Glycoside Hydrolase Family 16 / Subf 17

Activities in Sub Familyκ-carrageenase (EC 3.2.1.83);
Mechanism Retaining e
ClanGH-B
3D Structure Statusβ-jelly roll
Catalytic Nucleophile/BaseGlu (experimental)
Catalytic Proton DonorGlu (experimental)
NoteMany members have been assigned to subfamilies as described by Viborg et al. (2019) J Biol Chem. 2019 Sep 9 (PMID: 31501245).
External resourcesCAZypedia; HOMSTRAD; PRINTS; PROSITE; XTH-World;
Commercial Enzyme Provider(s)MEGAZYME; NZYTech; PROZOMIX;
Statistics GenBank accession (98); Uniprot accession (13); PDB accession (3); 3D entries (2); cryst (0)
Bacteria
Protein Name EC#ReferenceOrganismGenBank UniprotPDB/3DSubf
 κ-carrageenase (Ce384; CeCgkA; CWS31_006650) 3.2.1.83 pubmed
Colwellia echini A3 TYK66269.1
WP_148747726.1
    17
 κ-carrageenase (Ph1664) 3.2.1.83 pubmed
Paraglaciecola hydrolytica S66 QEP52097.1     17
 κ-carrageenase (CgkA; CgK) 3.2.1.83 pubmed
Pedobacter sp. NJ-02 ASA33936.1 A0A7R6BZ37   17
 κ-carrageenase (CgkA) 3.2.1.83 pubmed
Pseudoalteromonas carrageenovora ATCC 43555 CAA50624.1
AAW20552.1
P43478 1DYP[A]
5OCQ[A,B]
17
 endo-k-carrageenase (GH16A; EU509_08815) 3.2.1.83 pubmed
Pseudoalteromonas fuliginea PS47 KAA1157103.1 A0A833AIZ1   17
 endo-k-carrageenase (k-carrageenan specific) (CgkA; GH16C; EU509_08960) 3.2.1.83 pubmed
Pseudoalteromonas fuliginea PS47 KAA1157131.1 A0A833EK53   17
 κ-carrageenase 3.2.1.83 doi
Pseudoalteromonas sp. LL1 / Pseudoalteromonas porphyrae LL1 ADD92366.1
ADA83458.1
D2XZ59
D5K195
  17
 κ-carrageenase (Cgk-K142a) 3.2.1.83 pubmed
Pseudoalteromonas tetraodonis JAM-K142 BAJ61957.1 E7FKF4   17
 κ-carrageenase (RsCgk; RSSM_05530) 3.2.1.83 pubmed
Rhodopirellula sallentina SM41 EMI53032.1 M5TV11   17
 κ-carrageenase (CgkS) 3.2.1.83 doi
Shewanella sp. Kz7 AHN05534.1 W8V7X4   17
 κ-carrageenase (Cgk16A) 3.2.1.83 pubmed
Wenyingzhuangia sp. OF219 AST13124.1 A0A223FUT7   17
 κ-carrageenase (CgkA;zobellia_236) 3.2.1.83 pubmed
Zobellia galactanivorans DsijT CAZ94309.1
AAC27890.1
AAW20553.1
CAH61386.1
G0L921
O84907
5OCR[A,B,C,D] 17
 κ-carrageenase (CgkZ) 3.2.1.83 pubmed
Zobellia sp. M-2 / CCTCC M2013256 AGS43006.1 S5U3X4   17
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