Glycoside Hydrolase Family 13 / Subf 5

Activities in Familyα-amylase (EC 3.2.1.1); pullulanase (EC 3.2.1.41); cyclomaltodextrin glucanotransferase (EC 2.4.1.19); cyclomaltodextrinase (EC 3.2.1.54); trehalose-6-phosphate hydrolase (EC 3.2.1.93); oligo-α-glucosidase (EC 3.2.1.10); maltogenic amylase (EC 3.2.1.133); neopullulanase (EC 3.2.1.135); α-glucosidase (EC 3.2.1.20); maltotetraose-forming α-amylase (EC 3.2.1.60); isoamylase (EC 3.2.1.68); glucodextranase (EC 3.2.1.70); maltohexaose-forming α-amylase (EC 3.2.1.98); maltotriose-forming α-amylase (EC 3.2.1.116); branching enzyme (EC 2.4.1.18); trehalose synthase (EC 5.4.99.16); 4-α-glucanotransferase (EC 2.4.1.25); maltopentaose-forming α-amylase (EC 3.2.1.-) ; amylosucrase (EC 2.4.1.4) ; sucrose phosphorylase (EC 2.4.1.7); malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141); isomaltulose synthase (EC 5.4.99.11); malto-oligosyltrehalose synthase (EC 5.4.99.15); amylo-α-1,6-glucosidase (EC 3.2.1.33); α-1,4-glucan: phosphate α-maltosyltransferase (EC 2.4.99.16); amino acid transporter; [retaining] sucrose 6(F)-phosphate phosphorylase (EC 2.4.1.329); [retaining] glucosylglycerol phosphorylase (EC 2.4.1.359);
Activities in Sub Family
Mechanism Retaining
ClanGH-H
3D Structure Status( β / α ) 8
Catalytic Nucleophile/BaseAsp (experimental)
Catalytic Proton DonorGlu (experimental)
NoteNew: many members have been assigned to subfamilies as described by Stam et al. (2006) Protein Eng Des Sel. 19, 555-562 (PMID: 17085431)
External resourcesCAZypedia; EBI Protein of the Month; HOMSTRAD; PDB Molecule of the Month; PRINTS;
Commercial Enzyme Provider(s)MEGAZYME; PROZOMIX;
Statistics GenBank accession (3967); Uniprot accession (238); PDB accession (27); 3D entries (10); cryst (0)
All (3684) Archaea (2) Bacteria (3614) Eukaryota (59) unclassified (9) Structure (10) Characterized (50)
| 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | ... | 37 |
Bacteria
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 AM1_2293   Acaryochloris marina MBIC11017 ABW27303.1 B0C202   5
 CLOST_0052 (AmyA)   Acetoanaerobium sticklandii DSM 519 CBH20182.1     5
 DOZ58_14310   Acetobacterium sp. KB-1 AWW27707.1     5
 NCTC11636_01002 (AmyS)   Actinomyces howellii NCTC11636 VEG27379.1     5
 AN27039_0153 (fragment)   Actinomyces naeslundii ATCC 27039 BAV83223.1     5
 AN27039_0152 (fragment)   Actinomyces naeslundii ATCC 27039 BAV83222.1     5
 AXE84_01530   Actinomyces oris T14V AMD98267.1     5
 FBF36_03825   Actinomyces sp. oral taxon 171 str. F0337 QCT32703.1     5
 AM609_02535   Actinomyces sp. oral taxon 414 F0588 ALC98635.1     5
 NCTC10951_00115 (AmyS)   Actinomyces viscosus NCTC10951 VEI14262.1     5
 CL176_12005   Aerococcaceae bacterium ZY16052 AXY26664.1     5
 AWM72_03790   Aerococcus sanguinicola CCUG43001 AMB93942.1     5
 HMPREF9243_0995   Aerococcus urinae ACS-120-V-Col10a AEA00598.1     5
 AWM73_04790   Aerococcus urinae CCUG36881 AMB95866.1     5
 AWM74_04915   Aerococcus urinaeequi CCUG28094 AMB97609.1     5
 APT62_09220   Aerococcus urinaeequi USDA-ARS-USMARC-56713 ALZ88615.1     5
 AWM75_04430   Aerococcus urinaehominis CCUG42038B AMB99293.1     5
 AWM76_00930   Aerococcus viridans CCUG4311 AMC00234.1     5
 E2P79_13670   Aeromonas schubertii LF1708 QCG48743.1     5
 WL1483_3007 (PulA) (fragment)   Aeromonas schubertii WL1483 ALP42426.1     5
 At12D13_35530 (AmyA)   Agrobacterium fabrum 12D13 AYM64711.1     5
 At1D132_36790 (AmyA)   Agrobacterium fabrum 1D132 AYM59690.1     5
 Atu3914 / AGR_L_1863 (AmyA)   Agrobacterium fabrum str. C58 AAK89505.2
AAK89505.1
AAL44722.1
NP_356720.2
NP_534406.1
Q7CTL9   5
 CFBP5473_14775 (AmyA)   Agrobacterium larrymoorei CFBP5473 QCI99288.1     5
 B0909_18475   Agrobacterium rhizogenes K599 AQS64276.1     5
 EYD00_18580   Agrobacterium sp. 33MFTa1.1 QBJ15456.1     5
 AGROH133_12461   Agrobacterium sp. H13-3 ADY67007.1     5
 At12D1_38040 (AmyA)   Agrobacterium tumefaciens 12D1 AYM83688.1     5
 At15955_36250 (AmyA)   Agrobacterium tumefaciens 15955 AYM18610.1     5
 DC439_19125   Agrobacterium tumefaciens 183 QAA99872.1     5
 CG010_019855 (AmyA)   Agrobacterium tumefaciens 186 QDY96417.1     5
 At1D1108_36770 (AmyA)   Agrobacterium tumefaciens 1D1108 AYM13303.1     5
 At1D1460_37340 (AmyA)   Agrobacterium tumefaciens 1D1460 AYM07975.1     5
 At1D1609_40200 (AmyA)   Agrobacterium tumefaciens 1D1609 AVH44067.1     5
 AtA6_36930 (AmyA)   Agrobacterium tumefaciens A6 AYM69909.1     5
 Ach5_36940 (AmyA)   Agrobacterium tumefaciens Ach5 AKC09467.1     5
 CFBP5499_20305 (AmyA)   Agrobacterium tumefaciens CFBP5499 QCL75815.1     5
 CFBP5877_19830 (AmyA)   Agrobacterium tumefaciens CFBP5877 QCL81375.1     5
 CFBP6623_19855 (AmyA)   Agrobacterium tumefaciens CFBP6623 QCL91445.1     5
 CFBP6624_19770 (AmyA)   Agrobacterium tumefaciens CFBP6624 QCM02431.1     5
 CFBP6625_19850 (AmyA)   Agrobacterium tumefaciens CFBP6625 QCM12665.1     5
 CFBP6626_19155 (AmyA)   Agrobacterium tumefaciens CFBP6626 QCM07464.1     5
 CFBP7129_19630 (AmyA)   Agrobacterium tumefaciens CFBP7129 QCL96444.1     5
 X971_3849 (fragment)   Agrobacterium tumefaciens LBA4213 (Ach5) AHK03705.1     5
 AWN88_06585   Agrobacterium tumefaciens S33 AMD57882.1     5
 EYB66_08330   Akkermansia muciniphila 139 QBH17995.1     5
 CUB89_08735   Akkermansia muciniphila AMDK-1 AYR28642.1     5
 C1I94_10420   Akkermansia muciniphila AMDK-10 QAA41957.1     5
 C1I96_10030   Akkermansia muciniphila AMDK-11 QAA44258.1     5
 C1O37_07545   Akkermansia muciniphila AMDK-12 QAA46113.1     5
 C1O40_10440   Akkermansia muciniphila AMDK-13 QAA49379.1     5
 C1O47_10185   Akkermansia muciniphila AMDK-14 QAA51208.1     5
 C1O50_10155   Akkermansia muciniphila AMDK-15 QAA53515.1     5
 C1O51_10135   Akkermansia muciniphila AMDK-16 QAA55825.1     5
 C1O54_10115   Akkermansia muciniphila AMDK-17 QAA58140.1     5
 C1O57_10155   Akkermansia muciniphila AMDK-18 QAA60959.1     5
 C1O59_09810   Akkermansia muciniphila AMDK-19 QAA63211.1     5
 CUC06_09765   Akkermansia muciniphila AMDK-2 AYR35632.1     5
 C1O60_09855   Akkermansia muciniphila AMDK-20 QAA64968.1     5
 C1O61_09985   Akkermansia muciniphila AMDK-21 QAA67233.1     5
 C1O62_09920   Akkermansia muciniphila AMDK-22 QAA69488.1     5
 CUB96_06145   Akkermansia muciniphila AMDK-3 AYR30463.1     5
 CUC01_09215   Akkermansia muciniphila AMDK-4 AYR33242.1     5
 C1I88_10095   Akkermansia muciniphila AMDK-7 QAA37217.1     5
 C1I90_10230   Akkermansia muciniphila AMDK-8 QAA39582.1     5
 Amuc_1812   Akkermansia muciniphila ATCC BAA-835 ACD05630.1 B2UN19   5
 AKKM5201_10580   Akkermansia muciniphila CBA5201 QAT92819.1     5
 FU653_09175   Akkermansia muciniphila DSM 22959 QEE55527.1     5
 SI90_04410   Akkermansia muciniphila H2 QAR51131.1     5
 A4V05_04890   Akkermansia muciniphila YL44 ANU60822.1
ASB36365.1
    5
 α-amylase 3.2.1.1 Alicyclobacillus sp. 18711 AWX66236.1   6GXV[A,B]
6GYA[A,B,C,D]
5
 AWOD_II_1272 (AmyS)   Aliivibrio wodanis CED57885.1     5
 Alfi_1768   Alistipes finegoldii DSM 17242 AFL78098.1     5
 A3BBH6_09240   Alistipes sp. 3BBH6 BBL00688.1     5
 A5CPYCFAH4_09160   Alistipes sp. 5CPYCFAH4 BBL08692.1     5
 A5NYCFA2_09170   Alistipes sp. 5NYCFAH2 BBL11484.1     5
 Amy   Alkalibacterium sp. SL3 QBL14388.1     5
 α-amylase (Amy1;AmyA;AmyB) 3.2.1.1 Alkalimonas amylolytica N10 AAQ01675.1 Q6WUB6   5
 CDL62_10310   Alkalitalea saponilacus DSM 24412 ASB49504.1     5
 Anacy_4839   Anabaena cylindrica PCC 7122 AFZ60182.1     5
 Apre_1537   Anaerococcus prevotii DSM 20548 ACV29558.1 C7REE5   5
 BEQ56_04665   Anaerolineaceae bacterium oral taxon 439 W11661 AOH42828.1     5
 GFC30_468 (AmyS)   Anoxybacillus amylolyticus DSM 15939 ANB59369.1     5
 α-amylase (AFA;AMY1048) 3.2.1.1 Anoxybacillus flavithermus CAL14744.1     5
 AF2641_03980   Anoxybacillus flavithermus DSM 2641T AST06092.1     5
 B379_07815   Anoxybacillus kamchatkensis G10 AXM89060.1     5
 α-amylase   Arthrospira platensis AV ADQ43301.2
ADQ43301.1
E5LCI2   5
 NIES39_Q00120   Arthrospira platensis NIES-39 BAI94020.1 D4ZNX2   5
 AP285_27485   Arthrospira platensis YZ AMW31106.1     5
 alpha amylase (A-amyA)   Arthrospira sp. SRM16 SMN35248.1     5
 NCTC12129_03241 (Amya_1) (fragment)   Atlantibacter hermannii NCTC12129 VDZ74113.1     5
 NCTC12129_03243 (Amya_3) (fragment)   Atlantibacter hermannii NCTC12129 VDZ74115.1     5
 NCTC12129_03242 (Amya_2) (fragment)   Atlantibacter hermannii NCTC12129 VDZ74114.1     5
 NIES50_01220   Aulosira laxa NIES-50 BAZ71579.1     5
 Sequence 8 from patent US 5171673   Bacillus AAQ68477.1     5
 Sequence 6 from patent US 5171673   Bacillus AAQ68475.1     5
 α-amylase (fragment) 3.2.1.1 Bacillus acidicola TSAS1 AEW07376.1     5
 α-amylase (Amy1;AmyQ;BAA) 3.2.1.1 Bacillus amyloliquefaciens AAA22191.1
AAE12381.1
AAE13947.1
AAE37101.1
AAE59727.1
AAE62349.1
AAN20003.1
AAN27445.1
AAN99911.1
AAP02211.1
AAR63623.1
AAR76030.1
AAS26291.1
AAY72173.1
ABJ43095.1
ABJ43099.1
ABN29369.1
ACK07344.1
ACP75069.1
ACS10035.1
ACW26904.1
CAA01489.1
CAA23430.1
CAC16484.1
CAC88551.1
CAD19035.1
CAD20678.1
CAD26702.1
CAD67517.1
CAD88112.1
P00692 3BH4[A,B] 5
 α-amylase 3.2.1.1 Bacillus amyloliquefaciens ATCC 23842 ADE44086.1 D5KR60   5
 BAMF_1635 (AmyA)   Bacillus amyloliquefaciens DSM 7 = ATCC 23350 CBI42761.1 E1UTG0   5
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