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Glycoside Hydrolase Family 104

Known Activitiespeptidoglycan lytic transglycosylase (EC 3.2.1.-)
Mechanism Retaining
NoteCorresponds to family 4 of the peptidoglycan lytic transglycosylases described by N.T. Blackburn and A.J. Clarke (2001) J. Mol. Evol. 52, 78-84
External resourcesCAZypedia;
Statistics GenBank accession (295); Uniprot accession (133); PDB accession (3); 3D entries (1); cryst (0)
Summary
All (278) Bacteria (228) Viruses (50) Structure (1 ) Characterized (5)
Bacteria
Protein Name EC#OrganismGenBankUniprotPDB/3D
 AM1_4119   Acaryochloris marina MBIC11017 ABW29100.1 B0CAN4  
 phage lysozyme   Acaryochloris sp. HICR111A AFM92600.1    
 C380_09855   Acidovorax sp. KKS102 AFU45671.1    
 ASA_1579   Aeromonas salmonicida subsp. salmonicida A449 ABO89664.1 A4SL92  
 ASA_3842   Aeromonas salmonicida subsp. salmonicida A449 ABO91797.1 A4SL92  
 ANA_C13758   Anabaena sp. 90 AFW96410.1    
 Anacy_0916   Anabaena cylindrica PCC 7122 AFZ56492.1    
 Ava_4318   Anabaena variabilis ATCC 29413 ABA23916.1 Q3M520  
 Ava_C0209   Anabaena variabilis ATCC 29413 ABA25294.1 Q3M149  
 NIES39_N00100   Arthrospira platensis NIES-39 BAI93127.1 D5A310  
 AZKH_4501   Azoarcus sp. KH32C BAL26774.1    
 AZC_3581   Azorhizobium caulinodans ORS 571 BAF89579.1 A8IF62  
 BEST7613_4767 (fragment)   Bacillus subtilis BEST7613 BAM53698.1    
 BEST7613_6168   Bacillus subtilis BEST7613 BAM55099.1    
 BDB_80280   blood disease bacterium R229 CCA79894.1    
 BDB_40247   blood disease bacterium R229 CCA79294.1    
 BDB_30214   blood disease bacterium R229 CCA82395.1    
 Bamb_1852 (probable fragment)   Burkholderia ambifaria AMMD ABI87408.1 Q0BEL5  
 BCAL2476c (probable fragment)   Burkholderia cenocepacia J2315 CAR52779.1 B4E744  
 BC1001_5906   Burkholderia sp. CCGE1001 ADX59270.1    
 BC1002_4841   Burkholderia sp. CCGE1002 ADG18805.1 D5WDK2  
 Bcep1808_1314   Burkholderia vietnamiensis G4 ABO54324.1 A4JDH1  
 Cal6303_2448   Calothrix sp. PCC 6303 AFZ01447.1    
 Cal6303_2552   Calothrix sp. PCC 6303 AFZ01534.1    
 Cal6303_3134   Calothrix sp. PCC 6303 AFZ02077.1    
 Cal7507_0975   Calothrix sp. PCC 7507 AFY31453.1    
 Cha6605_1952   Chamaesiphon minutus PCC 6605 AFY93059.1    
 Cha6605_5380   Chamaesiphon minutus PCC 6605 AFY96267.1    
 Chro_5038   Chroococcidiopsis thermalis PCC 7203 AFY90415.1    
 Chro_5650   Chroococcidiopsis thermalis PCC 7203 AFY91002.1    
 Chro_5702   Chroococcidiopsis thermalis PCC 7203 AFY91050.1    
 CtCNB1_2992   Comamonas testosteroni CNB-2 ACY33738.1 D0J149  
 Cri9333_0237   Crinalium epipsammum PCC 9333 AFZ11233.1    
 Cri9333_2674   Crinalium epipsammum PCC 9333 AFZ13531.1    
 Cri9333_2931   Crinalium epipsammum PCC 9333 AFZ13770.1    
 Cyan10605_2332   Cyanobacterium aponinum PCC 10605 AFZ54416.1    
 Cyast_0611   Cyanobacterium stanieri PCC 7202 AFZ46588.1    
 Cyagr_0388   Cyanobium gracile PCC 6307 AFY27582.1    
 Cyagr_0651   Cyanobium gracile PCC 6307 AFY27840.1    
 cce_0006   Cyanothece sp. ATCC 51142 ACB49358.1 B1WYC8  
 PCC7424_1654   Cyanothece sp. PCC 7424 ACK70092.1 B7KAY2  
 Cyan7425_2297   Cyanothece sp. PCC 7425 ACL44656.1 B8HW77  
 Cyan7822_0854   Cyanothece sp. PCC 7822 ADN12874.1 E0UCB7  
 Cyan7822_4367   Cyanothece sp. PCC 7822 ADN16281.1 E0UB36  
 PCC8801_1543   Cyanothece sp. PCC 8801 ACK65596.1 B7JUQ2  
 Cylst_5363   Cylindrospermum stagnale PCC 7417 AFZ27386.1    
 Dda3937_02200   Dickeya dadantii 3937 ADM98125.1 E0SLW7  
 Dda3937_02796   Dickeya dadantii 3937 ADM99103.1 E0SIP4  
 Dd586_1486   Dickeya dadantii Ech586 ACZ76354.1 D2BWX0  
 Dd586_2400   Dickeya dadantii Ech586 ACZ77250.1 D2C286  
 Dd703_2111   Dickeya dadantii Ech703 ACS85898.1 C6C704  
 Dd1591_1526   Dickeya zeae Ech1591 ACT06381.1 C6CF31  
 ORF   Enterobacter aerogenes EA1509E CCG33813.1    
 D782_2492   Enterobacteriaceae bacterium strain FGI 57 AGB78456.1    
 EC042_0825   Escherichia coli 042 CBG33651.1 D3GYY0  
 APECO1_4473   Escherichia coli APEC O1 ABJ00298.1 A1A9F8  
 APECO1_4196   Escherichia coli APEC O1 ABJ01758.1 A1ADL8  
 APECO1_3886   Escherichia coli APEC O1 ABJ02069.1 A1AEH9  
 APECO78_04785   Escherichia coli APEC O78 AGC85694.1    
 B21_00728 (R)   Escherichia coli BL21 CAQ31245.1 C5W1U5  
 ECBD_2880   Escherichia coli BL21(DE3) ACT29898.1
ACT42612.1		    
 BWG_3715   Escherichia coli BW2952 K-12 ACR63696.1 C5A0Z7  
 ETEC_2754 (R)   Escherichia coli ETEC H10407 CBJ02258.1 E3PGT1  
 ETEC_0283   Escherichia coli ETEC H10407 CBI99788.1 E3PDP3  
 EcHS_A0304   Escherichia coli HS ABV04693.1 A7ZWN9  
 ECIAI1_2650   Escherichia coli IAI1 CAQ99488.1 B7M8F2  
 ECOK1_3001   Escherichia coli IHE3034 ADE92395.1 D5CYC7  
 ECOK1_0950   Escherichia coli IHE3034 ADE88479.1 D5CYT0  
 ECOK1_2654   Escherichia coli IHE3034 ADE90086.1 D5D7Y9  
 EKO11_4420   Escherichia coli KO11 ADX52975.1
AFH15564.1		    
 EKO11_1396   Escherichia coli KO11 ADX50025.1    
 EKO11_1688   Escherichia coli KO11 ADX50310.1
AFH17429.1		    
 Lysin (fragment)   Escherichia coli LF82 CAP75477.1    
 ECNA114_1218   Escherichia coli NA114 AEG36042.1    
 ECNA114_4034   Escherichia coli NA114 AEG38878.1    
 ECO103_3119   Escherichia coli O103:H2 str. 12009 BAI31870.1 C8U911  
 ECO111_2694   Escherichia coli O111:H- str. 11128 BAI36542.1 C8UCS0  
 E2348_C_2517   Escherichia coli O127:H6 str. E2348/69 CAS10065.1 B7UG35  
 ECH74115_1613   Escherichia coli O157:H7 str. EC4115 ACI36196.1 B5YXF1  
 ECH74115_3045   Escherichia coli O157:H7 str. EC4115 ACI38938.1 B5YUG0  
 Z1876   Escherichia coli O157:H7 EDL933 AAG55973.1    
 ECs1622   Escherichia coli O157:H7 str. Sakai BAB35045.1    
 ECSP_2860   Escherichia coli O157:H7 str. TW14359 ACT72649.1 C6V0R3  
 ECSP_1529   Escherichia coli O157:H7 str. TW14359 ACT71370.1 C6URV2  
 ECO26_3358   Escherichia coli O26:H11 str. 11368 BAI26565.1 C8TV15  
 G2583_3124   Escherichia coli O55:H7 str. CB9615 ADD57652.1 D3QN84  
 ECO55CA74_03335   Escherichia coli O55:H7 str. RM12579 AEZ39284.1    
 NRG857_04695   Escherichia coli O83:H1 str. NRG 857C ADR26366.1 E4PCI4  
 P12B_c1108 (LycV)   Escherichia coli P12b AFG39976.1    
 P12B_c2460 (LycV) (fragment)   Escherichia coli P12b AFG41303.1    
 ECS88_2207   Escherichia coli S88 CAR03493.1 B7MEC0  
 ECS88_2524 (R)   Escherichia coli S88 CAR03799.1 B7MGZ0  
 ECS88_2893   Escherichia coli S88 CAR04143.1 B7MJP3  
 EcSMS35_4330   Escherichia coli SMS-3-5 ACB17505.1 B1LMX9  
 UM146_04950   Escherichia coli UM146 ADN70395.1 E1RSB2  
 UM146_03420   Escherichia coli UM146 ADN70098.1 E1S259  
 ECUMN_0883   Escherichia coli UMN026 CAR12092.1 B7NA40  
 UMNF18_802   Escherichia coli UMNF18 AEJ55420.1    
 UMNK88_296   Escherichia coli UMNK88 AEE54948.1    
 UMNK88_2933   Escherichia coli UMNK88 AEE57497.1    
 UTI89_C2660   Escherichia coli UTI89 ABE08126.1 Q1R938  
 UTI89_C2990   Escherichia coli UTI89 ABE08446.1 Q1R868  
 ECW_m2558   Escherichia coli W ADT75988.1
AFH12165.1		    
 ECW_m2267   Escherichia coli W ADT75706.1
AFH11878.1
AFH13782.1		    
 CDCO157_1555   Escherichia coli Xuzhou21 AFJ28611.1    
 EFER_0597 (R)   Escherichia fergusonii ATCC 35469T CAQ88144.1 B7LJL2  
 FCOL_04360   Flavobacterium columnare ATCC 49512 AEW85706.1    
 GEI7407_3154   Geitlerinema sp. PCC 7407 AFY67622.1    
 Glo7428_3648   Gloeocapsa sp. PCC 7428 AFZ32114.1    
 HELO_2650   Halomonas elongata DSM 2581 type strain: DSM 2581 CBV42534.1 E1V355  
 HCN_1374   Helicobacter cinaedi PAGU611 BAM12578.1    
 Hsero_0902   Herbaspirillum seropedicae SmR1 ADJ62419.1 D8J082  
 A225_3954   Klebsiella oxytoca E718 AFN29708.1    
 KPK_2846   Klebsiella pneumoniae 342 ACI07627.1 B5XR49  
 KPHS_40250   Klebsiella pneumoniae subsp. pneumoniae HS11286 AEW62723.1    
 KPN_04875   Klebsiella pneumoniae subsp. pneumoniae MGH 78578 ATCC 700721 ABR80218.1 A6TE68  
 Mpe_A1848   Methylibium petroleiphilum PM1 ABM94806.1 A2SGW7  
 Mnod_0566   Methylobacterium nodulans ORS 2060 ACL55603.1 B8IDN1  
 M446_4117   Methylobacterium sp. 4-46 ACA18474.1 B0UK35  
 MPQ_1234   Methylovorus sp. MP688 ADQ84398.1 E4QMX1  
 MICA_646   Micavibrio aeruginosavorus ARL-13 AEP08980.1    
 A11S_563   Micavibrio aeruginosavorus EPB AGH97387.1    
 Mic7113_5569   Microcoleus sp. PCC 7113 AFZ21201.1    
 MAE_54690   Microcystis aeruginosa NIES-843 BAG05291.1 B0JGM5  
 autolysin A-like protein   Neisseria gonorrhoeae AAQ03236.1 Q5K692  
 autolysin A (AtlA) (fragment)   Neisseria gonorrhoeae JC1 AAK61534.1 Q93M05  
 peptidoglycan lytic transglycosylase (AtlA) 3.2.1.- Neisseria gonorrhoeae MS11 AAC45714.1
AAK77140.1
AAW83081.1		 O30554  
 NGK_1066 (fragment)   Neisseria gonorrhoeae NCCP11945 ACF29743.1 B4RLQ6  
 Aazo_3701   Nostoc azollae 0708 ADI65254.1 D7E436  
 Npun_F0087   Nostoc punctiforme PCC 73102 ATCC 29133 ACC78888.1 B2J3F8  
 Alr2752   Nostoc sp. PCC 7120 BAB74451.1 Q8YTG5  
 all7671   Nostoc sp. PCC 7120 BAB77314.1 Q8ZS41  
 Nos7524_2260   Nostoc sp. PCC 7524 AFY48104.1    
 OA238_c37020   Octadecabacter arcticus 238 AGI73654.1    
 Oscil6304_0107   Oscillatoria acuminata PCC 6304 AFY79864.1    
 Oscil6304_4068   Oscillatoria acuminata PCC 6304 AFY83597.1    
 Osc7112_0673   Oscillatoria nigro-viridis PCC 7112 AFZ05263.1    
 Osc7112_3725   Oscillatoria nigro-viridis PCC 7112 AFZ08073.1    
 Ple7327_1960   Pleurocapsa sp. PCC 7327 AFY77301.1    
 SL003B_1673   Polymorphum gilvum SL003B-26A1 ADZ70101.1    
 P9303_15601   Prochlorococcus marinus str. MIT 9303 ABM78304.1 A2C9Z4  
 P9303_18641   Prochlorococcus marinus str. MIT 9303 ABM78606.1 A2CAU6  
 PMT0423   Prochlorococcus marinus str. MIT 9313 CAE20598.1 Q7V8D3  
 PMT0664   Prochlorococcus marinus str. MIT 9313 CAE20839.1 Q7V7S4  
 Pse7367_0478   Pseudanabaena sp. PCC 7367 AFY68788.1    
 Psefu_0591   Pseudomonas fulva 12-X AEF20571.1    
 T1E_1384 (R)   Pseudomonas putida DOT-T1E AFO47239.1    
 T1E_1455 (fragment)   Pseudomonas putida DOT-T1E AFO47310.1    
 T1E_1457 (fragment)   Pseudomonas putida DOT-T1E AFO47312.1    
 B479_10470   Pseudomonas putida HB3267 PC9 AGA72996.1    
 B479_16115   Pseudomonas putida HB3267 PC9 AGA74115.1    
 B479_19800   Pseudomonas putida HB3267 PC9 AGA74852.1    
 PP3854   Pseudomonas putida KT2440 AAN69448.1 Q88G71  
 YSA_09150   Pseudomonas putida ND6 AFK71721.1    
 PPS_1271 (fragment)   Pseudomonas putida S16 AEJ11846.1    
 PPS_3241 (fragment)   Pseudomonas putida S16 AEJ13788.1    
 H16_B1313   Ralstonia eutropha H16 CAJ96103.1 Q0K1M1  
 Reut_A2416   Ralstonia eutropha JMP134 AAZ61778.1 Q46YK5  
 RCFBP_20330   Ralstonia solanacearum CFBP2957 CBJ43521.1    
 CMR15_11711   Ralstonia solanacearum CMR15 CBJ37912.1    
 RSc1700   Ralstonia solanacearum GMI1000 CAD15402.1 Q8XYQ8  
 RSMK01628   Ralstonia solanacearum MolK2 CAQ36282.1 B5S318  
 RALSY_40337   Ralstonia syzygii R24 CCA86131.1    
 Riv7116_4980   Rivularia sp. PCC 7116 AFY57386.1    
 Riv7116_6738   Rivularia sp. PCC 7116 AFY59058.1    
 SBG_2823   Salmonella bongori NCTC 12419 CCC31877.1    
 SC0349 (LycV)   Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 AAX64255.1 Q57SQ6  
 SeD_A2276   Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 ACH76827.1 B5FL63  
 CFSAN001992_20175   Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992 AGF84309.1    
 SPC_1293   Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594 ACN45456.1 C0PZH3  
 STY2044   Salmonella enterica subsp. enterica serovar Typhi CT18 CAD05587.1    
 STMMW_31931   Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 CBG26197.1 C9XHB2  
 SENTW_2817 (LycV)   Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1 CBY96898.1    
 SbBS512_E0252 (fragment)   Shigella boydii CDC 3083-94 BS512 ACD08040.1 B2U3U2  
 SFxv_0334   Shigella flexneri 2002017 ADA72671.1 D2A7X6  
 SFV_0279 (fragment)   Shigella flexneri 5 str. 8401 ABF02555.1 Q0T7S1  
 Sinac_5106   Singulisphaera acidiphila DSM 18658 AGA29258.1    
 SFHH103_01646   Sinorhizobium fredii HH103 CCE96143.1    
 SFHH103_01810   Sinorhizobium fredii HH103 CCE96307.1    
 USDA257_c42920   Sinorhizobium fredii USDA 257 AFL52831.1    
 SM2011_c04183   Sinorhizobium meliloti 2011 AGG74603.1    
 Sinme_1828   Sinorhizobium meliloti AK83 AEG53555.1    
 Sinme_1987   Sinorhizobium meliloti AK83 AEG53711.1    
 SinmeB_1307   Sinorhizobium meliloti BL225C AEG04228.1    
 SinmeB_1829   Sinorhizobium meliloti BL225C AEG04737.1    
 C770_GR4Chr2068   Sinorhizobium meliloti GR4 AGA06996.1    
 BN406_01743   Sinorhizobium meliloti Rm41 CCM67788.1    
 SM11_chr1314   Sinorhizobium meliloti SM11 AEH78590.1    
 Sta7437_3093   Stanieria cyanosphaera PCC 7437 AFZ36605.1    
 BurJV3_1477   Burkholderia sp. JV3 AEM50807.1    
 Smlt1054   Stenotrophomonas maltophilia K279a CAQ44615.1 B2FRB3  
 Smal_0896   Stenotrophomonas maltophilia R551-3 ACF50601.1 B4SMC4  
 Smal_2511   Stenotrophomonas maltophilia R551-3 ACF52212.1 B4SNI7  
 sync_1864   Synechococcus sp. CC9311 ABI45324.1 Q0I904  
 sync_1433   Synechococcus sp. CC9311 ABI46176.1 Q0IA84  
 Syncc9605_1036   Synechococcus sp. CC9605 ABB34794.1 Q3AKT8  
 Syncc9605_1453   Synechococcus sp. CC9605 ABB35207.1 Q3AJM5  
 Syncc9902_0937   Synechococcus sp. CC9902 ABB25903.1 Q3AYC4  
 Syncc9902_1047   Synechococcus sp. CC9902 ABB26011.1 Q3AY16  
 Syn6312_1152   Synechococcus sp. PCC 6312 AFY60341.1    
 Syn6312_3566   Synechococcus sp. PCC 6312 AFY62586.1    
 Syn7502_00833   Synechococcus sp. PCC 7502 AFY72965.1    
 Syn7502_01492   Synechococcus sp. PCC 7502 AFY73560.1    
 Syn7502_02005   Synechococcus sp. PCC 7502 AFY74031.1    
 SynRCC307_1446   Synechococcus sp. RCC307 CAK28349.1 A5GTZ0  
 SynRCC307_1425   Synechococcus sp. RCC307 CAK28328.1 A5GTW9  
 SynWH7803_1201   Synechococcus sp. WH 7803 CAK23627.1 A5GL12  
 SynWH7803_0779   Synechococcus sp. WH 7803 CAK23205.1 A5GJU0  
 SYNW1476   Synechococcus sp. WH 8102 CAE07991.1 Q7U664  
 SYNW1313   Synechococcus sp. WH 8102 CAE07828.1 Q7U6M5  
 slr1966 (Slr1966)   Synechocystis sp. PCC 6803 AGF51879.1
BAA18191.1
BAK50364.1		 P74105  
 slr0795   Synechocystis sp. PCC 6803 AGF52992.1
BAA10701.1
BAK51486.1		 Q55936  
 SYNGTI_1616 (Slr1966)   Synechocystis sp. PCC 6803 substr. GT-I BAL29363.1    
 SYNGTI_2737 (Slr0795)   Synechocystis sp. PCC 6803 substr. GT-I BAL30484.1    
 SYNPCCN_1615 (Slr1966)   Synechocystis sp. PCC 6803 substr. PCC-N BAL32532.1    
 SYNPCCN_2736 (Slr0795)   Synechocystis sp. PCC 6803 substr. PCC-N BAL33653.1    
 SYNPCCP_2736 (Slr0795)   Synechocystis sp. PCC 6803 substr. PCC-P BAL36822.1    
 SYNPCCP_1615 (Slr1966)   Synechocystis sp. PCC 6803 substr. PCC-P BAL35701.1    
 TASI_0461 (possible fragment)   Taylorella asinigenitalis MCE3 AEP36236.1    
 tll1028   Thermosynechococcus elongatus BP-1 BAC08581.1 Q8DK42  
 Thimo_0895   Thioflavicoccus mobilis 8321 AGA89726.1    
 Tery_1004   Trichodesmium erythraeum IMS101 ABG50382.1 Q117E2  
 Tery_3944   Trichodesmium erythraeum IMS101 ABG52973.1 Q10XQ1  
 XOO2935 + XOO2934   Xanthomonas oryzae pv. oryzae KACC10331 AAW76188.1
AAW76189.1		    
 XOO2786 + XOO2785   Xanthomonas oryzae pv. oryzae MAFF 311018 BAE69540.1
BAE69541.1		    
 PXO_00141 + PXO_00139   Xanthomonas oryzae pv. oryzae PXO99A ACD58328.1
ACD58330.1		    
 XOC_2764   Xanthomonas oryzae pv. oryzicola BLS256 AEQ96872.1    
 YpsIP31758_2206   Yersinia pseudotuberculosis IP 31758 ABS45940.1 A7FIU8  
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