Glycoside Hydrolase Family 13 / Subf 29

Activities in Familyα-amylase (EC 3.2.1.1); pullulanase (EC 3.2.1.41); cyclomaltodextrin glucanotransferase (EC 2.4.1.19); cyclomaltodextrinase (EC 3.2.1.54); trehalose-6-phosphate hydrolase (EC 3.2.1.93); oligo-α-glucosidase (EC 3.2.1.10); maltogenic amylase (EC 3.2.1.133); neopullulanase (EC 3.2.1.135); α-glucosidase (EC 3.2.1.20); maltotetraose-forming α-amylase (EC 3.2.1.60); isoamylase (EC 3.2.1.68); glucodextranase (EC 3.2.1.70); maltohexaose-forming α-amylase (EC 3.2.1.98); maltotriose-forming α-amylase (EC 3.2.1.116); branching enzyme (EC 2.4.1.18); trehalose synthase (EC 5.4.99.16); 4-α-glucanotransferase (EC 2.4.1.25); maltopentaose-forming α-amylase (EC 3.2.1.-) ; amylosucrase (EC 2.4.1.4) ; sucrose phosphorylase (EC 2.4.1.7); malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141); isomaltulose synthase (EC 5.4.99.11); malto-oligosyltrehalose synthase (EC 5.4.99.15); amylo-α-1,6-glucosidase (EC 3.2.1.33); α-1,4-glucan: phosphate α-maltosyltransferase (EC 2.4.99.16); 6'-P-sucrose phosphorylase (EC 2.4.1.-); amino acid transporter
Activities in Sub Family
Mechanism Retaining
ClanGH-H
3D Structure Status( β / α ) 8
Catalytic Nucleophile/BaseAsp (experimental)
Catalytic Proton DonorGlu (experimental)
NoteNew: many members have been assigned to subfamilies as described by Stam et al. (2006) Protein Eng Des Sel. 19, 555-562 (PMID: 17085431)
External resourcesCAZypedia; EBI Protein of the Month; HOMSTRAD; PDB Molecule of the Month; PRINTS;
Commercial Enzyme Provider(s)MEGAZYME; PROZOMIX;
Statistics GenBank accession (3365); Uniprot accession (296); PDB accession (2); 3D entries (1); cryst (0)
| 1 | 2 | 3 | 4 |
Bacteria
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 PO26_10020   Vibrio anguillarum 178/90 AQM26897.1     29
 PN39_10280   Vibrio anguillarum 261/91 AQL64616.1     29
 AA407_09215   Vibrio anguillarum 4299 AQM13274.1     29
 PN46_09975   Vibrio anguillarum 51/82/2 AQL81790.1     29
 PL15_10355   Vibrio anguillarum 601/90 AQL92279.1     29
 PN38_09940   Vibrio anguillarum 6018/1 AQM06454.1     29
 VAA_01141+VAA_01140   Vibrio anguillarum 775 AEH33759.1
AEH33760.1
    29
 PO30_10235   Vibrio anguillarum 87-9-116 AQL85310.1     29
 CEA93_04515 (TreC)   Vibrio anguillarum 87-9-116 ASF91320.1     29
 PO31_09955   Vibrio anguillarum 87-9-117 AQL88751.1     29
 PL14_03960   Vibrio anguillarum 90-11-286 ANJ22392.1     29
 QR76_10305   Vibrio anguillarum 90-11-287 AQM34717.1     29
 PO28_10460   Vibrio anguillarum 9014/8 AQL74965.1     29
 PL84_10035   Vibrio anguillarum 91-7154 AQL99415.1     29
 PN47_09950   Vibrio anguillarum 91-8-178 AQL68028.1     29
 PN41_09930   Vibrio anguillarum A023 AQL71510.1     29
 PN48_10295   Vibrio anguillarum Ba35 AQL61194.1     29
 CEQ50_04660 (TreC)   Vibrio anguillarum CNEVA NB11008 ASG06874.1     29
 PL85_09870   Vibrio anguillarum DSM 21597 AQM02941.1     29
 PO29_09700   Vibrio anguillarum HI610 AQM16577.1     29
 CEJ46_04460 (TreC)   Vibrio anguillarum JLL237 ASG03118.1     29
 PN43_09945   Vibrio anguillarum LMG12010 AQM23434.1     29
 N175_11050   Vibrio anguillarum M3 AGU58165.1     29
 CG015_05020 (TreC)   Vibrio anguillarum MHK3 ASO28680.1     29
 A6A12_0630 (TreC)   Vibrio anguillarum MVAV6203 ARV25762.1     29
 VANGNB10_cI0788 (TreA)   Vibrio anguillarum NB10 CDQ49702.1     29
 PN49_09665   Vibrio anguillarum PF4 AQP33225.1     29
 CKY00_14290 (TreC)   Vibrio anguillarum PF4 AUB88449.1     29
 PN51_09710   Vibrio anguillarum PF430-3 AQM20049.1     29
 AA909_09655   Vibrio anguillarum PF7 AQP36604.1     29
 PO25_09670   Vibrio anguillarum S2 2/9 AQM30227.1     29
 CEG15_04010 (TreC)   Vibrio anguillarum S3 4/9 ASF99351.1     29
 PN44_10260   Vibrio anguillarum T265 AQL78401.1     29
 PL83_10230   Vibrio anguillarum VA1 AQL95941.1     29
 AA405_10050   Vibrio anguillarum VIB 18 AQM63401.1     29
 AA406_10455   Vibrio anguillarum VIB 93 AQM10054.1     29
 CMV05_04760 (TreC)   Vibrio anguillarum VIB12 ATC57018.1     29
 CK207_04870 (TreC)   Vibrio anguillarum VIB43 ASW80475.1     29
 VEA_004234   Vibrio antiquarius EX25 ACY52392.1 A7K619   29
 Vca1114GL_01298 (TreA)   Vibrio campbellii 1114GL AQM67808.1     29
 Vc3S01_2535 (TreC)   Vibrio campbellii 20130629003S01 ARR07296.1     29
 VIBHAR_01206   Vibrio campbellii ATCC BAA-1116 AGU94436.1
ABU70195.1
A7MYA2   29
 A8140_03715   Vibrio campbellii CAIM 519 = NBRC 15631 ATCC 25920, CAIM 519T ARV71879.1     29
 CAY59_13620   Vibrio campbellii LA16-V1 ARR45295.1     29
 BWP24_13325   Vibrio campbellii LMB29 APX07081.1     29
 VAB027_1547 (TreC)   Vibrio cholerae 10432-62 AKB05814.1     29
 VAA049_2833 (TreC)   Vibrio cholerae 1154-74 AKB02066.1     29
 EN18_07900   Vibrio cholerae 2012EL-2176 AIT28973.1     29
 NH62_20430 (TreC)   Vibrio cholerae 2012Env-9 AOY46688.1     29
 BBB50_10040   Vibrio cholerae 2740-80 ANR88005.1     29
 ASZ80_00942   Vibrio cholerae C5 APF48496.1     29
 ASZ81_00936   Vibrio cholerae CRC1106 APF56089.1     29
 ASZ82_00934   Vibrio cholerae CRC711 APF52349.1     29
 ASZ87_00840 (TreA)   Vibrio cholerae E1162 APF63629.1     29
 ASZ88_00912 (TreA)   Vibrio cholerae E1320 APF67306.1     29
 ASZ84_00505   Vibrio cholerae E506 APF59529.1     29
 CSW01_04665 (TreC)   Vibrio cholerae E7946 ATQ45998.1     29
 ASZ79_00965   Vibrio cholerae E9120 APF70993.1     29
 AP033_20430 (TreC)   Vibrio cholerae Env-390 AOY50295.1     29
 A6J62_12640   Vibrio cholerae FDAARGOS_223 ARB81404.1     29
 FORC55_1859   Vibrio cholerae FORC_055 ATD27843.1     29
 AN947_10055   Vibrio cholerae ICDC-VC661 ATD24071.1     29
 O3Y_04235   Vibrio cholerae IEC224 AFC57728.1     29
 VCLMA_A0782   Vibrio cholerae LMA3984-4 AEA78055.1     29
 ASZ83_01962   Vibrio cholerae M2140 APF75835.1     29
 VCM66_0868 (TreC)   Vibrio cholerae M66-2 ACP05186.1 C3LTG0   29
 VCD_003421   Vibrio cholerae MJ-1236 ACQ61581.1 C3NSL4   29
 MS6_0711   Vibrio cholerae MS6 BAP02366.1     29
 ASZ85_00905   Vibrio cholerae NCTC5395 APF78444.1     29
 ASZ86_00958   Vibrio cholerae NCTC9420 APF82390.1     29
 IR04_09910   Vibrio cholerae O1 biovar El Tor FJ147 AJZ99451.1     29
 VC0911   Vibrio cholerae O1 biovar El Tor str. N16961 AAF94073.1
CBF78894.1
NP_230558.1
Q9KTJ1   29
 Vch1786_I0417 (TreC)   Vibrio cholerae O1 str. 2010EL-1786 AET26027.1     29
 N900_09630   Vibrio cholerae O1 str. KW3 ALJ64609.1     29
 VC0395_A0433   Vibrio cholerae O395 ABQ20086.1
ACP08940.1
A5F317   29
 EN12_04465   Vibrio cholerae TSY216 AKO74501.1     29
 BA953_12660   Vibrio coralliilyticus 58 ANW24984.1     29
 JV59_02670   Vibrio coralliilyticus OCN014 AIS54077.1     29
 IX92_11690   Vibrio coralliilyticus RE98 AIW19664.1     29
 A134_05215   Vibrio crassostreae 9CS106 ANP75811.1     29
 AL536_16515   Vibrio fluvialis ATCC 33809 AMF95040.1     29
 vfu_A02669   Vibrio furnissii NCTC 11218 ADT87788.1     29
 BSQ33_13550   Vibrio gazogenes ATCC 43942 ASA57211.1     29
 BG259_16465   Vibrio harveyi APP06813.1     29
 LA59_04395   Vibrio harveyi ATCC 33843 (392 [MAV]) AIV04757.1     29
 AL538_13015   Vibrio harveyi ATCC 43516 AMF98577.1     29
 AL543_13675   Vibrio mimicus ATCC 33654 AMG03965.1     29
 VM_10595   Vibrio mimicus SCCF01 AOW83142.1     29
 BA891_03485   Vibrio natriegens CCUG 16371 ANQ16349.1     29
 BA893_03685   Vibrio natriegens CCUG 16373 ANQ20829.1     29
 BA894_03825   Vibrio natriegens CCUG 16374 ANQ25644.1     29
 PN96_09965   Vibrio natriegens NBRC 15636 = ATCC 14048 = DSM 759 ALR16273.1
ANQ11865.1
    29
 VIBNI_A2727 (TreA)   Vibrio nigripulchritudo SFn1 CCO58774.1     29
 A9237_04850   Vibrio owensii XSBZ03 AQW57472.1     29
 BMI84_03260   Vibrio parahaemolyticus 1682 APU73165.1     29
 AL464_00465   Vibrio parahaemolyticus ATCC 17802 AMG05409.1     29
 VPBB_0682   Vibrio parahaemolyticus BB22OP AGB09191.1     29
 VpaChn25_0669   Vibrio parahaemolyticus CHN25 ANZ09270.1     29
 A6J30_05220   Vibrio parahaemolyticus FDAARGOS_191 ARC18006.1     29
 FORC4_0665   Vibrio parahaemolyticus FORC_004 ALM65638.1     29
 FORC6_0590   Vibrio parahaemolyticus FORC_006 ALG50916.1     29
 FORC8_2228   Vibrio parahaemolyticus FORC_008 AKU55788.1     29
 FORC14_0738   Vibrio parahaemolyticus FORC_014 ANB97903.1     29
 FORC18_2232   Vibrio parahaemolyticus FORC_018 APE84845.1     29
 FORC22_0667   Vibrio parahaemolyticus FORC_022 APC86528.1     29
 FORC23_2179   Vibrio parahaemolyticus FORC_023 AOV90722.1     29
 CO725_09965 (TreC)   Vibrio parahaemolyticus HA2 ATI45995.1     29
 YA91_21420 (TreC)   Vibrio parahaemolyticus MAVP-26 ASZ52937.1     29
 AB831_12325   Vibrio parahaemolyticus MAVP-Q ANQ56904.1
ASO16834.1
    29
 CHR23_011685 (TreC)   Vibrio parahaemolyticus MAVP-R ASQ36455.1     29
 M636_18285   Vibrio parahaemolyticus O1:K33 str. CDC_K4557 AGQ99014.1     29
 M634_05470   Vibrio parahaemolyticus O1:Kuk str. FDA_R31 AGQ90303.1     29
 VP0711   Vibrio parahaemolyticus RIMD 2210633 O3:K6 BAC58974.1
CBF78987.1
NP_797090.1
    29
 VPUCM_2511   Vibrio parahaemolyticus UCM-V493 AHJ00470.1     29
 CCZ37_03815 (TreC)   Vibrio sp. Q67 ASU21771.1     29
 BSZ04_19955   Vibrio rotiferianus B64D1 ASI97167.1     29
 VSVS05_02095 (TreS)   Vibrio scophthalmi VS-05 ANU37199.1     29
 BSZ05_10080   Vibrio shilonii QT6D1 ASI90105.1     29
 CEQ48_14360 (TreC)   Vibrio sp. 2521-89 ASK55904.1     29
 VEJY3_03275   Vibrio sp. EJY3 AEX21153.1     29
 VS_2377   Vibrio tasmaniensis LGP32 CAV19537.1 B7VIU1   29
 IX91_11710   Vibrio tubiashii ATCC 19109 AIW14838.1     29
 VV93_v1c08330   Vibrio vulnificus 93U204 AIL69927.1     29
 AL549_08630   Vibrio vulnificus ATL 6-1306 AMG11433.1     29
 VVCECT4999_11870   Vibrio vulnificus CECT 4999 ASJ39351.1     29
 VV10288   Vibrio vulnificus CMCP6 AAO08821.1
CBF78978.1
NP_759294.1
    29
 FORC9_2142   Vibrio vulnificus FORC_009 ALM71659.1     29
 FORC16_0657   Vibrio vulnificus FORC_016 ANH62540.1     29
 FORC17_2291   Vibrio vulnificus FORC_017 ANN27354.1     29
 FORC36_0664   Vibrio vulnificus FORC_036 ARN65181.1     29
 FORC37_0626   Vibrio vulnificus FORC_037 ASC56320.1     29
 VVM_03908   Vibrio vulnificus MO6-24/O ADV87348.1     29
 AOT11_10585   Vibrio vulnificus NBRC 15645 = ATCC 27562 ASM95681.1     29
 VV0896   Vibrio vulnificus YJ016 BAC93660.1
NP_933689.1
Q7MN21   29
 BME96_02185   Virgibacillus halodenitrificans PDB-F2 APC47073.1     29
 CFK40_20055 (TreC)   Virgibacillus necropolis LMG 19488 ASN07129.1     29
 BKP57_13725   Virgibacillus sp. 6R API92773.1     29
 WSWS_00547 (TreC)   Weissella soli KACC 11848 AOT56184.1     29
 WSWS_00547 (TreC)   Weissella soli KACC 11848 AOT56184.1     29
 XBW1_0126 (TreC)   Xenorhabdus bovienii CS03 CDM87485.1     29
 XBJ1_0097 (TreC)   Xenorhabdus bovienii SS-2004 CBJ79248.1 D3UY70   29
 XDD1_0104 (TreC)   Xenorhabdus doucetiae FRM16 CDG15815.1     29
 A9255_15670   Xenorhabdus hominickii ANU1 AOM41868.1     29
 XNC2_4429 (TreC)   Xenorhabdus nematophila AN6/1 CEK25416.1     29
 XNC1_4588 (TreC)   Xenorhabdus nematophila ATCC 19061 CBJ92610.1 D3VFU4   29
 XPG1_0116 (TreC)   Xenorhabdus poinarii G6 CDG19771.1     29
 AT01_2053 (TreC)   Yersinia aldovae 670-83 AJJ61497.1     29
 ACZ76_06735   Yersinia aleksiciae 159 AKP33257.1     29
 YE5303_01921 (OlgH)   Yersinia enterocolitica (type O:5) str. YE53/03 CCQ38902.1     29
 CH48_2142 (TreC)   Yersinia enterocolitica 2516-87 AJJ25821.1     29
 CH49_3227 (TreC)   Yersinia enterocolitica 8081 AJJ25220.1     29
 LI89_19450   Yersinia enterocolitica FORC-002 ALG46814.1     29
 FORC2_0437   Yersinia enterocolitica FORC_002 AKF36584.1     29
 XM56_02170   Yersinia enterocolitica KNG22703 ALG77297.1     29
 LC20_00632 (TreC)   Yersinia enterocolitica LC20 AHM71888.1     29
 YE3773   Yersinia enterocolitica subsp. enterocolitica 8081 CAL13797.1 A1JRE4   29
 YE105_C3480   Yersinia enterocolitica subsp. palearctica 105.5R(r) ADZ43974.1     29
 Y11_03100   Yersinia enterocolitica subsp. palearctica Y11 CBY25517.1     29
 YEW_GE26180 (TreC)   Yersinia enterocolitica W22703 CBX72920.1     29
 CH47_4020 (TreC)   Yersinia enterocolitica WA AJI84124.1     29
 BFS78_02410   Yersinia enterocolitica YE1 AOF33990.1     29
 BB936_03115   Yersinia enterocolitica YE165 AOF13625.1     29
 BED35_03340   Yersinia enterocolitica YE3 AOF30069.1     29
 BED32_02865   Yersinia enterocolitica YE5 AOF25958.1     29
 BED33_05555   Yersinia enterocolitica YE6 AOF22248.1     29
 BED34_02890   Yersinia enterocolitica YE7 AOF17714.1     29
 PL78_10570   Yersinia entomophaga MH96 ANI30266.1     29
 CRN74_16895 (TreC)   Yersinia frederiksenii FDAARGOS_417 ATM87608.1     29
 CRN75_02065 (TreC)   Yersinia frederiksenii FDAARGOS_418 ATM94287.1     29
 AW19_2786 (TreC)   Yersinia frederiksenii Y225 AJI86590.1     29
 CH53_2234 (TreC)   Yersinia intermedia Y228 AJJ20424.1     29
 DJ57_3819 (TreC)   Yersinia kristensenii ATCC 33639 AIN16578.1     29
 CH54_3002 (TreC)   Yersinia kristensenii Y231 AJJ36423.1     29
 M486_1295 (TreC)   Yersinia pestis 1045 AKT00169.1     29
 M479_2471 (TreC)   Yersinia pestis 1412 AKS56437.1     29
 M480_2748 (TreC)   Yersinia pestis 1413 AKS76703.1     29
 M481_3802 (TreC)   Yersinia pestis 1522 AKS79479.1     29
 M478_2940 (TreC)   Yersinia pestis 2944 AKS62661.1     29
 M482_2024 (TreC)   Yersinia pestis 3067 AKS98282.1     29
 M483_2134 (TreC)   Yersinia pestis 3770 AKS91891.1     29
 M477_3679 (TreC)   Yersinia pestis 790 AKS83803.1     29
 M484_2037 (TreC)   Yersinia pestis 8787 AKS89939.1     29
 A1122_07910   Yersinia pestis A1122 AEL72235.1
AJJ76993.1
    29
 YpAngola_A1164   Yersinia pestis Angola ABX88156.1
AJJ84440.1
A9R1U8   29
 YPA_3709   Yersinia pestis Antiqua ABG15671.1
AJJ80241.1
Q1C1K1   29
 YPC_4308 (TreC)   Yersinia pestis biovar Medievalis str. Harbin 35 ADW00708.1     29
 YP3848 (TreC)   Yersinia pestis biovar Microtus str. 91001 AAS63994.1
NP_995117.1
    29
 BAY22_16845   Yersinia pestis Cadman ANW15513.1     29
 YPO3696   Yersinia pestis CO92 CAC93164.1
CAL22283.1
NP_407148.1
Q8ZAU0   29
 AK38_3039 (TreC)   Yersinia pestis CO92 AJJ88347.1     29
 YPD4_3167 (TreC)   Yersinia pestis D106004 ACY60071.1 D0JI59   29
 YPD8_3159 (TreC)   Yersinia pestis D182038 ACY63829.1 D0JSM1   29
 CH61_547 (TreC)   Yersinia pestis Dodson AJJ33525.1     29
 CH46_1491 (TreC)   Yersinia pestis El Dorado AJJ15342.1     29
 CH55_2505 (TreC)   Yersinia pestis Harbin35 AJK07641.1     29
 CH62_997 (TreC)   Yersinia pestis Java9 AJJ41312.1     29
 trehalase-6-P hydrolase (TreC;y0167)   Yersinia pestis KIM10+ AAM83761.1
CAZ78730.1
CBF78958.1
NP_667510.1
    29
 CH44_1176 (TreC)   Yersinia pestis KIM5 AKB88140.1     29
 CH45_3070 (TreC)   Yersinia pestis Nairobi AJK20849.1     29
 YPN_3476   Yersinia pestis Nepal516 ABG19803.1 Q1CDX7   29
 CH63_2323 (TreC)   Yersinia pestis Nicholisk 41 AJJ44650.1     29
 CH59_2452 (TreC)   Yersinia pestis PBM19 AJI90920.1     29
 YPDSF_0303   Yersinia pestis Pestoides F ABP38722.1
AJI99512.1
A4THG0   29
 CH43_1611 (TreC)   Yersinia pestis Pestoides G AJK25230.1     29
 BZ15_4140 (TreC)   Yersinia pestis Shasta AJJ49583.1     29
 CH60_3488 (TreC)   Yersinia pestis str. Pestoides B AJK10945.1     29
 YPZ3_3178 (TreC)   Yersinia pestis Z176003 ADE66087.1 D5B3U6   29
 BZ23_3133 (TreC)   Yersinia pseudotuberculosis 1 AJJ73179.1     29
 DJ40_2881 (TreC)   Yersinia pseudotuberculosis ATCC 6904 AIN16306.1     29
 BZ20_2579 (TreC)   Yersinia pseudotuberculosis EP2/+ AJJ06796.1     29
 YpsIP31758_0430   Yersinia pseudotuberculosis IP 31758 ABS49430.1 A7FDU5   29
 YPTB3537 (TreC)   Yersinia pseudotuberculosis IP 32953 CAH22775.1     29
 BZ17_3064 (TreC)   Yersinia pseudotuberculosis IP 32953 AJJ53279.1     29
 BZ21_2863 (TreC)   Yersinia pseudotuberculosis MD67 AJJ01867.1     29
 YPTS_3723   Yersinia pseudotuberculosis PB1/+ ACC90676.1
AJJ66611.1
B2K427   29
 BZ19_2996 (TreC)   Yersinia pseudotuberculosis str. PA3606 AJK17835.1     29
 YPK_0494   Yersinia pseudotuberculosis YPIII ACA66797.1
AJJ57672.1
B1JKJ2   29
 CH64_2203 (TreC)   Yersinia rohdei YRA AJJ11849.1     29
 UGYR_08155   Yersinia ruckeri Big Creek 74 AKA38372.1     29
 CSF007_16005   Yersinia ruckeri CSF007-82 CEK28923.1     29
 QMA0440_00386 (TreC)   Yersinia ruckeri QMA0440 ARY99754.1     29
 BD65_1524 (TreC)   Yersinia ruckeri YRB AJI96075.1     29
 BF17_05265   Yersinia similis CCUG 52882 AHK18807.1     29
 A6J67_00970   Yersinia sp. FDAARGOS_228 ARB82804.1     29
 AN401_04735   Zobellella denitrificans F13-1 ATG73252.1     29
unclassified
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 MMSYN1_0674   synthetic Mycoplasma mycoides JCVI-syn1.0 ADH22219.1     29
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