| Activities in Sub Family | [retaining] α-amylase (EC 3.2.1.1); |
|---|---|
| Mechanism | Retaining a |
| Clan | GH-H |
| 3D Structure Status | ( β / α ) 8 barrel |
| Catalytic Nucleophile/Base | Asp (experimental) |
| Catalytic Proton Donor | Glu (experimental) |
| Note | New: many members have been assigned to subfamilies as described by Stam et al. (2006) Protein Eng Des Sel. 19, 555-562 (PMID: 17085431) |
| External resources | CAZypedia; EBI Protein of the Month; HOMSTRAD; PDB Molecule of the Month; PRINTS; |
| Commercial Enzyme Provider(s) | MEGAZYME; PROZOMIX; |
| Statistics | GenBank accession (273); Uniprot accession (16); PDB accession (4); 3D entries (2); cryst (0) |
| Archaea | ||||||||
| Protein Name | EC# | Reference | Organism | GenBank | Uniprot | PDB/3D | Subf | |
| α-amylase (AmyA; PFA; PF0477) | 3.2.1.1 | pubmed |
Pyrococcus furiosus DSM 3638 | NP_578206.1 AAB67705.1 AAC45663.1 AAL80601.1 |
O08452 Q8U3I9 |
7 | ||
| α-amylase (AmyA) | 3.2.1.1 | Pyrococcus woesei | AAD54338.1 AAF44693.1 ACH26211.1 |
Q7LYT7 Q9P9L0 |
1MWO[A] 1MXD[A] 1MXG[A] |
7 | ||
| α-amylase (Amy) | 3.2.1.1 | Thermococcus hydrothermalis AL662 | AAC97877.1 AAC97878.1 ACH26213.1 |
O93647 O93648 |
7 | |||
| α-amylase (ApkA;TK1884) | 3.2.1.1 | doi |
Thermococcus kodakarensis KOD1 | BAA21130.1 ACH26210.1 BAD86073.1 CAT70635.1 |
O33476 Q5JER7 |
7 | ||
| α-amylase (TO_Amyl;TON_1660) | 3.2.1.1 | pubmed |
Thermococcus onnurineus NA1 | ABA26948.1 ACJ17150.1 |
B6YUG5 Q2QC88 |
7 | ||
| α-amylase (BD5031) | 3.2.1.1 | Thermococcus sp. AEPII 1a | AAM48113.1 ACH26099.1 |
Q8NKR4 | 7 | |||
| α-amylase (BD5064) | 3.2.1.1 | Thermococcus sp. GU5L5 | AAM48112.1 ACH26098.1 |
Q8NKR5 | 7 | |||
| α-amylase (THJA) | 3.2.1.1 | Thermococcus sp. HJ21 | ABU98335.1 | B4X9V8 | 7 | |||
| α-amylase | 3.2.1.1 | Thermococcus sp. Rt3 | AAB87860.1 ACH26212.1 |
O50200 | 7 | |||
| α-amylase (Amy) | 3.2.1.1 | Thermococcus thioreducens | AAT11125.1 | Q66SB4 | 7 | |||
| Bacteria | ||||||||
| Protein Name | EC# | Reference | Organism | GenBank | Uniprot | PDB/3D | Subf | |
| α-amylase (AmyZ2;ZPR_2825) | 3.2.1.1 | doi |
Zunongwangia profunda SM-A87 | ADF53145.1 | 7 | |||
| unclassified | ||||||||
| Protein Name | EC# | Reference | Organism | GenBank | Uniprot | PDB/3D | Subf | |
| α-amylase (BD5063) | 3.2.1.1 | uncultured organism | AAM48114.1 ACH26097.1 |
Q8JZK3 | 7 | |||
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