Glycoside Hydrolase Family 28

Activities in FamilyXylogalacturonan hydrolase (EC 3.2.1.-);
Endo-polygalacturonase (EC 3.2.1.15);
Rhamnogalacturonase (EC 3.2.1.171);
Rhamnogalacturonan α-1,2-galacturonohydrolase (EC 3.2.1.173);
Galacturonan α-1,4-galacturonidase (EC 3.2.1.67);
Exo-poly-α-digalacturonosidase (EC 3.2.1.82);
Mechanism Inverting a
ClanGH-N
3D Structure Statusparallel β-helix
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorAsp
External resourcesCAZypedia; HOMSTRAD; PROSITE;
Commercial Enzyme Provider(s)MEGAZYME;
Statistics GenBank accession (18863); Uniprot accession (179); PDB accession (25); 3D entries (20); cryst (3)
| 1 | ... | 21 | 22 | 23 | 24 | 25 | 26 | 27 | 28 | 29 | ... | 101 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 AC233_30355   Burkholderia sp. HB1 ALE58799.1    
 DCN14_14240   Burkholderia sp. IDO3 AXK63678.1    
 DM992_33680 (fragment)   Burkholderia sp. JP2-270 AWV04363.1    
 DM992_25660   Burkholderia sp. JP2-270 AWV02759.1    
 LFL97_30015   Burkholderia sp. JSH-S8 WGS44821.1    
 FFI87_017150   Burkholderia sp. KBS0801 QDW52083.1    
 MYA_3508   Burkholderia sp. KJ006 AFJ87867.1    
 MYA_4017 (fragment)   Burkholderia sp. KJ006 AFJ88375.1    
 MBR110_23795   Burkholderia sp. MBR-1 QMI48419.1    
 FPJ27_19420   Burkholderia sp. MS455 QRR08354.1    
 WS87_00875   Burkholderia sp. MSMB0856 AOJ85321.1    
 WS87_00475   Burkholderia sp. MSMB0856 AOJ85264.1    
 WS54_30235   Burkholderia sp. NRF60-BP8 AOI80642.1    
 WS54_11950   Burkholderia sp. NRF60-BP8 AOI76932.1    
 LXM88_03030   Burkholderia sp. S-53 UXU85354.1    
 LXM88_29545   Burkholderia sp. S-53 UXU92287.1    
 BTHE68_57700   Burkholderia sp. THE68 BBU32036.1    
 BTHE68_60500 (PglA)   Burkholderia sp. THE68 BBU32316.1    
 BSFP_033790   Burkholderia stabilis FERMP-21014 BAX60518.1    
 BSFP_067790   Burkholderia stabilis FERMP-21014 BAX63906.1    
 J4D21_15525   Burkholderia vietnamiensis AU2011 QTK87079.1    
 A8H33_07480   Burkholderia vietnamiensis FDAARGOS_239 AVR13275.1    
 Bcep1808_3851   Burkholderia vietnamiensis G4 ABO56834.1    
 AK36_4860   Burkholderia vietnamiensis LMG 10929 AJY03121.1    
 P4G95_24145   Burkholderia vietnamiensis LMG16232 WHU94440.1    
 MNO13_12690   Buttiauxella ferragutiae H4-C11 UNK59276.1    
 MNO13_06025   Buttiauxella ferragutiae H4-C11 UNK62496.1    
 D8682_21670   Buttiauxella sp. 3AFRM03 AYN29361.1    
 D8682_02795   Buttiauxella sp. 3AFRM03 AYN26013.1    
 RHD99_05930   Buttiauxella sp. R73 WMY75496.1    
 RHD99_15810   Buttiauxella sp. R73 WMY72926.1    
 OH773_14080   Buttiauxella sp. WJP83 WBM69305.1    
 OH773_05455   Buttiauxella sp. WJP83 WBM71698.1    
 WAA20_18580   Butyrivibrio fibrisolvens D1 WWZ59165.1    
 WAA20_02355   Butyrivibrio fibrisolvens D1 WWZ59866.1    
 bhn_I1952   Butyrivibrio hungatei MB2003 AOZ96985.1    
 bhn_I2679   Butyrivibrio hungatei MB2003 AOZ97711.1    
 bpr_I2505   Butyrivibrio proteoclasticus B316 ADL35238.1    
 bpr_I2854   Butyrivibrio proteoclasticus B316 ADL35584.1    
 Pr1d_27150 (PehX)   Bythopirellula goksoeyrii Pr1d QEG35416.1    
 Pr1d_53300 (PehA)   Bythopirellula goksoeyrii Pr1d QEG37982.1    
 Pr1d_37510 (Pgl_2)   Bythopirellula goksoeyrii Pr1d QEG36437.1    
 Pr1d_30770 (Pgl_1)   Bythopirellula goksoeyrii Pr1d QEG35771.1    
 BRPE64_DCDS07290   Caballeronia insecticola RPE64 BAN27665.1    
 BRPE64_DCDS10230   Caballeronia insecticola RPE64 BAN27959.1    
 JYK05_17815   Caballeronia sp. M1242 QSN62993.1    
 NK8_56590   Caballeronia sp. NK8 BCQ27470.1    
 NK8_54140   Caballeronia sp. NK8 BCQ27225.1    
 Calla_0050   Caldicellulosiruptor acetigenus 6A AEM72745.1    
 Calla_0145   Caldicellulosiruptor acetigenus 6A AEM72830.1    
 Calla_0381   Caldicellulosiruptor acetigenus 6A AEM73047.1    
 OTK01_000157   Caldicellulosiruptor acetigenus DSM 7040 WAM36397.1    
 Calkr_1976   Caldicellulosiruptor acetigenus I77R1B ADQ41451.1    
 Calkr_2305   Caldicellulosiruptor acetigenus I77R1B ADQ41758.1    
 Athe_2380 / Cbes2380   Caldicellulosiruptor bescii DSM 6725 ACM61449.1    
 Athe_1569   Caldicellulosiruptor bescii DSM 6725 ACM60667.1    
 ELD05_01685   Caldicellulosiruptor changbaiensis CBS-Z AZT89493.1    
 ELD05_11635   Caldicellulosiruptor changbaiensis CBS-Z AZT91228.1    
 CaldiYA01_01260   Caldicellulosiruptor diazotrophicus YA01 BCS80166.1    
 Calhy_0137   Caldicellulosiruptor hydrothermalis 108 ADQ05898.1    
 Calhy_1166   Caldicellulosiruptor hydrothermalis 108 ADQ06886.1    
 Calkro_0152   Caldicellulosiruptor kronotskyensis 2002 ADQ45068.1    
 Calkro_0342   Caldicellulosiruptor kronotskyensis 2002 ADQ45245.1    
 OTK00_002122   Caldicellulosiruptor morganii DSM 8990 WAM33610.1    
 OTJ99_000423 (fragment)   Caldicellulosiruptor naganoensis DSM 8991 WAM31938.1    
 OTJ99_000424 (fragment)   Caldicellulosiruptor naganoensis DSM 8991 WAM31939.1    
 COB47_2144   Caldicellulosiruptor obsidiansis OB47 ADL43391.1    
 COB47_0984   Caldicellulosiruptor obsidiansis OB47 ADL42285.1    
 Calow_2114   Caldicellulosiruptor owensensis OL ADQ05623.1    
 Csac_0361   Caldicellulosiruptor saccharolyticus DSM 8903 ABP66002.1    
 Csac_0664   Caldicellulosiruptor saccharolyticus DSM 8903 ABP66284.1    
 J4771_07205   Candidatus Kaistella beijingensis PM-38 UBB88669.1    
 J4771_07130   Candidatus Kaistella beijingensis PM-38 UBB91032.1    
 Acid_0671   Candidatus Solibacter usitatus Ellin6076 ABJ81672.1    
 Acid_0672   Candidatus Solibacter usitatus Ellin6076 ABJ81673.1    
 Acid_0674   Candidatus Solibacter usitatus Ellin6076 ABJ81675.1    
 Acid_1250   Candidatus Solibacter usitatus Ellin6076 ABJ82244.1    
 Acid_2983   Candidatus Solibacter usitatus Ellin6076 ABJ83967.1    
 Acid_3985   Candidatus Solibacter usitatus Ellin6076 ABJ84952.1    
 Acid_4057   Candidatus Solibacter usitatus Ellin6076 ABJ85022.1    
 Acid_4847   Candidatus Solibacter usitatus Ellin6076 ABJ85806.1    
 Acid_6868   Candidatus Solibacter usitatus Ellin6076 ABJ87782.1    
 Acid_7770 (probable fragment)   Candidatus Solibacter usitatus Ellin6076 ABJ88668.1    
 Acid_7773   Candidatus Solibacter usitatus Ellin6076 ABJ88671.1    
 PXC00_02905   Caproicibacterium argilliputei ZCY20-5 WOC32841.1    
 FL966_09660   Caproiciproducens galactitolivorans BS-1 QEY35288.1    
 FL966_09665   Caproiciproducens galactitolivorans BS-1 QEY35289.1    
 FL966_09665   Caproiciproducens galactitolivorans BS-1 QEY35289.1    
 HCR03_15770   Caproiciproducens sp. 7D4C2 QNK40124.1    
 CCAX7_45590   Capsulimonas corticalis AX-7 BDI32508.1    
 PZB72_12705   Catalinimonas niigatensis NBRC 109829 WPP53232.1    
 PZB72_11175   Catalinimonas niigatensis NBRC 109829 WPP52936.1    
 OLW01_17940   Catenovulum sp. TS8 WAJ72160.1    
 Caci_3629   Catenulispora acidiphila DSM 44928 ACU72532.1    
 Caci_3630   Catenulispora acidiphila DSM 44928 ACU72533.1    
 Caci_6877   Catenulispora acidiphila DSM 44928 ACU75715.1    
 Caci_3464   Catenulispora acidiphila DSM 44928 ACU72370.1    
 C1707_08995   Caulobacter flavus RHGG3 AYV46384.1    
 C1707_22005   Caulobacter flavus RHGG3 AYV48719.1    
 C1707_14100   Caulobacter flavus RHGG3 AYV47301.1    
Top


Last update: 2024-04-23 © Copyright 1998-2024
AFMB - CNRS - Université d'Aix-Marseille