Glycoside Hydrolase Family 28

Activities in FamilyXylogalacturonan hydrolase (EC 3.2.1.-);
Endo-polygalacturonase (EC 3.2.1.15);
Rhamnogalacturonase (EC 3.2.1.171);
Rhamnogalacturonan α-1,2-galacturonohydrolase (EC 3.2.1.173);
Galacturonan α-1,4-galacturonidase (EC 3.2.1.67);
Exo-poly-α-digalacturonosidase (EC 3.2.1.82);
Mechanism Inverting a
ClanGH-N
3D Structure Statusparallel β-helix
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorAsp
External resourcesCAZypedia; HOMSTRAD; PROSITE;
Commercial Enzyme Provider(s)MEGAZYME;
Statistics GenBank accession (18584); Uniprot accession (178); PDB accession (25); 3D entries (20); cryst (3)
| 1 | ... | 24 | 25 | 26 | 27 | 28 | 29 | 30 | 31 | 32 | ... | 99 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 CMS2178   Clavibacter sepedonicus ATCC 33113 CAQ02272.1    
 LRE50_09960 (fragment)   Clavibacter sepedonicus K496 UUK64617.1    
 KYT88_15050   Clavibacter sp. A6099 UKF25008.1    
 JYE50_13540   Clostridiales bacterium WTE2008 QUA52702.1    
 JNO48_09685 (fragment)   Clostridiales bacterium XBB3002 QTE67472.1    
 JNO48_03365   Clostridiales bacterium XBB3002 QTE68963.1    
 JNO48_07870   Clostridiales bacterium XBB3002 QTE67135.1    
 CAC0355   Clostridium acetobutylicum ATCC 824 AAK78335.1
NP_346995.1
   
 CAC3684   Clostridium acetobutylicum ATCC 824 AAK81605.1
NP_350265.1
   
 SMB_G3725 (PehX)   Clostridium acetobutylicum DSM 1731 AEI34072.1    
 SMB_G0363 (PgL)   Clostridium acetobutylicum DSM 1731 AEI33761.1    
 CEA_G0365   Clostridium acetobutylicum EA 2018 ADZ19404.1    
 CEA_G3691   Clostridium acetobutylicum EA 2018 ADZ22728.1    
 DK921_11535   Clostridium acetobutylicum LJ4 AWV80720.1    
 DK921_08130   Clostridium acetobutylicum LJ4 AWV80060.1    
 NQ535_25030   [Clostridium] asparagiforme DSM 15981 UWO76026.1    
 CLAUR_023610   Clostridium aurantibutyricum DSM 793 URZ02364.1    
 CLAUR_021790   Clostridium aurantibutyricum DSM 793 URZ02182.1    
 CLAUR_028910 (Pehx_3) (fragment)   Clostridium aurantibutyricum DSM 793 URZ02857.1    
 CLAUR_028900 (Pehx_2) (fragment)   Clostridium aurantibutyricum DSM 793 URZ02856.1    
 CLAUR_027690 (Pehx_1)   Clostridium aurantibutyricum DSM 793 URZ02744.1    
 CAETHG_0930   Clostridium autoethanogenum DSM 10061 AGY75155.1
ALU35327.1
   
 OD350_28075 (fragment)   Clostridium beijerinckii CloBei18h UYZ35987.1    
 HLV60_09200   Clostridium butyricum 16-3 QJU44532.1    
 FBD76_15410   Clostridium butyricum 4-1 QCJ07683.1    
 Q9978_11130   Clostridium butyricum CBM588 WLS66826.1    
 KDJ93_07290   Clostridium butyricum CBUT QUF84700.1    
 NPD4_2318   Clostridium butyricum CDC_51208 APF22263.1    
 HNS01_07725   Clostridium butyricum CFSA-TJ-E UTY52987.1    
 EBL75_12200   Clostridium butyricum CFSA3987 QGH22295.1    
 EBQ27_12205   Clostridium butyricum CFSA3989 QGH26334.1    
 QVH08_08650   Clostridium butyricum DKU-11 WJV35658.1    
 JZY05_07650   Clostridium butyricum DS501 QSX04248.1    
 FF104_10005   Clostridium butyricum DSM 10702 QMW91280.1    
 ATD26_10365   Clostridium butyricum JKY6D1 ALS17253.1    
 ATN24_11420   Clostridium butyricum KNU-L09 ALP90718.1    
 Cbu04g_15460   Clostridium butyricum NBRC 13949 BBK76538.1    
 DRB99_09415   Clostridium butyricum S-45-5 AXB85178.1    
 BBB49_10050   Clostridium butyricum TK520 AOR94407.1    
 AZ909_09870   Clostridium butyricum TOA ANF14341.1    
 O4N14_07680   Clostridium butyricum WQ1 WBQ00495.1    
 Ccar_10400   Clostridium carboxidivorans P7 AKN31240.1    
 endopolygalacturonase (Epg28A)   Clostridium cellulovorans BAV13170.1    
 Clocel_2254   Clostridium cellulovorans 743B ADL51993.1    
 LOR37_08720   Clostridium estertheticum CEST001 WBL48726.1    
 LL033_03800   Clostridium estertheticum CF002 WAG56372.1    
 LL037_09785   Clostridium estertheticum CF003 WAG67403.1    
 LL037_12090   Clostridium estertheticum CF003 WAG67832.1    
 KTC95_01130   Clostridium estertheticum CF004 WLC88877.1    
 KTC96_03935   Clostridium estertheticum CF005 WLC71192.1    
 KTC98_11165   Clostridium estertheticum CF007 WLC81724.1    
 KTC97_14000   Clostridium estertheticum CF008 WLC83204.1    
 LL038_12910   Clostridium estertheticum CF009 WAG58561.1    
 LL038_10710   Clostridium estertheticum CF009 WAG62664.1    
 LL065_15655 (fragment)   Clostridium estertheticum CF016 WAG43520.1    
 LL065_17725   Clostridium estertheticum CF016 WAG40091.1    
 LL127_00330   Clostridium estertheticum CM034 WAG46048.1    
 LL032_02665   Clostridium estertheticum DSM 14864 WAG74377.1    
 A7L45_05315   Clostridium estertheticum subsp. estertheticum DSM 8809 APC39525.1    
 CLFE_040580   Clostridium felsineum DSM 794 URZ18003.1    
 CLFE_042240   Clostridium felsineum DSM 794 URZ18169.1    
 CLFE_000630 (Pehx_1)   Clostridium felsineum DSM 794 URZ14087.1    
 CLFE_001810 (Pehx_2)   Clostridium felsineum DSM 794 URZ14196.1    
 CLFE_001820 (Pehx_3)   Clostridium felsineum DSM 794 URZ14197.1    
 BJL90_09320   Clostridium formicaceticum ATCC 27076 AOY76083.1    
 CLFO_07670 (PgL)   Clostridium formicaceticum DSM 92 ARE86445.1    
 psyc5s11_19170 (PehX)   Clostridium gelidum C5S11 BCZ45850.1    
 psyc5s11_28310   Clostridium gelidum C5S11 BCZ46764.1    
 CLJU_c29360   Clostridium ljungdahlii DSM 13528 ADK15984.1    
 CLROS_042130 (Pehx_1)   Clostridium roseum DSM 6424 URZ08819.1    
 CLROS_043340 (Pehx_3)   Clostridium roseum DSM 6424 URZ08931.1    
 CLROS_042140 (Pehx_2)   Clostridium roseum DSM 6424 URZ08820.1    
 CLROS_003880   Clostridium roseum DSM 6424 URZ05064.1    
 CLROS_002080   Clostridium roseum DSM 6424 URZ04884.1    
 CROST_002390 (Pehx_3)   Clostridium roseum DSM 7320 URZ09559.1    
 CROST_001180 (Pehx_1)   Clostridium roseum DSM 7320 URZ09447.1    
 CROST_001190 (Pehx_2)   Clostridium roseum DSM 7320 URZ09448.1    
 CROST_006330   Clostridium roseum DSM 7320 URZ09925.1    
 CROST_008130   Clostridium roseum DSM 7320 URZ10105.1    
 CSACC_18970 (PehX)   Clostridium saccharobutylicum BAS/B3/SW/136 AQS00081.1    
 CLSA_c18950 (PehX)   Clostridium saccharobutylicum DSM 13864 AGX42880.1    
 CLOSACC_18970 (PehX)   Clostridium saccharobutylicum NCP 195 AQS14064.1    
 CLOSC_18900 (PehX)   Clostridium saccharobutylicum NCP 200 AQR90175.1    
 CLOBY_20070 (PehX)   Clostridium saccharobutylicum NCP 258 AQS09868.1    
 Cspa_c33380   Clostridium saccharoperbutylacetonicum N1-4(HMT) AGF57099.1    
 Cspa_c52840   Clostridium saccharoperbutylacetonicum N1-4(HMT) AGF59029.1    
 CLSAP_31050 (Pgl_2)   Clostridium saccharoperbutylacetonicum N1-504 AQR95789.1    
 B5S50_04515   Clostridium sp. 001 QXE18159.1    
 ONV75_10950   Clostridium sp. LQ25 UZT05106.1    
 SAMN02745906_0330   [Clostridium] sphenoides JCM 1415 ATCC 19403 SET55359.1    
 SAMN02745906_3046   [Clostridium] sphenoides JCM 1415 ATCC 19403 SET92437.1    
 HH215_27140   Cohnella herbarum MFER-1 QJD86476.1    
 HH215_18205   Cohnella herbarum MFER-1 QJD84920.1    
 HH215_32645   Cohnella herbarum MFER-1 QJD87459.1    
 HH215_18200   Cohnella herbarum MFER-1 QJD84919.1    
 J4772_04585   Cohnella sp. LGH QTH43708.1    
 J4772_08865   Cohnella sp. LGH QTH44486.1    
 J4772_31190   Cohnella sp. LGH QTH41928.1    
 J4772_26855   Cohnella sp. LGH QTH41144.1    
 J4772_26850   Cohnella sp. LGH QTH41143.1    
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