Activities in Family | Xylan endotransglycosylase (EC 2.4.2.-); [retaining] arabinoxylan-specific endo-β-1,4-xylanase (EC 3.2.1.-); Mixed-linkage xylan-specific endo-β-1,4-xylanase (cleaves glycosidic bond after β-1,3-linkage) (EC 3.2.1.-); Mixed-linkage xylan-specific endo-β-1,4-xylanase (cleaves glycosidic bond preceding β-1,3-linkage) (EC 3.2.1.-); Tomatinase β-galactosidase (EC 3.2.1.-); [inverting] oligosaccharide reducing-end xylanase (EC 3.2.1.156); Endo-β-1,3-xylanase (EC 3.2.1.32); Xylan β-1,4-xylosidase (EC 3.2.1.37); Endo-β-1,4-glucanase (EC 3.2.1.4); Endo-β-1,4-xylanase (EC 3.2.1.8);
|
Mechanism | Retaining e |
Clan | GH-A |
3D Structure Status | ( β / α ) 8 barrel |
Catalytic Nucleophile/Base | Glu (experimental) |
Catalytic Proton Donor | Glu (experimental) |
Note | formerly known as cellulase family F. |
External resources | CAZypedia; HOMSTRAD; PRINTS; PROSITE; |
Commercial Enzyme Provider(s) | MEGAZYME; NZYTech; PROZOMIX; |
Statistics | GenBank accession (9057); Uniprot accession (385); PDB accession (222); 3D entries (61); cryst (2) |
| | ... | | | | | 19 | | | | | ... | | |
Bacteria |
Protein Name | EC# | Organism | GenBank |
Uniprot | PDB/3D | |
endo-1,4-β-glycosidase, partial (TomA) (fragment) |
|
Clavibacter michiganensis subsp. michiganensis 13134
|
AHZ96399.1 |
|
|
|
DQP62_04955 |
|
Clavibacter michiganensis subsp. michiganensis A4758
|
UQZ29904.1 |
|
|
|
DQP62_12340 |
|
Clavibacter michiganensis subsp. michiganensis A4758
|
UQZ31248.1 |
|
|
|
DQP62_12345 |
|
Clavibacter michiganensis subsp. michiganensis A4758
|
UQZ31249.1 |
|
|
|
DQP53_08755 |
|
Clavibacter michiganensis subsp. michiganensis A5747*
|
UQZ79330.1 |
|
|
|
DQP53_01335 |
|
Clavibacter michiganensis subsp. michiganensis A5747*
|
UQZ78008.1 |
|
|
|
LHJ48_08800 |
|
Clavibacter michiganensis subsp. michiganensis CMM09
|
UDM12515.1 |
|
|
|
LHJ48_00630 |
|
Clavibacter michiganensis subsp. michiganensis CMM09
|
UDM13886.1 |
|
|
|
LHJ48_08795 |
|
Clavibacter michiganensis subsp. michiganensis CMM09
|
UDM12514.1 |
|
|
|
LHJ47_08805 |
|
Clavibacter michiganensis subsp. michiganensis CMM39
|
UDM19197.1 |
|
|
|
LHJ47_00630 |
|
Clavibacter michiganensis subsp. michiganensis CMM39
|
UDM20566.1 |
|
|
|
LHJ47_08810 |
|
Clavibacter michiganensis subsp. michiganensis CMM39
|
UDM19198.1 |
|
|
|
PSI72_00600 |
|
Clavibacter michiganensis subsp. michiganensis CMM39
|
WDD25459.1 |
|
|
|
PSI72_08795 |
|
Clavibacter michiganensis subsp. michiganensis CMM39
|
WDD24088.1 |
|
|
|
PSI72_08790 |
|
Clavibacter michiganensis subsp. michiganensis CMM39
|
WDD24087.1 |
|
|
|
LHJ49_08795 |
|
Clavibacter michiganensis subsp. michiganensis CMM84
|
UDM09398.1 |
|
|
|
LHJ49_00625 |
|
Clavibacter michiganensis subsp. michiganensis CMM84
|
UDM10765.1 |
|
|
|
LHJ49_08800 |
|
Clavibacter michiganensis subsp. michiganensis CMM84
|
UDM09399.1 |
|
|
|
PSS89_08785 |
|
Clavibacter michiganensis subsp. michiganensis Cmm_21
|
WDD27197.1 |
|
|
|
PSS89_00605 |
|
Clavibacter michiganensis subsp. michiganensis Cmm_21
|
WDD28570.1 |
|
|
|
PSS89_08790 |
|
Clavibacter michiganensis subsp. michiganensis Cmm_21
|
WDD27198.1 |
|
|
|
GRD74_08815 |
|
Clavibacter michiganensis subsp. michiganensis MSF322
|
QIT11558.1 |
|
|
|
GRD74_00595 |
|
Clavibacter michiganensis subsp. michiganensis MSF322
|
QIT10082.1 QYU76427.1 |
|
|
|
GRD74_08820 |
|
Clavibacter michiganensis subsp. michiganensis MSF322
|
QIT11559.1 |
|
|
|
MU580_00625 |
|
Clavibacter michiganensis subsp. michiganensis N.P.
|
UOW03809.1 |
|
|
|
MU580_08955 |
|
Clavibacter michiganensis subsp. michiganensis N.P.
|
UOW02412.1 |
|
|
|
MU580_08950 |
|
Clavibacter michiganensis subsp. michiganensis N.P.
|
UOW02411.1 |
|
|
|
tomatinase (TomA; CMM_0090) |
|
Clavibacter michiganensis subsp. michiganensis NCPPB 382
|
AAP57293.1 CAN00109.1 |
|
|
|
CMM_1673 (XysA) |
|
Clavibacter michiganensis subsp. michiganensis NCPPB 382
|
CAN01725.1 |
|
|
|
CMM_1674 (XysB) |
|
Clavibacter michiganensis subsp. michiganensis NCPPB 382
|
CAN01726.1 |
|
|
|
tomatinase, partial (fragment) |
|
Clavibacter michiganensis subsp. michiganensis OP3
|
QYU76432.1 |
|
|
|
tomatinase, partial (fragment) |
|
Clavibacter michiganensis subsp. michiganensis OP7
|
QYU76433.1 |
|
|
|
EFE39_08705 |
|
Clavibacter michiganensis subsp. michiganensis UF1
|
QGV75311.1 |
|
|
|
EFE39_08710 |
|
Clavibacter michiganensis subsp. michiganensis UF1
|
QGV75312.1 |
|
|
|
EFE39_00605 |
|
Clavibacter michiganensis subsp. michiganensis UF1
|
QGV73869.1 |
|
|
|
tomatinase, partial (fragment) |
|
Clavibacter michiganensis subsp. michiganensis VL368
|
QYU76428.1 |
|
|
|
GRD61_00605 |
|
Clavibacter michiganensis subsp. michiganensis VL527
|
QIT13206.1 |
|
|
|
GRD61_08925 |
|
Clavibacter michiganensis subsp. michiganensis VL527
|
QIT14712.1 |
|
|
|
tomatinase, partial (fragment) |
|
Clavibacter michiganensis subsp. michiganensis VL527
|
QYU76430.1 |
|
|
|
tomatinase, partial (fragment) |
|
Clavibacter michiganensis subsp. michiganensis VL542
|
QYU76431.1 |
|
|
|
KN218_08400 |
|
Clavibacter michiganensis subsp. michiganensis VQ143
|
QXP01620.1 |
|
|
|
tomatinase, partial (fragment) |
|
Clavibacter michiganensis subsp. michiganensis VQ143
|
QYU76426.1 |
|
|
|
KN200_08405 |
|
Clavibacter michiganensis subsp. michiganensis VQ28
|
QXP04634.1 |
|
|
|
KN200_15410 |
|
Clavibacter michiganensis subsp. michiganensis VQ28
|
QXP07523.1 |
|
|
|
tomatinase, partial (fragment) |
|
Clavibacter michiganensis subsp. michiganensis VQ28
|
QYU76425.1 |
|
|
|
tomatinase, partial (fragment) |
|
Clavibacter michiganensis subsp. michiganensis VQ519
|
QYU76429.1 |
|
|
|
FGG90_15295 |
|
Clavibacter michiganensis subsp. tessellarius ATCC 33566
|
UKF35211.1 |
|
|
|
FGG90_04500 |
|
Clavibacter michiganensis subsp. tessellarius ATCC 33566
|
UKF33319.1 |
|
|
|
FGG90_04495 |
|
Clavibacter michiganensis subsp. tessellarius ATCC 33566
|
UKF33318.1 |
|
|
|
LIX20_001670 |
|
Clavibacter nebraskensis 419B
|
UQB12356.1 |
|
|
|
LIX20_001669 |
|
Clavibacter nebraskensis 419B
|
UQB12355.1 |
|
|
|
LIX20_000783 |
|
Clavibacter nebraskensis 419B
|
UQB14205.1 |
|
|
|
LIX22_001668 |
|
Clavibacter nebraskensis 44
|
UQB15195.1 |
|
|
|
LIX22_001669 |
|
Clavibacter nebraskensis 44
|
UQB15196.1 |
|
|
|
LIX22_000782 |
|
Clavibacter nebraskensis 44
|
UQB17037.1 |
|
|
|
EGX35_08215 |
|
Clavibacter nebraskensis 61-1
|
QGV72396.1 |
|
|
|
EGX35_03880 |
|
Clavibacter nebraskensis 61-1
|
QGV71637.1 |
|
|
|
EGX35_08210 |
|
Clavibacter nebraskensis 61-1
|
QGV72395.1 |
|
|
|
EGX37_08215 |
|
Clavibacter nebraskensis 7580
|
QGV69606.1 |
|
|
|
EGX37_03880 |
|
Clavibacter nebraskensis 7580
|
QGV68847.1 |
|
|
|
EGX37_08210 |
|
Clavibacter nebraskensis 7580
|
QGV69605.1 |
|
|
|
FGQ65_05840 |
|
Clavibacter nebraskensis A6096
|
UKF27784.1 |
|
|
|
FGQ65_01420 |
|
Clavibacter nebraskensis A6096
|
UKF26996.1 |
|
|
|
FGQ65_01425 |
|
Clavibacter nebraskensis A6096
|
UKF26997.1 |
|
|
|
LIX19_000779 |
|
Clavibacter nebraskensis CIBA
|
UQB11357.1 |
|
|
|
LIX19_001649 |
|
Clavibacter nebraskensis CIBA
|
UQB09511.1 |
|
|
|
LIX19_001648 |
|
Clavibacter nebraskensis CIBA
|
UQB09510.1 |
|
|
|
LIV34_001646 |
|
Clavibacter nebraskensis CNK-2
|
UQB03859.1 |
|
|
|
LIV34_001647 |
|
Clavibacter nebraskensis CNK-2
|
UQB03860.1 |
|
|
|
LIV34_000777 |
|
Clavibacter nebraskensis CNK-2
|
UQB05702.1 |
|
|
|
EGX36_08225 |
|
Clavibacter nebraskensis HF4
|
QGV68103.1 |
|
|
|
EGX36_08230 |
|
Clavibacter nebraskensis HF4
|
QGV66806.1 |
|
|
|
EGX36_03890 |
|
Clavibacter nebraskensis HF4
|
QGV66049.1 |
|
|
|
CMN_00792 |
|
Clavibacter nebraskensis NCPPB 2581
|
CCE74749.1 |
|
|
|
CMN_01654 (XysA) |
|
Clavibacter nebraskensis NCPPB 2581
|
CCE75599.1 |
|
|
|
CMN_01655 (XysB) |
|
Clavibacter nebraskensis NCPPB 2581
|
CCE75600.1 |
|
|
|
LIX21_000777 |
|
Clavibacter nebraskensis SL1
|
UQB08526.1 |
|
|
|
LIX21_001646 |
|
Clavibacter nebraskensis SL1
|
UQB06684.1 |
|
|
|
LIX21_001647 |
|
Clavibacter nebraskensis SL1
|
UQB06685.1 |
|
|
|
FGI33_04785 |
|
Clavibacter phaseoli LPPA 982
|
UKF36440.1 |
|
|
|
FGI33_09185 |
|
Clavibacter phaseoli LPPA 982
|
UKF37245.1 |
|
|
|
CMS0087 |
|
Clavibacter sepedonicus ATCC 33113
|
CAQ00211.1 |
|
|
|
LRE50_00455 |
|
Clavibacter sepedonicus K496
|
UUK65764.1 |
|
|
|
KYT88_08675 |
|
Clavibacter sp. A6099
|
UKF23809.1 |
|
|
|
KYT88_08680 |
|
Clavibacter sp. A6099
|
UKF23810.1 |
|
|
|
KYT88_04250 |
|
Clavibacter sp. A6099
|
UKF25920.1 |
|
|
|
H9X71_08130 |
|
Clavibacter zhangzhiyongii DM1
|
QOD42619.1 |
|
|
|
H9X71_08125 |
|
Clavibacter zhangzhiyongii DM1
|
QOD42618.1 |
|
|
|
JS518_13830 |
|
Clostridiales bacterium FE2010
|
QTE73953.1 |
|
|
|
JS518_10235 |
|
Clostridiales bacterium FE2010
|
QTE73306.1 |
|
|
|
JS518_03135 |
|
Clostridiales bacterium FE2010
|
QTE74896.1 |
|
|
|
JS518_08330 |
|
Clostridiales bacterium FE2010
|
QTE72954.1 |
|
|
|
JRC49_14240 |
|
Clostridiales bacterium FE2011
|
QTE70924.1 |
|
|
|
JRC49_09380 |
|
Clostridiales bacterium FE2011
|
QTE70018.1 |
|
|
|
JRC49_03850 |
|
Clostridiales bacterium FE2011
|
QTE71970.1 |
|
|
|
JRC49_05745 |
|
Clostridiales bacterium FE2011
|
QTE72318.1 |
|
|
|
FRZ06_00445 |
|
Clostridiales bacterium MT110
|
QOX61929.1 |
|
|
|
FRZ06_00440 |
|
Clostridiales bacterium MT110
|
QOX61928.1 |
|
|
|
JYE49_01315 |
|
Clostridiales bacterium R-7
|
QUC67378.1 |
|
|
|
JYE49_06330 |
|
Clostridiales bacterium R-7
|
QUC68308.1 |
|
|
|
Top |