Glycoside Hydrolase Family 13 / Subf 7

Activities in Sub Family[retaining] α-amylase (EC 3.2.1.1);
Mechanism Retaining a
ClanGH-H
3D Structure Status( β / α ) 8 barrel
Catalytic Nucleophile/BaseAsp (experimental)
Catalytic Proton DonorGlu (experimental)
NoteNew: many members have been assigned to subfamilies as described by Stam et al. (2006) Protein Eng Des Sel. 19, 555-562 (PMID: 17085431)
External resourcesCAZypedia; EBI Protein of the Month; HOMSTRAD; PDB Molecule of the Month; PRINTS;
Commercial Enzyme Provider(s)MEGAZYME; PROZOMIX;
Statistics GenBank accession (286); Uniprot accession (19); PDB accession (4); 3D entries (2); cryst (0)
Archaea
Protein Name EC#ReferenceOrganismGenBank UniprotPDB/3DSubf
 α-amylase (AmyA; PFA; PfAmy; PF0477) 3.2.1.1 pubmed
Pyrococcus furiosus DSM 3638 AAL80601.1
AAB67705.1
AAC45663.1
NP_578206.1
O08452
Q8U3I9
  7
 α-amylase (AmyA) 3.2.1.1   Pyrococcus woesei AAD54338.1
AAF44693.1
ACH26211.1
Q7LYT7
Q9P9L0
1MWO[A]
1MXD[A]
1MXG[A]
7
 α-amylase (TeAmy; TEU_02420) 3.2.1.1 pubmed
Thermococcus eurythermalis A501 AIU69287.1
WP_050002265.1
A0A097QS36   7
 α-amylase (Amy) 3.2.1.1   Thermococcus hydrothermalis AL662 AAC97877.1
AAC97878.1
ACH26213.1
O93647
O93648
  7
 α-amylase (ApkA;TK1884) 3.2.1.1 doi
Thermococcus kodakarensis KOD1 BAA21130.1
ACH26210.1
BAD86073.1
CAT70635.1
O33476
Q5JER7
  7
 α-amylase (TO_Amyl;TON_1660) 3.2.1.1 pubmed
Thermococcus onnurineus NA1 ABA26948.1
ACJ17150.1
B6YUG5
Q2QC88
  7
 α-amylase (BD5031) 3.2.1.1   Thermococcus sp. AEPII 1a AAM48113.1
ACH26099.1
Q8NKR4   7
 α-amylase (BD5064) 3.2.1.1   Thermococcus sp. GU5L5 AAM48112.1
ACH26098.1
Q8NKR5   7
 α-amylase (THJA) 3.2.1.1   Thermococcus sp. HJ21 ABU98335.1 B4X9V8   7
 α-amylase 3.2.1.1   Thermococcus sp. Rt3 AAB87860.1
ACH26212.1
O50200   7
 α-amylase (Amy) 3.2.1.1   Thermococcus thioreducens AAT11125.1 Q66SB4   7
Bacteria
Protein Name EC#ReferenceOrganismGenBank UniprotPDB/3DSubf
 α-amylase (FSA) 3.2.1.1 pubmed
Flavobacteriaceae bacterium BPA / 5DNS001 AGD88873.1 L7Y1I6   7
 α-amylase (AmyZ2;ZPR_2825) 3.2.1.1 doi
Zunongwangia profunda SM-A87 ADF53145.1 D5BG32   7
unclassified
Protein Name EC#ReferenceOrganismGenBank UniprotPDB/3DSubf
 α-amylase (BD5063) 3.2.1.1   uncultured organism AAM48114.1
ACH26097.1
Q8JZK3   7
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