Glycoside Hydrolase Family 13 / Subf 28

Activities in Sub Family[retaining] α-amylase (EC 3.2.1.1);
Mechanism Retaining a
ClanGH-H
3D Structure Status( β / α ) 8 barrel
Catalytic Nucleophile/BaseAsp (experimental)
Catalytic Proton DonorGlu (experimental)
NoteNew: many members have been assigned to subfamilies as described by Stam et al. (2006) Protein Eng Des Sel. 19, 555-562 (PMID: 17085431)
External resourcesCAZypedia; EBI Protein of the Month; HOMSTRAD; PDB Molecule of the Month; PRINTS;
Commercial Enzyme Provider(s)MEGAZYME; PROZOMIX;
Statistics GenBank accession (27); Uniprot accession (27); PDB accession (3); 3D entries (2); cryst (0)
Eukaryota
Protein Name EC#Organism GenBankUniprotPDB/3DSubf
 276023   Anaeromyces robustus v1.0 (Anasp1)       28
 330457   Anaeromyces robustus v1.0 (Anasp1)       28
 271209   Anaeromyces robustus v1.0 (Anasp1)       28
 272786   Anaeromyces robustus v1.0 (Anasp1)       28
 272784   Anaeromyces robustus v1.0 (Anasp1)       28
 446159   Caecomyces churrovis (Caecom1)       28
 449553   Caecomyces churrovis (Caecom1)       28
 127826   Caecomyces churrovis (Caecom1)       28
 706766   Neocallimastix californiae v1.0 (Neosp1)       28
 675979   Neocallimastix californiae v1.0 (Neosp1)       28
 667410   Neocallimastix californiae v1.0 (Neosp1)       28
 708430   Neocallimastix californiae v1.0 (Neosp1)       28
 1685944   Neocallimastix lanati v1.0 (Neolan1)       28
 1714985   Neocallimastix lanati v1.0 (Neolan1)       28
 1044074   Neocallimastix lanati v1.0 (Neolan1)       28
 990092   Neocallimastix lanati v1.0 (Neolan1)       28
 α-amylase (fragment)   Orpinomyces cf. joyonii D3B AWA81566.1     28
 1177511   Orpinomyces sp. (Orpsp1_1)       28
 1180018   Orpinomyces sp. (Orpsp1_1)       28
 1179558   Orpinomyces sp. (Orpsp1_1)       28
 1190292   Orpinomyces sp. (Orpsp1_1)       28
 1187619   Orpinomyces sp. (Orpsp1_1)       28
 1177217   Orpinomyces sp. (Orpsp1_1)       28
 1188063   Orpinomyces sp. (Orpsp1_1)       28
 1189279   Orpinomyces sp. (Orpsp1_1)       28
 4597   Piromyces sp. E2 (PirE2_1)       28
 14006   Piromyces sp. E2 (PirE2_1)       28
 3430   Piromyces sp. E2 (PirE2_1)       28
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