Glycoside Hydrolase Family 13 / Subf 7

Activities in Familyα-amylase (EC 3.2.1.1); pullulanase (EC 3.2.1.41); cyclomaltodextrin glucanotransferase (EC 2.4.1.19); cyclomaltodextrinase (EC 3.2.1.54); trehalose-6-phosphate hydrolase (EC 3.2.1.93); oligo-α-glucosidase (EC 3.2.1.10); maltogenic amylase (EC 3.2.1.133); neopullulanase (EC 3.2.1.135); α-glucosidase (EC 3.2.1.20); maltotetraose-forming α-amylase (EC 3.2.1.60); isoamylase (EC 3.2.1.68); glucodextranase (EC 3.2.1.70); maltohexaose-forming α-amylase (EC 3.2.1.98); maltotriose-forming α-amylase (EC 3.2.1.116); branching enzyme (EC 2.4.1.18); trehalose synthase (EC 5.4.99.16); 4-α-glucanotransferase (EC 2.4.1.25); maltopentaose-forming α-amylase (EC 3.2.1.-) ; amylosucrase (EC 2.4.1.4) ; sucrose phosphorylase (EC 2.4.1.7); malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141); isomaltulose synthase (EC 5.4.99.11); malto-oligosyltrehalose synthase (EC 5.4.99.15); amylo-α-1,6-glucosidase (EC 3.2.1.33); α-1,4-glucan: phosphate α-maltosyltransferase (EC 2.4.99.16); 6'-P-sucrose phosphorylase (EC 2.4.1.-); amino acid transporter
Activities in Sub Family
Mechanism Retaining
ClanGH-H
3D Structure Status( β / α ) 8
Catalytic Nucleophile/BaseAsp (experimental)
Catalytic Proton DonorGlu (experimental)
NoteNew: many members have been assigned to subfamilies as described by Stam et al. (2006) Protein Eng Des Sel. 19, 555-562 (PMID: 17085431)
External resourcesCAZypedia; EBI Protein of the Month; HOMSTRAD; PDB Molecule of the Month; PRINTS;
Commercial Enzyme Provider(s)MEGAZYME; PROZOMIX;
Statistics GenBank accession (142); Uniprot accession (28); PDB accession (4); 3D entries (2); cryst (0)
Archaea
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 PAP_00275   Palaeococcus pacificus DY20341 AIF68502.1     7
 PFC_01500   Pyrococcus furiosus COM1 AFN03271.1     7
 α-amylase (AmyA;PF0477) 3.2.1.1 Pyrococcus furiosus DSM 3638 AAL80601.1
AAB67705.1
AAC45663.1
NP_578206.1
O08452
Q8U3I9
  7
 α-amylase (thermostable)   Pyrococcus woesei     3QGV[A] 7
 α-amylase (AmyA) 3.2.1.1 Pyrococcus woesei AAD54338.1
AAF44693.1
ACH26211.1
Q7LYT7
Q9P9L0
1MWO[A]
1MXD[A]
1MXG[A]
7
 PYCH_18550   Pyrococcus yayanosii CH1 AEH25510.1     7
 A3L01_09160   Thermococcus barossii SHCK-94 ASJ05521.1     7
 A3L02_07325 (fragment)   Thermococcus celer Vu 13 ASI99378.1     7
 CL1_1040   Thermococcus cleftensis AFL95243.1     7
 TEU_02420   Thermococcus eurythermalis A501 AIU69287.1     7
 TGAM_0222 (AmyA-1)   Thermococcus gammatolerans EJ3 ACS32724.1 C5A3B2   7
 X802_03495 (fragment)   Thermococcus guaymasensis DSM 11113 AJC72690.1     7
 α-amylase (Amy) 3.2.1.1 Thermococcus hydrothermalis AL662 AAC97877.1
AAC97878.1
ACH26213.1
O93647
O93648
  7
 α-amylase (ApkA;TK1884) 3.2.1.1 Thermococcus kodakarensis KOD1 BAA21130.1
ACH26210.1
BAD86073.1
CAT70635.1
O33476
Q5JER7
  7
 α-amylase (TO_Amyl;TON_1660) 3.2.1.1 Thermococcus onnurineus NA1 ABA26948.1
ACJ17150.1
B6YUG5   7
 A0127_05805   Thermococcus peptonophilus OG-1 AMQ18717.1     7
 A7C91_03825 (fragment)   Thermococcus piezophilus CDGS ANF22396.1     7
 A3L09_01615   Thermococcus profundus DT 5432 ASJ02053.1     7
 A3L11_02635   Thermococcus siculi RG-20 ASJ08179.1     7
 ADU37_CDS21030   Thermococcus sp. 2319x1 ALV63800.1     7
 GQS_07090   Thermococcus sp. 4557 AEK73316.1     7
 α-amylase (BD5031) 3.2.1.1 Thermococcus sp. AEPII 1a AAM48113.1
ACH26099.1
Q8NKR4   7
 TAM4_1203   Thermococcus sp. AM4 EEB73455.2     7
 α-amylase (BD5064) 3.2.1.1 Thermococcus sp. GU5L5 AAM48112.1
ACH26098.1
Q8NKR5   7
 α-amylase (THJA) 3.2.1.1 Thermococcus sp. HJ21 ABU98335.1 B4X9V8   7
 A3L12_00010   Thermococcus sp. P6 ASJ09798.1     7
 α-amylase 3.2.1.1 Thermococcus sp. Rt3 AAB87860.1
ACH26212.1
O50200   7
 α-amylase (Amy) 3.2.1.1 Thermococcus thioreducens AAT11125.1 Q66SB4   7
 A3L14_00190   Thermococcus thioreducens OGL-20P ASJ11397.1     7
Bacteria
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 Calkro_2177   Caldicellulosiruptor kronotskyensis 2002 ADQ47015.1 E4SGZ0   7
 Calow_0294   Caldicellulosiruptor owensensis OL ADQ03895.1 E4Q359   7
 CGC47_06505   Capnocytophaga canimorsus 7120 ATA77254.1     7
 Ccan_22280 (Bla)   Capnocytophaga canimorsus Cc5 AEK24343.1     7
 CGC54_06485   Capnocytophaga canimorsus H3936 ATA94000.1     7
 CGC56_06725   Capnocytophaga canimorsus H5594 ATA91886.1     7
 AXF12_02095   Capnocytophaga haemolytica CCUG 32990 AMD84430.1     7
 SAMEA44541418_01332 (AmyS)   Capnocytophaga haemolytica NCTC12947 SNV10595.1     7
 CGC53_04725   Capnocytophaga leadbetteri H6253 ATA81701.1     7
 Coch_0631   Capnocytophaga ochracea DSM 7271 ACU92189.1 C7M7T3   7
 CBG49_00375   Capnocytophaga sp. ChDC OS43 ASF41659.1     7
 CGC52_05680   Capnocytophaga sp. H2931 ATA74953.1     7
 CGC49_05925   Capnocytophaga sp. H4358 ATA72859.1     7
 AM608_06725   Capnocytophaga sp. oral taxon 323 str. F0383 ALC97351.1     7
 Ctha_2426   Chloroherpeton thalassium ATCC 35110 ACF14875.1 B3QX65   7
 OK18_03240   Chryseobacterium gallinarum DSM 27622 AKK71784.1     7
 CEQ15_14350   Chryseobacterium indologenes FDAARGOS_337 ASE62591.1     7
 CJF12_18350   Chryseobacterium piperi ATCC BAA-1782 ASW76037.1     7
 ATE47_11975   Chryseobacterium sp. IHB B 17019 ALR31194.1     7
 CHSO_4148   Chryseobacterium sp. StRB126 BAP33185.1     7
 CEY12_10440   Chryseobacterium sp. T16E-39 ASK30499.1     7
 CA2559_00080   Croceibacter atlanticus HTCC2559 EAP87105.1 A3U4D8   7
 SAMN06298216_0723   Cytophagales bacterium TFI 002 SOE20227.1     7
 α-amylase, partial (Amy16)   Flammeovirga pacifica WPAGA1 AKJ26156.1     7
 MY04_3248   Flammeovirga sp. MY04 ANQ50613.1     7
 α-amylase (FSA)   Flavobacteriaceae bacterium BPA / 5DNS001 AGD88873.1     7
 UJ101_02334   Flavobacteriaceae bacterium UJ101 APD07834.1     7
 UJ101_01162   Flavobacteriaceae bacterium UJ101 APD06687.1     7
 BB050_00652 (AmyS)   Flavobacterium johnsoniae GSE09 AOC93801.1     7
 Fjoh_1948   Flavobacterium johnsoniae UW101 ABQ04980.1 A5FII4   7
 ALW18_06450   Flavobacterium psychrophilum Z1 AOE52185.1     7
 AMR72_06460   Flavobacterium psychrophilum Z2 ALM48568.1     7
 SAMN04487764_3183   Gillisia sp. Hel1_33_143 SDS83390.1     7
 GRFL_0201   Gramella flava JLT2011 APU66925.1     7
 GRFL_2435   Gramella flava JLT2011 APU69159.1     7
 orf2122   Gramella forsetii KT0803 CAL67106.1 A0M3B1   7
 LPB144_01590   Gramella sp. LPB0144 APG59177.1     7
 LPB144_06405   Gramella sp. LPB0144 APG60068.1     7
 SAMN04488553_0218   Gramella sp. MAR_2010_147 SDR67666.1     7
 SAMN04488553_2877   Gramella sp. MAR_2010_147 SDS69681.1     7
 AciX9_1331   Granulicella tundricola MP5ACTX9 ADW68393.1     7
 Hore_18730   Halothermothrix orenii H 168 ACL70622.1 B8CZA3   7
 Lbys_2308   Leadbetterella byssophila DSM 17132 ADQ17984.1 E4RVT5   7
 Lupro_04465   Lutibacter profundi LP1 AMC10538.1     7
 Ftrac_0472   Marivirga tractuosa DSM 4126 ADR20477.1 E4TP74   7
 MgSA37_01758   Mucilaginibacter gotjawali SA3-7 BAU53589.1     7
 AY601_1910   Pedobacter cryoconitis PAMC 27485 AMP98817.1     7
 AO058_10120   Salegentibacter sp. T436 APS39205.1     7
 TJEJU_1257 (SusA)   Tenacibaculum jejuense KCTC 22618 SNR14997.1     7
 Terro_1447   Terriglobus roseus DSM 18391 AFL87755.1     7
 SAMN05444167_1973   Terriglobus roseus GAS232 SDF29322.1     7
 AciPR4_2183   Terriglobus saanensis SP1PR4 ADV82985.1 E1N5L1   7
 α-amylase, glycoside hydrolase family GH13-7   uncultured bacterium AOE07240.1     7
 zobellia_369 (SusA)   Zobellia galactanivorans DsiJT CAZ94442.1     7
 ZPR_2825   Zunongwangia profunda SM-A87 ADF53145.1 D5BG32   7
unclassified
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 α-amylase (BD5063) 3.2.1.1 uncultured organism AAM48114.1
ACH26097.1
Q8JZK3   7
 Sequence 2 from patent US 7407677.   unidentified ACH26058.1     7
 Sequence 4 from patent US 7407677.   unidentified ACH26059.1     7
 Sequence 6 from patent US 7407677.   unidentified ACH26060.1     7
 Sequence 10 from patent US 7407677.   unidentified ACH26063.1     7
 Sequence 12 from patent US 7407677.   unidentified ACH26064.1     7
 Sequence 14 from patent US 7407677.   unidentified ACH26065.1     7
 Sequence 16 from patent US 7407677.   unidentified ACH26066.1     7
 Sequence 18 from patent US 7407677.   unidentified ACH26067.1     7
 Sequence 20 from patent US 7407677.   unidentified ACH26068.1     7
 Sequence 22 from patent US 7407677.   unidentified ACH26069.1     7
 Sequence 24 from patent US 7407677.   unidentified ACH26070.1     7
 Sequence 26 from patent US 7407677.   unidentified ACH26071.1     7
 Sequence 28 from patent US 7407677.   unidentified ACH26072.1     7
 Sequence 30 from patent US 7407677.   unidentified ACH26073.1     7
 Sequence 32 from patent US 7407677.   unidentified ACH26074.1     7
 Sequence 34 from patent US 7407677.   unidentified ACH26075.1     7
 Sequence 36 from patent US 7407677.   unidentified ACH26076.1     7
 Sequence 38 from patent US 7407677.   unidentified ACH26077.1     7
 Sequence 40 from patent US 7407677.   unidentified ACH26078.1     7
 Sequence 42 from patent US 7407677.   unidentified ACH26079.1     7
 Sequence 44 from patent US 7407677.   unidentified ACH26080.1     7
 Sequence 46 from patent US 7407677.   unidentified ACH26081.1     7
 Sequence 48 from patent US 7407677.   unidentified ACH26082.1     7
 Sequence 52 from patent US 7407677.   unidentified ACH26084.1     7
 Sequence 54 from patent US 7407677.   unidentified ACH26085.1     7
 Sequence 56 from patent US 7407677.   unidentified ACH26086.1     7
 Sequence 58 from patent US 7407677.   unidentified ACH26087.1     7
 Sequence 60 from patent US 7407677.   unidentified ACH26088.1     7
 Sequence 62 from patent US 7407677.   unidentified ACH26089.1     7
 Sequence 64 from patent US 7407677.   unidentified ACH26090.1     7
 Sequence 66 from patent US 7407677.   unidentified ACH26091.1     7
 Sequence 68 from patent US 7407677.   unidentified ACH26092.1     7
 Sequence 72 from patent US 7407677.   unidentified ACH26094.1     7
 Sequence 74 from patent US 7407677.   unidentified ACH26095.1     7
 Sequence 76 from patent US 7407677.   unidentified ACH26096.1     7
 Sequence 84 from patent US 7407677.   unidentified ACH26100.1     7
 Sequence 86 from patent US 7407677.   unidentified ACH26101.1     7
 Sequence 110 from patent US 7407677.   unidentified ACH26113.1     7
 Sequence 112 from patent US 7407677.   unidentified ACH26114.1     7
 Sequence 116 from patent US 7407677.   unidentified ACH26116.1     7
 Sequence 126 from patent US 7407677.   unidentified ACH26121.1     7
 Sequence 130 from patent US 7407677.   unidentified ACH26123.1     7
 Sequence 318 from patent US 7407677.   unidentified ACH26215.1     7
Top




Last update: 2017-10-09 © Copyright 1998-2017
AFMB - CNRS - Université d'Aix-Marseille