Glycoside Hydrolase Family 123

Activities in Familyβ-N-acetylgalactosaminidase (EC 3.2.1.53); glycosphingolipid β-N-acetylgalactosaminidase (EC 3.2.1.-)
Mechanism Retaining
Catalytic Nucleophile/Basecarbonyl oxygen of C-2 acetamido group of substrate
Catalytic Proton DonorGlu
NoteCreated after Sumida T, Fujimoto K, Ito M. (2011) J Biol Chem. 286:14065-14072 [PMID: 21297160]
External resourcesCAZypedia;
Statistics GenBank accession (172); Uniprot accession (2); PDB accession (8); 3D entries (2); cryst (0)
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 ATC03_02805   Agromyces aureus AR33 ANJ25838.1    
 PYTT_2120   Akkermansia glycaniphila SEH96230.1    
 Amuc_0803   Akkermansia muciniphila ATCC BAA-835 ACD04636.1 B2UQA1  
 A4V05_11605   Akkermansia muciniphila YL44 ANU62025.1
ASB35516.1
   
 Alfi_1587   Alistipes finegoldii DSM 17242 AFL77927.1    
 AL1_30440 (fragment)   Alistipes shahii WAL 8301 CBK65139.1    
 CGC64_01960   Bacteroides caccae ATCC 43185 ASM64853.1    
 CGC64_09405   Bacteroides caccae ATCC 43185 ASM66148.1    
 ABI39_10785   Bacteroides dorei CL03T12C01 AND19822.1    
 EL88_03595   Bacteroides dorei isolate HS1_L1_B_010 AII62305.1    
 GV66_11170   Bacteroides dorei isolate HS1_L3_B_079 AII68232.1    
 IY41_11415   Bacteroides dorei isolate HS2_L_2_B_045b ALA73996.1    
 BF638R_4070   Bacteroides fragilis 638R CBW24512.1    
 MB0529_03960   Bacteroides fragilis BE1 CUA20545.1    
 VU15_19425   Bacteroides fragilis BOB25 AKA53644.1    
 BF4033   Bacteroides fragilis NCTC 9343 CAH09708.1    
 AE940_15680   Bacteroides fragilis S14 ANQ63070.1    
 BF4209   Bacteroides fragilis YCH46 BAD50952.1    
 Bache_2466   Bacteroides helcogenes P 36-108 ADV44431.1    
 Bache_0774   Bacteroides helcogenes P 36-108 ADV42795.1    
 Bovatus_02818   Bacteroides ovatus ATCC 8483 ALJ47431.1    
 BACOV975_00583 (fragment)   Bacteroides ovatus V975 SCV06834.1    
 Btheta7330_00327   Bacteroides thetaiotaomicron 7330 ALJ39923.1    
 BT2751   Bacteroides thetaiotaomicron VPI-5482 AAO77857.1    
 N-acetyl-β-galactosaminidase / β-N-acetylgalactosaminidase (BvGH123;BVU_2198) 3.2.1.53 Bacteroides vulgatus ATCC 8482 ABR39859.1   5L7R[A,B]
5L7U[A,B]
5L7V[A,B]
 BvMPK_1815   Bacteroides vulgatus mpk ALK84417.1    
 BXY_18760   Bacteroides xylanisolvens XB1A CBK66974.1    
 BBBF_1585   Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456 BAQ98792.1    
 RY70_1745   Bifidobacterium bifidum BF3 ALE12069.1    
 BBB_1574   Bifidobacterium bifidum BGN4 AFL05165.1    
 BBJK_00867   Bifidobacterium bifidum LMG 13195 JCM 7004 BBA47625.1    
 BBNG_01507   Bifidobacterium bifidum NCIMB 41171 EFR50959.1    
 BBPR_1596   Bifidobacterium bifidum PRL2010 ADP36622.1    
 BBIF_1538   Bifidobacterium bifidum S17 ADO53743.1    
 BBTM_01414   Bifidobacterium bifidum TMC 3115 BBA55846.1    
 CGC47_03365   Capnocytophaga canimorsus 7120 ATA76693.1    
 Ccan_15720   Capnocytophaga canimorsus Cc5 AEK23688.1    
 CGC54_03210   Capnocytophaga canimorsus H3936 ATA93415.1    
 CGC56_03465   Capnocytophaga canimorsus H5594 ATA91306.1    
 CGC48_03055   Capnocytophaga cynodegmi G7591 ATA67699.1    
 CGC52_09795   Capnocytophaga sp. H2931 ATA75689.1    
 CGC49_09875   Capnocytophaga sp. H4358 ATA73561.1    
 CGC58_09515   Capnocytophaga stomatis H2177 ATA89940.1    
 CK934_29110   Chitinophaga sp. MD30 ASZ14718.1    
 COR50_08865   Chitinophagaceae bacterium 13 ATL47273.1    
 BN1096_520151   Clostridioides difficile CDS85200.1    
 TW87_15905   Clostridioides difficile 08ACD0030 AMM57898.1    
 CDIF630_02799   Clostridioides difficile 630 AJP12294.1    
 CDIF630erm_02799   Clostridioides difficile 630 delta erm ARE63473.1    
 CD630DERM_25470   Clostridioides difficile 630Derm CEJ99170.1    
 BN1095_620119   Clostridioides difficile 7032989 CDT65557.1    
 BN1097_680033   Clostridioides difficile 7032994 CDS88446.1    
 CDIF1296T_02674   Clostridioides difficile ATCC 9689 = DSM 1296 AKP43507.1    
 BZ168_05210   Clostridioides difficile BR81 AQU09053.1    
 CGC51_13190   Clostridioides difficile DH/NAP11/106/ST-42 ASN90243.1    
 ERS445050_02542   Clostridioides difficile NCTC13307 CKH36318.1    
 PCZ31_1912   Clostridioides difficile Z31 ALP03839.1    
 BTM20_05965   Clostridium chauvoei 12S0467 ATD56204.1    
 BTM21_07090   Clostridium chauvoei DSM 7528 ATD58699.1    
 CCH01_10640   Clostridium chauvoei JF4335 SLK16527.1    
 glycolipid exo-β-N-acetylgalactosaminidase (CpNga123;CPF_1473) 3.2.1.53
3.2.1.-
Clostridium perfringens ATCC 13124 ABG82546.1   5FQE[A,B]
5FQF[A,B]
5FQG[A]
5FQH[A]
5FR0[A]
 BXT91_07895   Clostridium perfringens CP15 AQW23841.1    
 BXT94_08730   Clostridium perfringens Del1 AQW26847.1    
 BG908_07655   Clostridium perfringens EHE-NE18 ASY51538.1    
 FORC3_1451   Clostridium perfringens FORC_003 ALG48828.1    
 FORC25_1621   Clostridium perfringens FORC_025 AOY54035.1    
 JFP55_07800   Clostridium perfringens JP55 AMN32810.1    
 JFP838_08530   Clostridium perfringens JP838 AMN35791.1    
 CMR01_07365   Clostridium perfringens LLY_N11 ATD48594.1    
 CPR_1271   Clostridium perfringens SM101 ABG87185.1    
 Cpe1265   Clostridium perfringens str. 13 BAB80971.1    
 COCOR_00091   Corallococcus coralloides DSM 2259 AFE03265.1    
 BBD28_02285   Elizabethkingia anophelis 0422 AQW89557.1    
 BBD31_12820   Elizabethkingia anophelis 3375 AQW98716.1    
 EAAG1_017490   Elizabethkingia anophelis Ag1 ATC41563.1    
 CMV40_17490   Elizabethkingia anophelis AR4-6 ATC48917.1    
 CMV41_17490   Elizabethkingia anophelis AR6-8 ATC45241.1    
 A2T72_00850   Elizabethkingia anophelis CSID_3000521207 AMX50085.1    
 A2T74_00850   Elizabethkingia anophelis CSID_3015183678 AMR39988.1    
 A2T59_00850   Elizabethkingia anophelis CSID_3015183681 AMX53475.1    
 A4C56_00850   Elizabethkingia anophelis CSID_3015183684 AMX46624.1    
 AYC66_09965   Elizabethkingia anophelis E6809 AQX50979.1    
 AYC67_09640   Elizabethkingia anophelis F3543 AQX89265.1    
 A6J37_08185   Elizabethkingia anophelis FDAARGOS_198 ASV78595.1    
 M876_04350   Elizabethkingia anophelis FMS-007 AKH93797.1    
 BD94_1203   Elizabethkingia anophelis NUHP1 AIL44978.1    
 BAZ09_017275   Elizabethkingia anophelis R26 ATC37884.1    
 BBD32_13745   Elizabethkingia endophytica F3201 AQX02442.1    
 BBD30_00510   Elizabethkingia endophytica JM-87 AQW92788.1    
 AYC65_11265   Elizabethkingia genomosp. 3 str. G0146 AQX85553.1    
 BBD34_15385   Elizabethkingia genomosp. 4 str. G4123 AQX09925.1    
 BBD33_07140   Elizabethkingia meningoseptica G4076 AQX05034.1    
 BBD35_08965   Elizabethkingia meningoseptica G4120 AQX12492.1    
 B5G46_07130   Elizabethkingia meningoseptica KC1913 AQX47077.1    
 VO54_01327   Elizabethkingia miricola BM10 AJW62809.1    
 CQS02_00800   Elizabethkingia miricola EM798-26 ATL41941.1    
 neuraminidase   Enterococcus durans KLDS 6.0930 AKZ47736.1    
 neuraminidase   Enterococcus durans KLDS6.0933 AKX86369.1    
 EFE1002_892   Enterococcus faecium CUX98370.1    
 M395_04975   Enterococcus faecium T110 AII40406.1    
 neuraminidase   Enterococcus gallinarum FDAARGOS_163 AMG51098.1    
 EHR_10965   Enterococcus hirae ATCC 9790 AFM71078.1    
 neuraminidase   Enterococcus hirae FDAARGOS_234 ASV82167.1    
 neuraminidase   Enterococcus hirae R17 AND72633.1    
 ING2E5B_2215   Fermentimonas caenicola CEA16943.1    
 FMG_0256   Finegoldia magna ATCC 29328 BAG07674.1    
 SAMN04515669_1347   Jiangella sp. DSM 45060 SDS55045.1    
 ORF   Kibdelosporangium sp. MJ126-NF4 CTQ90302.1    
 Lbys_2826   Leadbetterella byssophila DSM 17132 ADQ18488.1    
 AMK43_02935   Leptotrichia sp. oral taxon 212 W10393 ALA96594.1    
 Mahau_1822   Mahella australiensis 50-1 BON AEE96999.1    
 GA0070607_4873   Micromonospora coriariae DSM 44875 SCF04955.1    
 ADH68_07890   Muribaculum intestinale YL27 ASB37921.1    
 A8C56_20470   Niabella ginsenosidivorans BS26 ANH83042.1    
 A8C56_13435   Niabella ginsenosidivorans BS26 ANH81845.1    
 A8C56_09090   Niabella ginsenosidivorans BS26 ANH81113.1    
 NIASO_03785   Niabella soli DSM 19437 AHF14546.1    
 SAMN05444162_0584   Paenibacillaceae bacterium GAS479 SDS03101.1    
 H70737_06655   Paenibacillus sp. FSL H7-0737 AIQ22560.1    
 CIC07_23010   Paenibacillus sp. RUD330 ASS68683.1    
 glycosphingolipid β-N-acetylgalactosaminidase (NgaP) 3.2.1.53
3.2.1.-
Paenibacillus sp. TS12 BAJ83606.1    
 SAMN05661091_2255   Paenibacillus uliginis N3/975 SMF82867.1    
 ATCC9714_17081   Paeniclostridium sordellii ATCC 9714 CEJ73820.1    
 JGS6382_16271   Paeniclostridium sordellii JGS6382 CEK38295.1    
 BDI_2427   Parabacteroides distasonis ATCC 8503 ABR44152.1    
 BDI_1684   Parabacteroides distasonis ATCC 8503 ABR43436.1    
 CI960_18365   Parabacteroides sp. CT06 AST55174.1    
 CI960_06210   Parabacteroides sp. CT06 AST52966.1    
 A4V02_09810   Parabacteroides sp. YL27 ANU63982.1    
 neuraminidase   Pediococcus acidilactici BCC1 APR28146.1    
 S100313_00660   Pediococcus acidilactici SRCM100313 ARW26098.1    
 S100424_00636   Pediococcus acidilactici SRCM100424 ARW24075.1    
 neuraminidase   Pediococcus acidilactici ZPA017 AOW73491.1    
 PEPE_1597   Pediococcus pentosaceus ATCC 25745 ABJ68618.1    
 Phep_4116   Pedobacter heparinus DSM 2366 ACU06307.1    
 AQ505_15860   Pedobacter sp. PACM 27299 ALL08835.1    
 EAL2_808p03990   Peptoclostridium acidaminophilum DSM 3953 AHM57903.1    
 ING2E5A_1962   Petrimonas mucosa DSM 28695 SCM58775.1    
 ING2E5A_0327   Petrimonas mucosa DSM 28695 SCM55400.1    
 ING2E5A_2901   Petrimonas mucosa DSM 28695 SCM59696.1    
 ING2E5A_1959   Petrimonas mucosa DSM 28695 SCM58768.1    
 ING2E5A_1938   Petrimonas mucosa DSM 28695 SCM58723.1    
 PEIBARAKI_2959   Petrimonas sp. IBARAKI BBA16832.1    
 PEIBARAKI_1983   Petrimonas sp. IBARAKI BBA15856.1    
 SMSP2_01471   Phycisphaerae bacterium SM-Chi-D1 AQQ71106.1    
 SMSP2_01476   Phycisphaerae bacterium SM-Chi-D1 AQQ71111.1    
 SMSP2_01480   Phycisphaerae bacterium SM-Chi-D1 AQQ71115.1    
 SMSP2_01484   Phycisphaerae bacterium SM-Chi-D1 AQQ71119.1    
 STSP2_02272 (fragment)   Phycisphaerae bacterium ST-NAGAB-D1 AQT69086.1    
 ADJ77_07955 (fragment)   Prevotella fusca JCM 17724 AKU69798.1    
 HMPREF0659_A6974 (fragment)   Prevotella melaninogenica ATCC 25845 ADK97334.1    
 CEP85_12070 (fragment)   Prevotella melaninogenica FDAARGOS_306 ASE18818.1    
 PMEL_200068 (fragment)   Prevotella melaninogenica GAI 07411 BBA29555.1    
 PSM36_0080   Proteiniphilum saccharofermentans SCD18916.1    
 PSM36_0080   Proteiniphilum saccharofermentans SCD18916.1    
 AO058_09840   Salegentibacter sp. T436 APS40771.1    
 CA265_14220   Sphingobacteriaceae bacterium GW460-11-11-14-LB5 ARS40749.1    
 SAMEA4412673_02742   Sphingobacterium mizutaii NCTC12149 SNV52841.1    
 Sph21_1440   Sphingobacterium sp. 21 ADZ78002.1    
 BV902_11285   Sphingobacterium sp. B29 APU96856.1    
 KO02_20870   Sphingobacterium sp. ML3W AIM38882.1    
 KO02_11250   Sphingobacterium sp. ML3W AIM37202.1    
 BN1088_1500041   Sphingobacterium sp. PM2-P1-29 CDT16212.1    
 SBI_02691   Streptomyces bingchenggensis BCW-1 ADI05812.1    
 M271_12215   Streptomyces rapamycinicus NRRL 5491 AGP54039.1    
 BFO_0590   Tannerella forsythia 92A2 ATCC 43037 AEW22295.1    
 TFKS16_0352   Tannerella forsythia KS16 BAR50673.1    
 THTE_2697   Thermogutta terrifontis R1 ASV75299.1    
 NanP   Trueperella pyogenes AAK98800.1 Q8VPE8  
 neuraminidase (NanP) (fragment)   Trueperella pyogenes FL-1 ARA90381.1    
 X956_00875 (fragment)   Trueperella pyogenes TP8 AJC68877.1    
 ORF (fragment)   uncultured bacterium APO33248.1    
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