Glycoside Hydrolase Family 27

Activities in Familyα-galactosidase (EC 3.2.1.22); α-N-acetylgalactosaminidase (EC 3.2.1.49); isomalto-dextranase (EC 3.2.1.94); β-L-arabinopyranosidase (EC 3.2.1.88); galactan:galactan galactosyltransferase (EC 2.4.1.-)
Mechanism Retaining
ClanGH-D
3D Structure Status( β / α ) 8
Catalytic Nucleophile/BaseAsp
Catalytic Proton DonorAsp
NoteMechanistic commonality with family GH36 demonstrated by Comfort et al. (2007) Biochemistry 46:3319-3330 (PMID: 17323919).
External resourcesCAZypedia; PRINTS; PROSITE;
Commercial Enzyme Provider(s)MEGAZYME; NZYTech; PROZOMIX;
Statistics GenBank accession (1384); Uniprot accession (327); PDB accession (46); 3D entries (13); cryst (0)
All (1128) Archaea (1) Bacteria (797) Eukaryota (329) unclassified (1) Structure (13) Characterized (66)
| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 AR543_15810   Paenibacillus bovis BD3526 ANF97321.1    
 B9T62_17560   Paenibacillus donghaensis KCTC 13049 ASA22436.1    
 VK70_17600   Paenibacillus durus ATCC 35681 AKG36153.1    
 PDUR_22045   Paenibacillus durus DSM 1735 AIQ14286.1    
 PGRAT_08050   Paenibacillus graminis DSM 15220 AIQ67596.1    
 PGRAT_23050   Paenibacillus graminis DSM 15220 AIQ70207.1    
 BBD41_28300   Paenibacillus ihbetae IHBB 9852 ANY76162.1    
 B4V02_13565   Paenibacillus kribbensis AM49 ASR47628.1    
 PM3016_5729   Paenibacillus mucilaginosus 3016 AFC32411.1    
 B2K_29170   Paenibacillus mucilaginosus K02 AFH64722.1    
 KNP414_06099   Paenibacillus mucilaginosus KNP414 AEI44623.1    
 PODO_07665   Paenibacillus odorifer DSM 15391 AIQ73136.1    
 ABE82_11720   Paenibacillus peoriae HS311 ALA42156.1    
 VK72_11625   Paenibacillus polymyxa ATCC 15970 APQ59345.1    
 LK13_23890   Paenibacillus polymyxa CF05 AIY11416.1    
 X809_11935   Paenibacillus polymyxa CR1 AHC19906.1    
 PPE_02216   Paenibacillus polymyxa E681 ADM70049.1 E0RJT0  
 AOU00_24210   Paenibacillus polymyxa J AOK92664.1    
 PPM_2208 (M1_2499)   Paenibacillus polymyxa M1 CCC85145.1    
 RE92_00805   Paenibacillus polymyxa Sb3-1 AJE49682.1    
 PPSC2_c2450   Paenibacillus polymyxa SC2 ADO56422.1 E3EJD5  
 PPSQR21_022940   Paenibacillus polymyxa SQR-21 SQR21 AHM65939.1    
 PRIO_5005   Paenibacillus riograndensis SBR5 CQR57407.1    
 PRIO_2637   Paenibacillus riograndensis SBR5 CQR55041.1    
 PRIO_1726   Paenibacillus riograndensis SBR5 CQR54109.1    
 PSAB_19400   Paenibacillus sabinae T27 AHV98773.1    
 BBD42_23010   Paenibacillus sp. BIHB4019 ANY69031.1    
 BBD42_17810   Paenibacillus sp. BIHB4019 ANY70802.1    
 H70357_33375   Paenibacillus sp. FSL H7-0357 AIQ21024.1    
 H70737_07485   Paenibacillus sp. FSL H7-0737 AIQ22709.1    
 P40081_13505   Paenibacillus sp. FSL P4-0081 AIQ29066.1    
 P40081_08255   Paenibacillus sp. FSL P4-0081 AIQ28174.1    
 R50345_07770   Paenibacillus sp. FSL R5-0345 AIQ34519.1    
 R50912_07385   Paenibacillus sp. FSL R5-0912 AIQ39871.1    
 R50912_13110   Paenibacillus sp. FSL R5-0912 AIQ40862.1    
 R70723_12535   Paenibacillus sp. FSL R7-0273 AIQ46608.1    
 R70723_08015   Paenibacillus sp. FSL R7-0273 AIQ45829.1    
 R70331_08060   Paenibacillus sp. FSL R7-0331 AIQ51467.1    
 R70331_11980   Paenibacillus sp. FSL R7-0331 AIQ52152.1    
 ASL14_24610   Paenibacillus sp. IHB B 3084 ALP38859.1    
 Pjdr2_3202   Paenibacillus sp. JDR-2 ACT01843.1 C6D1H9  
 Pjdr2_3562   Paenibacillus sp. JDR-2 ACT02195.1 C6D3K2  
 Pjdr2_4264   Paenibacillus sp. JDR-2 ACT02888.1 C6D785  
 Pjdr2_4104   Paenibacillus sp. JDR-2 ACT02733.1 C6D6G0  
 LPB68_18725   Paenibacillus sp. LPB0068 AOZ94018.1    
 LPB68_18805   Paenibacillus sp. LPB0068 AOZ94796.1    
 HPL003_22715   Paenibacillus terrae HPL-003 AET61267.1    
 BS614_18535   Paenibacillus xylanexedens PAMC 22703 APO45824.1    
 BS614_07785   Paenibacillus xylanexedens PAMC 22703 APO43919.1    
 Palpr_1630   Paludibacter propionicigenes WB4 ADQ79771.1 E4T4X7  
 Palpr_1653   Paludibacter propionicigenes WB4 ADQ79794.1 E4T500  
 Palpr_1815   Paludibacter propionicigenes WB4 ADQ79954.1 E4T5G0  
 Palpr_1626   Paludibacter propionicigenes WB4 ADQ79767.1 E4T4X3  
 CI960_12085   Parabacteroides sp. CT06 AST54032.1    
 K788_0002948 (fragment)   Paraburkholderia caribensis MBA4 ALL66697.1    
 AY601_0610   Pedobacter cryoconitis PAMC 27485 AMP97560.1    
 Phep_0715   Pedobacter heparinus DSM 2366 ACU02937.1 C6Y1G1  
 Phep_1839   Pedobacter heparinus DSM 2366 ACU04047.1 C6XVI1  
 Phep_2885   Pedobacter heparinus DSM 2366 ACU05083.1 C6Y1U1  
 Phep_2887   Pedobacter heparinus DSM 2366 ACU05085.1 C6Y1U3  
 AQ505_17305   Pedobacter sp. PACM 27299 ALL08859.1    
 AQ505_11245   Pedobacter sp. PACM 27299 ALL06016.1    
 BFS30_21025   Pedobacter steynii DX4 AOM79427.1    
 PSMK_08660   Phycisphaera mikurensis NBRC 102666 BAM03025.1    
 L21SP3_02304 (AgaA)   Phycisphaerae bacterium L21-RPul-D3 AQQ10471.1    
 STSP2_00372 (Agaa_1)   Phycisphaerae bacterium ST-NAGAB-D1 AQT67229.1    
 STSP2_02148 (Agaa_2)   Phycisphaerae bacterium ST-NAGAB-D1 AQT68970.1    
 STSP2_02617 (Agaa_3)   Phycisphaerae bacterium ST-NAGAB-D1 AQT69427.1    
 STSP1_01036 (AgaA)   Phycisphaerae bacterium ST-PulAB-D4 ARN56648.1    
 BWO91_09610   Plantibacter flavus 251 AQX82132.1    
 LPB03_10260   Polaribacter vadi LPB0003 AOW17813.1    
 α-galactosidase (AgaA)   Pontibacter sp. HJ8 AME17654.1    
 PGF_00020000   Porphyromonas gingivalis 381 ALJ26412.1    
 PGA7_00000800   Porphyromonas gingivalis A7436 AKV63328.1    
 PGS_00019270   Porphyromonas gingivalis A7A1-28 ALO30584.1    
 PGJ_00000730   Porphyromonas gingivalis AJW4 ALA92716.1    
 PGN_2032   Porphyromonas gingivalis ATCC 33277 BAG34550.1 B2RMF5  
 EG14_01910   Porphyromonas gingivalis HG66 AIJ34887.1    
 PGTDC60_0363   Porphyromonas gingivalis TDC60 BAK24532.1    
 PG0085   Porphyromonas gingivalis W83 AAQ65333.1
NP_904434.1
Q7MXS5  
 Prede_1403   Prevotella dentalis DSM 3688 AGB28718.1    
 HMPREF9137_0438   Prevotella denticola F0289 AEA20682.1    
 ADJ77_07260   Prevotella fusca JCM 17724 AKU69569.1    
 HMPREF0659_A6322   Prevotella melaninogenica ATCC 25845 ADK96067.1 D9RSZ1  
 ADK96222.1   Prevotella melaninogenica ATCC 25845 ADK96222.1    
 CEP85_06955   Prevotella melaninogenica FDAARGOS_306 ASE17827.1    
 CEP85_06700   Prevotella melaninogenica FDAARGOS_306 ASE17782.1    
 PMEL1_01319   Prevotella melaninogenica GAI 07411 BBA29384.1    
 PMEL1_01281   Prevotella melaninogenica GAI 07411 BBA29349.1    
 PRU_2377   Prevotella ruminicola 23 ADE82935.1 D5EVX6  
 HMPREF9420_1550   Prevotella salivae DSM 15606 EFV04299.1    
 AXF22_02475   Prevotella scopos JCM 17725 ANR72383.1    
 AXF22_02200   Prevotella scopos JCM 17725 ANR72335.1    
 HMPREF0669_01846   Prevotella sp. oral taxon 299 str. F0039 EFC70149.2    
 Achl_0056   Pseudarthrobacter chlorophenolicus A6 ACL38059.1 B8H885  
 SAMN04489743_0354   Pseudarthrobacter equi IMMIB L-1606 SDS56950.1    
 Pedsa_2573   Pseudopedobacter saltans DSM 12145 ADY53117.1    
 Pedsa_3616   Pseudopedobacter saltans DSM 12145 ADY54145.1    
 BTZ20_3734   Rhodococcus sp. MTM3W5.2 AQA24889.1    
 Rmar_2597   Rhodothermus marinus DSM 4252 ACY49470.1 D0MFY1  
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