aspergillus niger NRRL3 (Aspni_NRRL3_1)      
 4000   Aspergillus niger NRRL3 (Aspni_NRRL3_1)      
 11790   Aspergillus niger NRRL3 (Aspni_NRRL3_1)      
 9810   Aspergillus niger NRRL3 (Aspni_NRRL3_1)      
 4303   Aspergillus niger NRRL3 (Aspni_NRRL3_1)      
 953   Aspergillus niger NRRL3 (Aspni_NRRL3_1)      
 9623   Aspergillus niger NRRL3 (Aspni_NRRL3_1)      
 6782   Aspergillus niger NRRL3 (Aspni_NRRL3_1)      
 8805   Aspergillus niger NRRL3 (Aspni_NRRL3_1)      
 2832   Aspergillus niger NRRL3 (Aspni_NRRL3_1)      
 8631   Aspergillus niger NRRL3 (Aspni_NRRL3_1)      
 polygalacturonase M1 (PG) 3.2.1.15 Aspergillus niger RH5344 CAA37085.1
CAA02197.1
CAA02200.1
CAA38085.1
P0CU55  
 endo-polygalacturonase   Aspergillus niger SC323 AJD09825.1    
 330257   Aspergillus niger van Tieghem ATCC 13496 v1.0 (Aspni_bvT_1)      
 356545   Aspergillus niger van Tieghem ATCC 13496 v1.0 (Aspni_bvT_1)      
 322702   Aspergillus niger van Tieghem ATCC 13496 v1.0 (Aspni_bvT_1)      
 355551   Aspergillus niger van Tieghem ATCC 13496 v1.0 (Aspni_bvT_1)      
 330493   Aspergillus niger van Tieghem ATCC 13496 v1.0 (Aspni_bvT_1)      
 354149   Aspergillus niger van Tieghem ATCC 13496 v1.0 (Aspni_bvT_1)      
 340534   Aspergillus niger van Tieghem ATCC 13496 v1.0 (Aspni_bvT_1)      
 240324   Aspergillus niger van Tieghem ATCC 13496 v1.0 (Aspni_bvT_1)      
 368542   Aspergillus niger van Tieghem ATCC 13496 v1.0 (Aspni_bvT_1)      
 292111   Aspergillus niger van Tieghem ATCC 13496 v1.0 (Aspni_bvT_1)      
 306785   Aspergillus niger van Tieghem ATCC 13496 v1.0 (Aspni_bvT_1)      
 295514   Aspergillus niger van Tieghem ATCC 13496 v1.0 (Aspni_bvT_1)      
 275664   Aspergillus niger van Tieghem ATCC 13496 v1.0 (Aspni_bvT_1)      
 286011   Aspergillus niger van Tieghem ATCC 13496 v1.0 (Aspni_bvT_1)      
 3040   Aspergillus niger van Tieghem ATCC 13496 v1.0 (Aspni_bvT_1)      
 239090   Aspergillus niger van Tieghem ATCC 13496 v1.0 (Aspni_bvT_1)      
 362259   Aspergillus niger van Tieghem ATCC 13496 v1.0 (Aspni_bvT_1)      
Top


Last update: 2024-03-18 © Copyright 1998-2024
AFMB - CNRS - Université d'Aix-Marseille