Glycoside Hydrolase Family 13 / Subf 39

Activities in Familyα-amylase (EC 3.2.1.1); pullulanase (EC 3.2.1.41); cyclomaltodextrin glucanotransferase (EC 2.4.1.19); cyclomaltodextrinase (EC 3.2.1.54); trehalose-6-phosphate hydrolase (EC 3.2.1.93); oligo-α-glucosidase (EC 3.2.1.10); maltogenic amylase (EC 3.2.1.133); neopullulanase (EC 3.2.1.135); α-glucosidase (EC 3.2.1.20); maltotetraose-forming α-amylase (EC 3.2.1.60); isoamylase (EC 3.2.1.68); glucodextranase (EC 3.2.1.70); maltohexaose-forming α-amylase (EC 3.2.1.98); maltotriose-forming α-amylase (EC 3.2.1.116); branching enzyme (EC 2.4.1.18); trehalose synthase (EC 5.4.99.16); 4-α-glucanotransferase (EC 2.4.1.25); maltopentaose-forming α-amylase (EC 3.2.1.-) ; amylosucrase (EC 2.4.1.4) ; sucrose phosphorylase (EC 2.4.1.7); malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141); isomaltulose synthase (EC 5.4.99.11); malto-oligosyltrehalose synthase (EC 5.4.99.15); amylo-α-1,6-glucosidase (EC 3.2.1.33); α-1,4-glucan: phosphate α-maltosyltransferase (EC 2.4.99.16); 6'-P-sucrose phosphorylase (EC 2.4.1.-); amino acid transporter
Activities in Sub Family
Mechanism Retaining
ClanGH-H
3D Structure Status( β / α ) 8
Catalytic Nucleophile/BaseAsp (experimental)
Catalytic Proton DonorGlu (experimental)
NoteNew: many members have been assigned to subfamilies as described by Stam et al. (2006) Protein Eng Des Sel. 19, 555-562 (PMID: 17085431)
External resourcesCAZypedia; EBI Protein of the Month; HOMSTRAD; PDB Molecule of the Month; PRINTS;
Commercial Enzyme Provider(s)MEGAZYME; PROZOMIX;
Statistics GenBank accession (359); Uniprot accession (72);
| 1 | 2 | 3 | 4 |
Bacteria
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 CLOST_0971   Acetoanaerobium sticklandii DSM 519 CBH21094.1     39
 Awo_c03460 (AmyB)   Acetobacterium woodii DSM 1030 AFA47147.1     39
 Acfer_0405   Acidaminococcus fermentans DSM 20731 ADB46808.1 D2RP32   39
 ADH66_14400   Acutalibacter muris KB18 ASB42775.1     39
 amylase-pullulanase (Amy;Aaci_2874) 3.2.1.1
3.2.1.41
Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 ACV59878.1
CAA44638.1
CAZ78868.1
C8WUR2
Q06307
  39
 TC41_3217   Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1 AEJ45097.1     39
 α-amylase (AmyA4) 3.2.1.1 Alicyclobacillus sp. A4 / CGMCC 3147 ADZ99363.1     39
 Amet_2944   Alkaliphilus metalliredigens QYMF ABR49094.1 A6TSC6   39
 ANT_30520   Anaerolinea thermophila UNI-1 BAJ65078.1     39
 DO83_11500   Anaerostipes hadrus BPB5 AQP40143.1     39
 GFC30_469 (ApU)   Anoxybacillus amylolyticus DSM 15939 ANB61061.1     39
 AF2641_04165   Anoxybacillus flavithermus DSM 2641T AST06126.1     39
 Aflv_2609   Anoxybacillus flavithermus WK1 ACJ34962.1 B7GKY4   39
 AFK25_13355   Anoxybacillus gonensis G2 AKS39528.1     39
 Apar_1046   Atopobium parvulum DSM 20469 ACV51474.1 C8W7N3   39
 amylase-pullulanase (AapT) 3.2.1.1
3.2.1.41
Bacillus sp. XAL601 BAA05832.1 Q45643   39
 CL2_07800   butyrate-producing bacterium SSC/2 CBL37811.1 D4MYW6   39
 CLDAP_27060   Caldilinea aerophila DSM 14535 = NBRC 104270 BAM00746.1     39
 CLDAP_19170   Caldilinea aerophila DSM 14535 = NBRC 104270 BAL99956.1     39
 Q783_07995   Carnobacterium inhibens subsp. gilichinskyi WN1359 AGY82130.1     39
 CAR_c17380 (fragment)   Carnobacterium sp. 17-4 AEB30396.1     39
 NY10_1127   Carnobacterium sp. CP1 ALV21736.1     39
 Caur_0705   Chloroflexus aurantiacus J-10-fl ABY33944.1
CAZ78820.1
A9WFK6   39
 Chy400_0761   Chloroflexus sp. Y-400-fl ACM52191.1 B9LKD4   39
 BN1096_340008   Clostridioides difficile CDS84395.1     39
 TW87_07045   Clostridioides difficile 08ACD0030 AMM56264.1     39
 CD0886   Clostridioides difficile 630 CAJ67719.1
AJP10558.1
Q18A77   39
 CDIF630erm_01006 (AmyB)   Clostridioides difficile 630 delta erm ARE61785.1     39
 CD630DERM_08860   Clostridioides difficile 630Derm CEJ97433.1     39
 BN1095_630009   Clostridioides difficile 7032989 CDT66671.1     39
 BN1097_350010   Clostridioides difficile 7032994 CDS84838.1     39
 CDIF1296T_01052   Clostridioides difficile ATCC 9689 = DSM 1296 AKP41939.1     39
 BZ168_13520   Clostridioides difficile BR81 AQU10635.1     39
 CD196_0836   Clostridioides difficile CD196 CBA61597.1 C9XMB6   39
 CGC51_04920   Clostridioides difficile DH/NAP11/106/ST-42 ASN88667.1     39
 A6J95_05310   Clostridioides difficile FDAARGOS_267 ARC14442.1     39
 ERS445050_02811 (ApU)   Clostridioides difficile NCTC13307 CKH55004.1     39
 CDR20291_0816   Clostridioides difficile R20291 CBE02886.1 C9YJR6   39
 PCZ31_0905 (ApU)   Clostridioides difficile Z31 ALP02849.1     39
 CACET_c33780   Clostridium aceticum DSM 1496 AKL96821.1     39
 CIBE_5925   Clostridium beijerinckii CUU51005.1     39
 Cbs_4906   Clostridium beijerinckii ATCC 35702 SA-1 AIU01760.1     39
 CLBIJ_52340 (ApU)   Clostridium beijerinckii BAS/B3/I/124 AQS07770.1     39
 LF65_07045   Clostridium beijerinckii NCIMB 14988 AMK50520.1     39
 Cbei_4906   Clostridium beijerinckii NCIMB 8052 ABR37012.1 A6M332   39
 X276_01030   Clostridium beijerinckii NRRL B-598 ALB43962.1     39
 CM240_1890   Clostridium bornimense M2/40 CDM69048.1     39
 U728_2335   Clostridium botulinum 202F AIY81730.1     39
 CB17B3322   Clostridium botulinum B str. Eklund 17B (NRP) CDH92311.1     39
 CLL_A3414   Clostridium botulinum B str. Eklund 17B (NRP) ACD21882.1 B2TR26   39
 CbC4_1474   Clostridium botulinum BKT015925 AEB76153.1     39
 CLH_3164   Clostridium botulinum E3 str. Alaska E43 ACD51807.1 B2V047   39
 ST13_14965   Clostridium botulinum NCTC 8266 AJF30956.1     39
 ST12_14965   Clostridium botulinum NCTC 8550 AJF34018.1     39
 NPD4_574   Clostridium butyricum CDC_51208 APF24603.1     39
 ATD26_16080   Clostridium butyricum JKY6D1 ALS18336.1     39
 ATN24_00470   Clostridium butyricum KNU-L09 ALP88731.1     39
 BBB49_15415   Clostridium butyricum TK520 AOR95409.1     39
 AZ909_15820   Clostridium butyricum TOA ANF15461.1     39
 Ccar_01220   Clostridium carboxidivorans P7 AKN29535.1     39
 BJL90_02305   Clostridium formicaceticum ATCC 27076 AOY74890.1     39
 CLFO_37010 (ApU)   Clostridium formicaceticum DSM 92 ARE89294.1     39
 CKL_3495 (ApU)   Clostridium kluyveri DSM 555 EDK35486.1     39
 BS101_19750   Clostridium kluyveri JZZ APM40782.1     39
 CKR_3083   Clostridium kluyveri NBRC 12016 BAH08134.1 B9DWP1   39
 BXT91_00550   Clostridium perfringens CP15 AQW22457.1     39
 BXT94_00445   Clostridium perfringens Del1 AQW25345.1     39
 BG908_03150   Clostridium perfringens EHE-NE18 ASY50695.1     39
 FORC3_0072   Clostridium perfringens FORC_003 ALG47449.1     39
 FORC25_0069   Clostridium perfringens FORC_025 AOY52493.1     39
 JFP55_00445   Clostridium perfringens JP55 AMN31468.1     39
 JFP838_00450   Clostridium perfringens JP838 AMN34294.1     39
 CMR01_14825   Clostridium perfringens LLY_N11 ATD50001.1     39
 CPR_0084   Clostridium perfringens SM101 ABG86305.1 Q0SWY8   39
 CPE0066   Clostridium perfringens str. 13 BAB79772.1
CAY02923.1
CAZ78718.1
NP_560982.1
Q8XP99   39
 CSACC_43490 (ApU)   Clostridium saccharobutylicum BAS/B3/SW/136 AQS02499.1     39
 CLSA_c43790   Clostridium saccharobutylicum DSM 13864 AGX45322.1     39
 CLOSACC_43490 (ApU)   Clostridium saccharobutylicum NCP 195 AQS16482.1     39
 CLOSC_43440 (ApU)   Clostridium saccharobutylicum NCP 200 AQR92597.1     39
 CLOBY_42780 (ApU)   Clostridium saccharobutylicum NCP 258 AQS12101.1     39
 Cspa_c55800 (AmyB)   Clostridium saccharoperbutylacetonicum N1-4(HMT) AGF59311.1     39
 CLSAP_53290 (ApU)   Clostridium saccharoperbutylacetonicum N1-504 AQR97982.1     39
 CSCA_2673   Clostridium scatologenes ATCC 25775 AKA69798.1     39
 BGI42_13630   Clostridium taeniosporum 1/k AOR24713.1     39
 CTK_C29870   Clostridium tyrobutyricum KCTC 5387 AND86225.1     39
 BA182_13890   Clostridium tyrobutyricum W428 ANP70716.1     39
 COPRO5265_0073   Coprothermobacter proteolyticus DSM 5265 ACI17347.1
ACI17347.2
B5Y6P8   39
 Corgl_1074   Coriobacterium glomerans PW2 AEB07182.1     39
 Desde_2650   Desulfitobacterium dehalogenans ATCC 51507 AFM00967.1     39
 Desdi_2209   Desulfitobacterium dichloroeliminans LMG P-21439 AGA69642.1     39
 DPCES_2231   Desulfitobacterium hafniense CDX02118.1     39
 Dhaf_3195   Desulfitobacterium hafniense DCB-2 ACL21215.1
CAZ78852.1
B8G1G2   39
 DSY2035   Desulfitobacterium hafniense Y51 BAE83824.1 Q24VW8   39
 DESME_08205   Desulfitobacterium metallireducens DSM 15288 853-15A AHF07053.1     39
 Desaci_0650   Desulfosporosinus acidiphilus SJ4 AFM39712.1     39
 Desor_2280   Desulfosporosinus orientis DSM 765 AET67877.1     39
 B0537_07160   Desulfotomaculum ferrireducens GSS09 AQS58883.1     39
 Desca_0951   Desulfotomaculum nigrificans CO-1-SRB AEF93827.1     39
 Dred_1458   Desulfotomaculum reducens MI-1 ABO49988.1 A4J4I5   39
 Desru_2584   Desulfotomaculum ruminis DSM 2154 AEG60811.1     39
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