Glycoside Hydrolase Family 16 / Subf 17

Activities in Sub Familyκ-carrageenase (EC 3.2.1.83);
Mechanism Retaining e
ClanGH-B
3D Structure Statusβ-jelly roll
Catalytic Nucleophile/BaseGlu (experimental)
Catalytic Proton DonorGlu (experimental)
NoteMany members have been assigned to subfamilies as described by Viborg et al. (2019) J Biol Chem. 2019 Sep 9 (PMID: 31501245).
External resourcesCAZypedia; HOMSTRAD; PRINTS; PROSITE; XTH-World;
Commercial Enzyme Provider(s)MEGAZYME; NZYTech; PROZOMIX;
Statistics GenBank accession (97); Uniprot accession (11); PDB accession (3); 3D entries (2); cryst (0)
Bacteria
Protein Name EC# OrganismGenBankUniprot
PDB/3D Carbohydrate Ligands Resolution (Å)
Subf
 κ-carrageenase (CgkA) 3.2.1.83 Pseudoalteromonas carrageenovora ATCC 43555 CAA50624.1
AAW20552.1
P43478
1DYP[A] 1.54
5OCQ[A,B] unknown-(1-3)-β-D-Galp4SO3-(1-1)-<non_carb>
1.70
17
 κ-carrageenase (CgkA;zobellia_236) 3.2.1.83 Zobellia galactanivorans DsijT CAZ94309.1
AAC27890.1
AAW20553.1
CAH61386.1
G0L921
O84907
5OCR[A,B,C,D] 1.66
17
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