| Activities in Sub Family | α-carrageenase (EC 3.2.1.-); β-carrageenase (EC 3.2.1.-); κ-carrageenase (EC 3.2.1.83); |
|---|---|
| Mechanism | Retaining e |
| Clan | GH-B |
| 3D Structure Status | β-jelly roll |
| Catalytic Nucleophile/Base | Glu (experimental) |
| Catalytic Proton Donor | Glu (experimental) |
| Note | Many members have been assigned to subfamilies as described by Viborg et al. (2019) J Biol Chem. 2019 Sep 9 (PMID: 31501245). |
| External resources | CAZypedia; HOMSTRAD; PRINTS; PROSITE; XTH-World; |
| Commercial Enzyme Provider(s) | MEGAZYME; NZYTech; PROZOMIX; |
| Statistics | GenBank accession (105); Uniprot accession (4); |
| Bacteria | ||||||||
| Protein Name | EC# | Reference | Organism | GenBank | Uniprot | PDB/3D | Subf | |
| b-/k-carrgeenase / furcellaranase (Ce385; CWS31_006655) | 3.2.1.- | pubmed |
Colwellia echini A3 | TYK66270.1 | 13 | |||
| b-/k-carrgeenase / furcellaranase (Ce387; CWS31_006665) | 3.2.1.- | pubmed |
Colwellia echini A3 | TYK66272.1 | 13 | |||
| b-/k-carrageenase / furcellaranase 16A (OUC-FaGH16A; LXH21_14795) | 3.2.1.83 3.2.1.- |
pubmed pubmed |
Flavobacterium algicola MBE-1 | MCG9793741.1 | 13 | |||
| b-/k-carrageenase / furcellaranase 16B (OUC-FaGH16B; LXH21_14810) | 3.2.1.83 3.2.1.- |
pubmed pubmed |
Flavobacterium algicola MBE-1 | MCG9793744.1 | 13 | |||
| κ-carrageenase (Ph1664) | 3.2.1.83 | pubmed |
Paraglaciecola hydrolytica S66 | WP_106404066.1 | 13 | |||
| β-carrageenase (Ph1656) | 3.2.1.- | pubmed |
Paraglaciecola hydrolytica S66 | WP_082768866.1 QEP52094.1 |
A0A5C2IE10 | 13 | ||
| β-carrageenase (Ph1663) | 3.2.1.- | pubmed |
Paraglaciecola hydrolytica S66 | WP_082768819.1 QEP52096.1 |
13 | |||
| exo-β-carrageenase (Ph1675) | 3.2.1.- | pubmed |
Paraglaciecola hydrolytica S66 | QEP52098.1 WP_082768820.1 |
13 | |||
| endo-carrageenase (a- and β-carrageenan specific) (GH16B; EU509_08870) | 3.2.1.- | pubmed |
Pseudoalteromonas fuliginea PS47 | KAA1157114.1 | A0A833AHS5 | 13 | ||
| κ-carrageenase (Car1383) | 3.2.1.83 | pubmed |
uncultured bacterium | UOA04105.1 | 13 | |||
| b-/k-carrageenase (Cgbk16A; Cgbk16A_Wf; AXE80_10150) | 3.2.1.83 3.2.1.- |
pubmed pubmed |
Wenyingzhuangia fucanilytica CZ1127 | WP_083194645.1 ANW96615.1 |
A0A1B1Y771 | 13 | ||
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