Glycoside Hydrolase Family 28

Activities in FamilyXylogalacturonan hydrolase (EC 3.2.1.-);
Endo-polygalacturonase (EC 3.2.1.15);
Rhamnogalacturonase (EC 3.2.1.171);
Rhamnogalacturonan α-1,2-galacturonohydrolase (EC 3.2.1.173);
Galacturonan α-1,4-galacturonidase (EC 3.2.1.67);
Exo-poly-α-digalacturonosidase (EC 3.2.1.82);
Mechanism Inverting a
ClanGH-N
3D Structure Statusparallel β-helix
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorAsp
External resourcesCAZypedia; HOMSTRAD; PROSITE;
Commercial Enzyme Provider(s)MEGAZYME;
Statistics GenBank accession (18863); Uniprot accession (179); PDB accession (25); 3D entries (20); cryst (3)
| 1 | ... | 15 | 16 | 17 | 18 | 19 | 20 | 21 | 22 | 23 | ... | 101 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 INE92_05048 (Pehx_2)   Bacteroides xylanisolvens CL11T00C03 QUT32982.1    
 INE92_04963   Bacteroides xylanisolvens CL11T00C03 QUT32897.1    
 INE93_04865   Bacteroides xylanisolvens CL11T00C41 QUT27372.1    
 INE93_04259   Bacteroides xylanisolvens CL11T00C41 QUT26779.1    
 INE93_04893   Bacteroides xylanisolvens CL11T00C41 QUT27400.1    
 INE93_04857 (Pehx_1)   Bacteroides xylanisolvens CL11T00C41 QUT27364.1    
 INE93_04486   Bacteroides xylanisolvens CL11T00C41 QUT27003.1    
 INE93_04916 (Pehx_2)   Bacteroides xylanisolvens CL11T00C41 QUT27423.1    
 INE93_00198   Bacteroides xylanisolvens CL11T00C41 QUT22788.1    
 INE93_00208   Bacteroides xylanisolvens CL11T00C41 QUT22798.1    
 INE93_00994   Bacteroides xylanisolvens CL11T00C41 QUT23579.1    
 INE93_04906   Bacteroides xylanisolvens CL11T00C41 QUT27413.1    
 INE93_04859   Bacteroides xylanisolvens CL11T00C41 QUT27366.1    
 INE93_04890   Bacteroides xylanisolvens CL11T00C41 QUT27397.1    
 GFH35_07400   Bacteroides xylanisolvens funn3 QRM98518.1    
 GFH35_07120   Bacteroides xylanisolvens funn3 QRM98466.1    
 GFH35_07390   Bacteroides xylanisolvens funn3 QRM98516.1    
 GFH35_03445   Bacteroides xylanisolvens funn3 QRM97815.1    
 GFH35_06955   Bacteroides xylanisolvens funn3 QRM98436.1    
 GFH35_07235   Bacteroides xylanisolvens funn3 QRM98488.1    
 GFH35_03495   Bacteroides xylanisolvens funn3 QRM97825.1    
 GFH35_07055   Bacteroides xylanisolvens funn3 QRN02094.1    
 GFH35_07365   Bacteroides xylanisolvens funn3 QRN02097.1    
 GFH35_26695   Bacteroides xylanisolvens funn3 QRN01960.1    
 FKZ68_10135   Bacteroides xylanisolvens H207 QDH54562.1    
 FKZ68_13035   Bacteroides xylanisolvens H207 QDH55088.1    
 FKZ68_10035   Bacteroides xylanisolvens H207 QDH54544.1    
 FKZ68_09790   Bacteroides xylanisolvens H207 QDH54501.1    
 FKZ68_07965   Bacteroides xylanisolvens H207 QDH54171.1    
 FKZ68_16055   Bacteroides xylanisolvens H207 QDH55639.1    
 FKZ68_09890   Bacteroides xylanisolvens H207 QDH57575.1    
 FKZ68_09855   Bacteroides xylanisolvens H207 QDH54513.1    
 FKZ68_10100   Bacteroides xylanisolvens H207 QDH57578.1    
 FKZ68_13085   Bacteroides xylanisolvens H207 QDH55097.1    
 FKZ68_10015   Bacteroides xylanisolvens H207 QDH54540.1    
 FKZ68_09865   Bacteroides xylanisolvens H207 QDH54514.1    
 BXY_06410   Bacteroides xylanisolvens XB1A CBK65856.1    
 BXY_32580   Bacteroides xylanisolvens XB1A CBK68264.1    
 BXY_32720 (partial)   Bacteroides xylanisolvens XB1A CBK68277.1    
 BXY_32130   Bacteroides xylanisolvens XB1A CBK68220.1    
 BXY_32150   Bacteroides xylanisolvens XB1A CBK68222.1    
 BXY_32210   Bacteroides xylanisolvens XB1A CBK68228.1    
 BXY_32450   Bacteroides xylanisolvens XB1A CBK68251.1    
 BXY_32940   Bacteroides xylanisolvens XB1A CBK68298.1    
 BXY_41460   Bacteroides xylanisolvens XB1A CBK69057.1    
 C4H11_12710   Bacteroides zoogleoformans ATCC 33285 AVM53658.1    
 IX83_05860   Basilea psittacipulmonis DSM 24701 AIL32907.1    
 Belba_2495   Belliella baltica DSM 15883 AFL85050.1    
 BA20089_05160   Bifidobacterium asteroides DSM 20089 ATO41582.1    
 BA20089_06125   Bifidobacterium asteroides DSM 20089 ATO41749.1    
 GYM67_07400   Bifidobacterium asteroides ESL0447 QYN60898.1    
 BAST_1173   Bifidobacterium asteroides PRL2011 AFU71746.1    
 BAST_1365   Bifidobacterium asteroides PRL2011 AFU71934.1    
 BE0216_00030   Bifidobacterium eulemuris DSM 100216 QOL31033.1    
 BE0216_00010 (fragment)   Bifidobacterium eulemuris DSM 100216 QOL31030.1    
 BE0216_11810   Bifidobacterium eulemuris DSM 100216 QOL33043.1    
 BE0216_11830   Bifidobacterium eulemuris DSM 100216 QOL33047.1    
 BL8807_11500   Bifidobacterium lemurum DSM 28807 QOL34313.1    
 BL8807_11480   Bifidobacterium lemurum DSM 28807 QOL34309.1    
 BSD967_00720   Bifidobacterium saguini DSMZ 23967 QTB91007.1    
 BBSC_0930   Bifidobacterium scardovii JCM 12489 = DSM 13734 BAQ31010.1    
 BBSC_0945 (fragment)   Bifidobacterium scardovii JCM 12489 = DSM 13734 BAQ31025.1    
 OZX64_01965   Bifidobacterium sp. ESL0704 WEV53282.1    
 OZX67_07915   Bifidobacterium sp. ESL0728 WEV58710.1    
 B5J99_17895   Blastomonas fulva T2 ASR53096.1    
 BSY18_1703   Blastomonas sp. RAC04 AOG01170.1    
 INP51_04140   Blautia liquoris LZLJ-3 QOV20147.1    
 INP51_04085   Blautia liquoris LZLJ-3 QOV20136.1    
 B0B51_09105   blood disease bacterium A2-HR MARDI AQW30126.1    
 B0B51_16970   blood disease bacterium A2-HR MARDI AQW31670.1    
 BDB_mp40112 (Pgla2)   blood disease bacterium R229 CCA82827.1    
 BDB_mp80066 (PehC)   blood disease bacterium R229 CCA83875.1    
 BDB_110041   blood disease bacterium R229 CCA80612.1    
 KIM372_04960 (fragment)   Bombiscardovia nodaiensis Kim37-2 BDR52589.1    
 KIM372_05040   Bombiscardovia nodaiensis Kim37-2 BDR52597.1    
 KIM372_05000   Bombiscardovia nodaiensis Kim37-2 BDR52593.1    
 Spa11_35580 (PehA)   Botrimarina mediterranea Spa11 QDV75342.1    
 Spa11_20970 (PehX)   Botrimarina mediterranea Spa11 QDV73898.1    
 Spa11_01600 (Pgl_2)   Botrimarina mediterranea Spa11 QDV71991.1    
 Spa11_22590 (Pgl_3)   Botrimarina mediterranea Spa11 QDV74060.1    
 Bfae_29200   Brachybacterium faecium DSM 4810 ACU86681.1    
 CFK41_01740   Brachybacterium ginsengisoli DCY80 ATG56427.1    
 NLU66_05005   Brachybacterium rhamnosum NBEC-018 UVY84963.1    
 BaraCB756_10495   Bradyrhizobium arachidis CB756 UFW51371.1    
 WN72_10445   Bradyrhizobium arachidis CCBAU 051107 QOZ66704.1    
 KUL72_30050   Bradyrhizobium arachidis Hy4 UVO35632.1    
 KUF59_07965   Bradyrhizobium arachidis SM32 UVO30587.1    
 QA635_32440   Bradyrhizobium australafricanum 5G1B WFU31236.1    
 J4G48_0003815 (fragment)   Bradyrhizobium barranii subsp. apii 38S5 UPT97306.1    
 J4G48_0047315   Bradyrhizobium barranii subsp. apii 38S5 UPT96522.1    
 J4G43_044100   Bradyrhizobium barranii subsp. barranii 144S4 UEM11433.1    
 QA636_34030   Bradyrhizobium brasilense CB627 WFU62468.1    
 LPJ38_36055   Bradyrhizobium daqingense CCBAU 15774 UFS88949.1    
 Bdiaspc4_10105   Bradyrhizobium diazoefficiens 110spc4 QBP20831.1    
 HUW42_36695   Bradyrhizobium diazoefficiens 113-2 QLD46171.1    
 HAU57_38165   Bradyrhizobium diazoefficiens 172S4 QIO96965.1
QIO96965.2
   
 BdzoCB1809_36915   Bradyrhizobium diazoefficiens CB1809 UFW57024.1    
 RZR06_35970   Bradyrhizobium diazoefficiens CNPSo 10 WRI97400.1    
 T7685_35960   Bradyrhizobium diazoefficiens CNPSo 104 WRJ05660.1    
 T8J92_35950   Bradyrhizobium diazoefficiens CNPSo 105 WRJ13913.1    
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