Glycoside Hydrolase Family 28

Activities in Familypolygalacturonase (EC 3.2.1.15); α-L-rhamnosidase (EC 3.2.1.40); exo-polygalacturonase (EC 3.2.1.67); exo-polygalacturonosidase (EC 3.2.1.82); rhamnogalacturonase (EC 3.2.1.171); rhamnogalacturonan α-1,2-galacturonohydrolase (EC 3.2.1.173); endo-xylogalacturonan hydrolase (EC 3.2.1.-)
Mechanism Inverting
ClanGH-N
3D Structure Status( β )-helix
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorAsp
External resourcesCAZypedia; HOMSTRAD; PROSITE;
Commercial Enzyme Provider(s)MEGAZYME;
Statistics GenBank accession (6609); Uniprot accession (1123); PDB accession (18); 3D entries (17); cryst (3)
All (4868) Archaea (11) Bacteria (2233) Eukaryota (2618) unclassified (6) Structure (17 - 3 cryst) Characterized (213)
| 1 | ... | 14 | 15 | 16 | 17 | 18 | 19 | 20 | 21 | 22 | 23 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 BE73_20830 (fragment)   Xanthomonas oryzae pv. oryzicola CFBP7342 AJQ89212.1    
 ACU14_11525   Xanthomonas oryzae pv. oryzicola L8 AKO12524.1    
 ACU12_11565   Xanthomonas oryzae pv. oryzicola RS105 AKO16268.1    
 FE36_02665 (fragment)   Xanthomonas oryzae pv. oryzicola YM15 AKK62845.1    
 FE36_08500   Xanthomonas oryzae pv. oryzicola YM15 AKK63880.1    
 XPE_09060   Xanthomonas perforans 91-118 AQS76430.1    
 BJD13_13395   Xanthomonas perforans LH3 APO99954.1    
 XppCFBP412P_00080   Xanthomonas phaseoli pv. phaseoli CFBP412 ATS20060.1    
 XppCFBP412P_08895   Xanthomonas phaseoli pv. phaseoli CFBP412 ATS21561.1    
 XppCFBP6164P_15340   Xanthomonas phaseoli pv. phaseoli CFBP6164 ATS26707.1    
 XppCFBP6164P_01165   Xanthomonas phaseoli pv. phaseoli CFBP6164 ATS24367.1    
 XppCFBP6546P_01150   Xanthomonas phaseoli pv. phaseoli CFBP6546R ATS28658.1    
 XppCFBP6546P_08270   Xanthomonas phaseoli pv. phaseoli CFBP6546R ATS29817.1    
 XppCFBP6982P_14855   Xanthomonas phaseoli pv. phaseoli CFBP6982 ATS34970.1    
 XppCFBP6982P_01095   Xanthomonas phaseoli pv. phaseoli CFBP6982 ATS32681.1    
 SB85_16665   Xanthomonas sacchari R1 AJC47129.1    
 ORF (short fragment)   Xanthomonas sp. ACCC 10048 AFO38205.1    
 BN444_00761 (Pgla2)   Xanthomonas translucens pv. translucens DSM 18974 SCB05238.1    
 BN444_02249 (Pgla1)   Xanthomonas translucens pv. translucens DSM 18974 SCB03493.1    
 FD63_07380   Xanthomonas translucens pv. undulosa Xtu 4699 AKK67317.1    
 FD63_03115   Xanthomonas translucens pv. undulosa Xtu 4699 AKK66540.1    
 BJD12_16155   Xanthomonas vesicatoria ATCC 35937 LMG 911 APP76499.1    
 BJD12_02905   Xanthomonas vesicatoria ATCC 35937 LMG 911 APP74380.1    
 BI313_05615   Xanthomonas vesicatoria LM159 APO97221.1    
 BI313_19075   Xanthomonas vesicatoria LM159 APO96398.1    
 Xcel_2532   Xylanimonas cellulosilytica DSM 15894 ACZ31547.1 D1BWK2  
 XFHB_02820   Xylella fastidiosa Hib4 ALR05957.1    
 Xfasm12_1628   Xylella fastidiosa M12 ACA12537.1 B0U3V8  
 XfasM23_1570   Xylella fastidiosa M23 ACB92978.1 B2I701  
 P303_07170   Xylella fastidiosa MUL0034 AIC12727.1    
 XFPR_02855   Xylella fastidiosa Pr8x ALR03736.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. fastidiosa 3SV-G AEX88242.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. fastidiosa Alpha 3 AEX88243.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. fastidiosa CC Cab 1 AEX88244.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. fastidiosa CC PM 1 AEX88264.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. fastidiosa Conn Creek AEX88255.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. fastidiosa EB 92-3 AEX88237.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. fastidiosa F2_3 AEX88245.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. fastidiosa Fetzer AEX88256.1    
 XFLM_01630   Xylella fastidiosa subsp. fastidiosa GB514 ADN62329.1 E1RR66  
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. fastidiosa Georgia Grape AEX88246.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. fastidiosa GIL BEC 625 AEX88253.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. fastidiosa Hopland AEX88262.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. fastidiosa King3 AEX88239.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. fastidiosa King4 AEX88240.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. fastidiosa King5 AEX88241.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. fastidiosa L95-1 AEX88238.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. fastidiosa Napa-Silverado AEX88261.1    
 polygalacturonase, partial (fragment)   Xylella fastidiosa subsp. fastidiosa NS1-CmR ANN44273.1    
 polygalacturonase, partial (fragment)   Xylella fastidiosa subsp. fastidiosa NS1-CmR ANN44274.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. fastidiosa PD 10-1 AEX88252.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. fastidiosa PD 92-8 AEX88263.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. fastidiosa PD 95-1 AEX88251.1    
 polygalacturonase, partial (fragment)   Xylella fastidiosa subsp. fastidiosa pglA-KmR ANN44275.1    
 polygalacturonase, partial (fragment)   Xylella fastidiosa subsp. fastidiosa pglA-KmR ANN44276.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. fastidiosa Preston AEX88257.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. fastidiosa SLO AEX88254.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. fastidiosa Teme 1 AEX88258.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. fastidiosa Teme 2 AEX88259.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. fastidiosa Teme 4 AEX88260.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. fastidiosa TS Mer 1 AEX88247.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. fastidiosa TS Vid 1 AEX88248.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. fastidiosa WM1_1 AEX88249.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. fastidiosa WM1_2 AEX88250.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. multiplex 4rd +1 AEX88228.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. multiplex 4rd +2 AEX88229.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. multiplex Alma 311 AEX88226.1    
 PglA (fragment)   Xylella fastidiosa subsp. multiplex AlmaEm3 AHU87286.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. multiplex ALS6 AEX88222.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. multiplex BB 08-1 AEX88232.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. multiplex BB 08-3 AEX88233.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. multiplex BB I-10 AEX88234.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. multiplex BB I-64 AEX88223.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. multiplex BB I-80 AEX88224.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. multiplex BH Elm AEX88266.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. multiplex Georgia Plum AEX88231.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. multiplex GIL GRA 274 ext AEX88219.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. multiplex L95-2 AEX88220.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. multiplex LLA FAL 718 A AEX88218.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. multiplex Oak 92-10 AEX88236.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. multiplex Oak 92-6 AEX88230.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. multiplex Oak 95-1 AEX88235.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. multiplex SRBB AEX88227.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. multiplex UVA 519-B AEX88221.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. multiplex VAL VAL 072 ext AEX88225.1    
 B9J09_02715   Xylella fastidiosa subsp. pauca De Donno ARO68109.1    
 D934_11515   Xylella fastidiosa subsp. sandyi Ann-1 AIC10587.1    
 polygalacturonase (PglA) (fragment)   Xylella fastidiosa subsp. sandyi MED PRI 047 AEX88265.1    
 PD1485 (PglA)   Xylella fastidiosa Temecula1 AAO29329.1
NP_779680.1
Q87BG8  
 PglA   Xylella fastidiosa XF A-05 AFJ79972.1    
 PglA   Xylella fastidiosa XF A-06 AFJ79975.1    
 PglA   Xylella fastidiosa XF A-07 AFJ79976.1    
 PglA   Xylella fastidiosa XF A-08 AFJ79978.1    
 PglA   Xylella fastidiosa XF B-05 AFJ79973.1    
 PglA   Xylella fastidiosa XF C-05 AFJ79974.1    
 PglA   Xylella fastidiosa XF D-07 AFJ79977.1    
 PglA   Xylella fastidiosa XF Oleander AFJ79979.1    
 AYJ57_18585   Yangia sp. CCB-MM3 ANT62416.1    
 AT01_2308 (fragment)   Yersinia aldovae 670-83 AJJ63999.1    
 ACZ76_10035   Yersinia aleksiciae 159 AKP33857.1    
Top


Last update: 2017-12-01 © Copyright 1998-2017
AFMB - CNRS - Université d'Aix-Marseille