Glycoside Hydrolase Family 28

Activities in Familypolygalacturonase (EC 3.2.1.15); α-L-rhamnosidase (EC 3.2.1.40); exo-polygalacturonase (EC 3.2.1.67); exo-polygalacturonosidase (EC 3.2.1.82); rhamnogalacturonase (EC 3.2.1.171); rhamnogalacturonan α-1,2-galacturonohydrolase (EC 3.2.1.173); endo-xylogalacturonan hydrolase (EC 3.2.1.-)
Mechanism Inverting
ClanGH-N
3D Structure Status( β )-helix
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorAsp
External resourcesCAZypedia; HOMSTRAD; PROSITE;
Commercial Enzyme Provider(s)MEGAZYME;
Statistics GenBank accession (7085); Uniprot accession (1123); PDB accession (18); 3D entries (17); cryst (3)
All (5304) Archaea (11) Bacteria (2587) Eukaryota (2700) unclassified (6) Structure (17 - 3 cryst) Characterized (219)
| 1 | ... | 17 | 18 | 19 | 20 | 21 | 22 | 23 | 24 | 25 | 26 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 SHXM_08108   Streptomyces hygroscopicus XM201 AQW54645.1    
 SIRAN9178   Streptomyces iranensis CDR16912.1    
 SIRAN8247   Streptomyces iranensis CDR14163.1    
 SLINC_6630   Streptomyces lincolnensis NRRL 2936 ANS68854.1    
 Orf65   Streptomyces nanchangensis NS3226 ADC45581.1 D6C4C0  
 SNOUR_34710 (PglA) (fragment)   Streptomyces noursei ATCC 11455 ANZ20170.1    
 M271_41580   Streptomyces rapamycinicus NRRL 5491 AGP59693.1    
 M271_46630   Streptomyces rapamycinicus NRRL 5491 AGP60689.1    
 CGL27_07695   Streptomyces sp. 11-1-2 ASQ93053.1    
 CGL27_35295   Streptomyces sp. 11-1-2 ASQ97589.1    
 CGL27_04205   Streptomyces sp. 11-1-2 ASQ92467.1    
 SAMN05444521_5975   Streptomyces sp. 3214.6 SHI23984.1    
 A4E84_31525   Streptomyces sp. S10(2016) AMW13643.1    
 Strvi_4806   Streptomyces violaceusniger Tu 4113 AEM84367.1    
 Strvi_5207   Streptomyces violaceusniger Tu 4113 AEM84741.1    
 Strvi_6173   Streptomyces violaceusniger Tu 4113 AEM85654.1    
 C1A40_02110   Tamlana sp. UJ94 AUS04340.1    
 C1A40_01590 (fragment)   Tamlana sp. UJ94 AUS04247.1    
 C1A40_17040   Tamlana sp. UJ94 AUS07043.1    
 TF3313_0452   Tannerella forsythia 3313 BAR48035.1    
 BFO_0490   Tannerella forsythia 92A2 ATCC 43037 AEW21978.1    
 TFKS16_0449   Tannerella forsythia KS16 BAR50762.1    
 LMI_2226   Tatlockia micdadei ATCC33218 CEG61498.1    
 B6N58_05005   Tatlockia micdadei NZ2015 ARG97076.1    
 B6V88_09690   Tatlockia micdadei NZ2016 ARH00665.1    
 A7K99_19240   Tatumella citrea ATCC 39140 ARU99711.1    
 A7K98_19255   Tatumella citrea DSM 13699 ARU95670.1    
 NCTC11468_03584 (PehA)   Tatumella ptyseos NCTC11468 SQK77210.1    
 TERTU_1491   Teredinibacter turnerae T7901 ACR12997.1 C5BT69  
 Terro_2738   Terriglobus roseus DSM 18391 AFL88974.1    
 Terro_3543   Terriglobus roseus DSM 18391 AFL89757.1    
 Terro_4297   Terriglobus roseus DSM 18391 AFL90494.1    
 Terro_0532   Terriglobus roseus DSM 18391 AFL86873.1    
 SAMN05444167_0101   Terriglobus roseus GAS232 SDE67324.1    
 SAMN05444167_1978   Terriglobus roseus GAS232 SDF29481.1    
 SAMN05444167_1616   Terriglobus roseus GAS232 SDF17549.1    
 SAMN05444167_3791   Terriglobus roseus GAS232 SDF94769.1    
 SAMN05444167_3889   Terriglobus roseus GAS232 SDF98505.1    
 SAMN05444167_1930   Terriglobus roseus GAS232 SDF27760.1    
 AciPR4_0852   Terriglobus saanensis SP1PR4 ADV81685.1 E1N4L0  
 AciPR4_1714   Terriglobus saanensis SP1PR4 ADV82521.1 E1MXZ7  
 AciPR4_2220   Terriglobus saanensis SP1PR4 ADV83022.1 E1N6D8  
 AciPR4_2713   Terriglobus saanensis SP1PR4 ADV83487.1 E1N146  
 AciPR4_2758   Terriglobus saanensis SP1PR4 ADV83531.1 E1N231  
 Thit_1735   Thermoanaerobacter italicus Ab9 ADD02980.1 D3T428  
 Tsac_0164   Thermoanaerobacterium saccharolyticum JW/SL-YS485 AFK85200.1    
 Tsac_0344   Thermoanaerobacterium saccharolyticum JW/SL-YS485 AFK85374.1    
 Tthe_2398   Thermoanaerobacterium thermosaccharolyticum DSM 571 ADL69863.1 D9TSK8  
 Thethe_02448   Thermoanaerobacterium thermosaccharolyticum M0795 AGB20016.1    
 Thert_00932 (PgaA)   Thermoanaerobacterium thermosaccharolyticum TG57 AST57058.1    
 polygalacturonase (PglA) 3.2.1.15 Thermoanaerobacterium thermosulfurigenes EM1 AAB08040.1 Q60045  
 Thexy_2050   Thermoanaerobacterium xylanolyticum LX-11 AEF18063.1    
 THTE_1516   Thermogutta terrifontis R1 ASV74118.1    
 THTE_2121   Thermogutta terrifontis R1 ASV74723.1    
 THTE_0436   Thermogutta terrifontis R1 ASV73038.1    
 exo-polygalacturonase (GalU;PelB;ExoPG;TM0437;TM_0437;Tmari_0434) 3.2.1.67 Thermotoga maritima MSB8 AAD35522.1
AGL49359.1
AHD17805.1
AKE28230.1
NP_228247.1
Q9WYR8 3JUR[A,B,C,D]
 THMB_0443   Thermotoga maritima Tma100 AKE30104.1    
 THMC_0443   Thermotoga maritima Tma200 AKE26366.1    
 Tpet_0483   Thermotoga petrophila RKU-1 ABQ46507.1 A5IJY4  
 T2812B_02500   Thermotoga sp. 2812B AIY86049.1    
 TRQ2_0498   Thermotoga sp. RQ2 ACB08854.1 B1L956  
 TRQ7_02670   Thermotoga sp. RQ7 AJG40369.1    
 NIES37_45950   Tolypothrix tenuis PCC 7101 NIES-37 BAZ00600.1    
 Trebr_2550   Treponema brennaborense DSM 12168 AEE17954.1    
 Spica_0634   Treponema caldarium DSM 7334 AEJ18788.1    
 polygalacturonase (PehA) 3.2.1.15 Treponema pectinovorum ATCC 33768 AAT11785.1 Q6J9G4  
 glycosyl hydrolases family 28, partial (fragment)   uncultured bacterium AMJ38573.1    
 glycosyl hydrolases family 28   uncultured bacterium AMJ38402.1    
 exo-poly-α-D-galacturonosidase, glycoside hydrolase family GH28   uncultured bacterium AOE07586.1    
 pectinase (JKR01;RB1)   uncultured bacterium ACL36472.1
AHG55466.1
B8YJC4  
 Polygalacturonase (EC 3.2.1.15)   uncultured bacterium SIP63183.1    
 BD8803   uncultured bacterium AAW84064.1 Q5ENB5  
 BD8804   uncultured bacterium AAW84066.1 Q5ENB3  
 polygalacturonase (fragment)   uncultured bacterium AFU91391.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91392.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91413.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91414.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91415.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91418.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91426.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91427.1    
 polygalacturonase, partial (fragment)   uncultured bacterium AFU91428.1    
 polygalacturonase (Pg_4)   uncultured bacterium AFU91007.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91389.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91390.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91393.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91394.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91395.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91396.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91397.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91398.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91399.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91400.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91401.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91402.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91403.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91404.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91405.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91406.1    
 polygalacturonase (fragment)   uncultured bacterium AFU91407.1    
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