Glycoside Hydrolase Family 104

Activities in Familypeptidoglycan lytic transglycosylase (EC 3.2.1.-)
Mechanism Retaining
NoteCorresponds to family 4 of the peptidoglycan lytic transglycosylases described by N.T. Blackburn and A.J. Clarke (2001) J. Mol. Evol. 52, 78-84
External resourcesCAZypedia;
Statistics GenBank accession (1144); Uniprot accession (130); PDB accession (3); 3D entries (1); cryst (0)
| 1 | 2 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 ATY45_08525 (fragment)   Xanthomonas oryzae pv. oryzae PXO236 AOS14554.1    
 ATY46_14550 (fragment)   Xanthomonas oryzae pv. oryzae PXO282 AOS19695.1    
 ATY46_14555 (fragment)   Xanthomonas oryzae pv. oryzae PXO282 AOS19696.1    
 ATY47_14480 (fragment)   Xanthomonas oryzae pv. oryzae PXO524 AOS23853.1    
 ATY47_14485 (fragment)   Xanthomonas oryzae pv. oryzae PXO524 AOS23854.1    
 ATY48_14335 (fragment)   Xanthomonas oryzae pv. oryzae PXO563 AOS28002.1    
 ATY48_14340 (fragment)   Xanthomonas oryzae pv. oryzae PXO563 AOS28003.1    
 ATY49_14300 (fragment)   Xanthomonas oryzae pv. oryzae PXO602 AOS32150.1    
 ATY49_14305 (fragment)   Xanthomonas oryzae pv. oryzae PXO602 AOS32151.1    
 ATY42_14235 (fragment)   Xanthomonas oryzae pv. oryzae PXO71 AOS03054.1    
 ATY42_14230 (fragment)   Xanthomonas oryzae pv. oryzae PXO71 AOS03053.1    
 APZ20_08695 (fragment)   Xanthomonas oryzae pv. oryzae PXO83 ALZ71557.1    
 APZ20_08700 (fragment)   Xanthomonas oryzae pv. oryzae PXO83 ALZ71558.1    
 PXO_00141 + PXO_00139   Xanthomonas oryzae pv. oryzae PXO99A ACD58328.1
ACD58330.1
   
 ABM06_14455 (fragment)   Xanthomonas oryzae pv. oryzae XF89b AQU46002.1    
 ABM06_14450 (fragment)   Xanthomonas oryzae pv. oryzae XF89b AQU46001.1    
 XOC_2764   Xanthomonas oryzae pv. oryzicola BLS256 AEQ96872.1    
 ACU15_08540   Xanthomonas oryzae pv. oryzicola BXOR1 AKO00545.1    
 ACU11_05075   Xanthomonas oryzae pv. oryzicola CFBP2286 AKO18932.1    
 ACU11_12485   Xanthomonas oryzae pv. oryzicola CFBP2286 AKO20155.1    
 ACU16_19720   Xanthomonas oryzae pv. oryzicola CFBP7331 AKO05995.1    
 ACU16_09185   Xanthomonas oryzae pv. oryzicola CFBP7331 AKO04293.1    
 ACU17_19725   Xanthomonas oryzae pv. oryzicola CFBP7341 AKO09909.1    
 ACU17_09035   Xanthomonas oryzae pv. oryzicola CFBP7341 AKO08181.1    
 BE73_13400   Xanthomonas oryzae pv. oryzicola CFBP7342 AJQ87941.1    
 FE36_11340   Xanthomonas oryzae pv. oryzicola YM15 AKK64379.1    
 AT01_737   Yersinia aldovae 670-83 AJJ62664.1    
 LI89_12275   Yersinia enterocolitica FORC-002 ALG45475.1    
 FORC2_1791   Yersinia enterocolitica FORC_002 AKF37938.1    
 LC20_03248   Yersinia enterocolitica LC20 AHM74501.1    
 CRN75_08965   Yersinia frederiksenii FDAARGOS_418 ATM95504.1    
 BZ20_2943 (R) (fragment)   Yersinia pseudotuberculosis EP2/+ AJJ05814.1    
 YpsIP31758_2206   Yersinia pseudotuberculosis IP 31758 ABS45940.1 A7FIU8  
 BZ19_1220   Yersinia pseudotuberculosis str. PA3606 AJK15448.1    
unclassified
Protein Name EC#OrganismGenBank UniprotPDB/3D
 MCM2015_pMC1_45   biofilter metagenome CVK35486.1    
Viruses
Protein Name EC#OrganismGenBank UniprotPDB/3D
 ORF   Aeromonas phage PAS-1 AEM36042.1    
 phiO18_34 (LyS)   Aeromonas virus phiO18P ABG73185.1 A5X9I5  
 ORF   Agrobacterium phage Atu_ph07 ASV44767.1    
 gp18   Burkholderia phage BcepNazgul AAQ63338.2
AAQ63338.1
Q6UYK3  
 lytic transglycosylase (Gp22;BcepC6Bgp22) 4.2.2.n1 Burkholderia virus BcepC6B AAT38381.1 Q6J1Q5  
 TIM40_20   Cyanophage P-TIM40 AJK27447.1    
 ECRS218_0027   Enterobacteria phage CUS-3 ABQ88407.1 A5VW81  
 ECD_10030 (R)   Enterobacteria phage DE3 ACF32378.1 C6ZCX1  
 lysozyme (K)   Enterobacteria phage fiAA91-ss AGX84604.1    
 HK106_062   Enterobacteria phage HK106 AFH20750.1    
 HK140_067   Enterobacteria phage HK140 AFH20307.1    
 HK446_056   Enterobacteria phage HK446 AFH20684.1    
 HK542_052   Enterobacteria phage HK542 AFH20433.1    
 HK544_060   Enterobacteria phage HK544 AFH20625.1    
 HK629_063   Enterobacteria phage HK629 AFM76547.1    
 HK630_064   Enterobacteria phage HK630 AFH20817.1    
 HK633_064   Enterobacteria phage HK633 AFH20500.1    
 lysozyme (R)   Enterobacteria phage IME10 AEQ38609.1
AER08021.1
   
 IME_EC2_6   Enterobacteria phage IME_EC2 AGZ17797.1    
 mEp043_066   Enterobacteria phage mEp043 c-1 AFM76477.1    
 mEp235_057   Enterobacteria phage mEp235 AFM76275.1    
 mEpX1_059   Enterobacteria phage mEpX1 AFM76030.1    
 mEpX2_061   Enterobacteria phage mEpX2 AFM75964.1    
 lysin (PeclyS)   Enterobacteria phage pEcSw AJF48919.1    
 Sf101_0059   Enterobacteria phage Sf101 AII27883.1    
 R   Enterobacteria phage SfV AAL89452.1 Q8SBE0  
 gpK   Enterobacteria phage WPhi AAN28227.1 Q7Y4E4  
 mEp213_069   Enterobacterial phage mEp213 AFM76409.1    
 mEp234_056   Enterobacterial phage mEp234 AFM76335.1    
 ECTP14_02291   Escherichia coli O157 typing phage 14 AKE47060.1    
 ECTP4_00559   Escherichia coli O157 typing phage 4 AKE45433.1    
 ECTP5_00784   Escherichia coli O157 typing phage 5 AKE45651.1    
 APCEc02_135   Escherichia phage APCEc02 AKO61889.1    
 APCJM32_12   Escherichia phage APC_JM3.2 ATN92718.1    
 ECP1_017   Escherichia phage ECP1 ASJ79471.1    
 lysozyme   Escherichia phage FFH2 AHN83670.1    
 FV3_00082   Escherichia phage FV3 AEZ65218.1    
 HK75_53   Escherichia phage HK75 ADO67680.1    
 Ec2_0083   Escherichia phage JES2013 AGM12472.1    
 CPT_Murica81   Escherichia phage Murica AKU44173.1    
 pro147_21   Escherichia phage pro147 AKH49337.1    
 pro483_21   Escherichia phage pro483 AKH49381.1    
 Phage lysozyme   Escherichia phage slur12 CUL03132.1    
 lysozyme   Escherichia phage slur16 CUL01534.1    
 lysozyme   Escherichia phage V5 ABI79155.1 B3RGM4  
 Orf33   Escherichia phage vB_EcoM_ECO1230-10 ADE87938.1 D5LH07  
 vBEcoMECOO78_03   Escherichia phage vB_EcoM_ECOO78 ARM70408.1    
 P   Escherichia virus 186 AAC34155.1 O80309  
 lysin   Escherichia virus HK022 AAF30387.1 Q9MCT2  
 gp71   Escherichia virus HK97 AAF31145.1 Q9MCN4  
 lytic transglycosylase (R;158) 4.2.2.n1 Escherichia virus Lambda AAA96598.1
ALA45749.1
C6ZCX1
P03706
1AM7[A,B,C]
1D9U[A,B]
3D3D[A,B]
 lytic transglycosylase (GpK;P2gp09) 4.2.2.n1 Escherichia virus P2 AAD03276.1 P51771  
 phage lysin   Escherichia virus P2 AGG36525.1    
 lysin   Klebsiella phage vB_KpnS_IME279 ATI16404.1    
 ZF40_0057   Pectobacterium phage ZF40 AFC22509.1    
 phi297_00064   Pseudomonas phage phi297 AEX55866.1    
 POR1_26   Pseudomonas phage POR1 ALH46231.1    
 SKUL_29   Pseudomonas phage Skulduggery ARV77128.1    
 Orf31   Pseudomonas virus D3 AAF80791.1 Q9MC90  
 PMG1_00031   Pseudomonas virus PMG1 AEX55902.1    
 RHEph02_gp016   Rhizobium phage RHEph02 AGC35583.1    
 RHEph03_gp017   Rhizobium phage RHEph03 AGC35644.1    
 RHEph08_gp016   Rhizobium phage RHEph08 AGC35940.1    
 RHEph09_gp012   Rhizobium phage RHEph09 AGC35995.1    
 lysin   Salmonella phage 64795_sal3 ANH50844.1    
 epsilon34_gp65 (65)   Salmonella phage epsilon34 ACF16690.1 B9UDJ1  
 SP004_00045   Salmonella phage FSL SP-004 AGF88422.1    
 lysin (59)   Salmonella phage g341c ACN18339.1 C6ZR65  
 R   Salmonella phage HK620 AAK28884.1 Q77IT9  
 lysin   Salmonella phage IME207 ANW46813.1
AOK82635.1
   
 LPST10_00059   Salmonella phage LPST10 ARK07791.1    
 SEN1_10   Salmonella phage SEN1 ALF02248.1    
 SEN8_10   Salmonella phage SEN8 ALF02388.1    
 VIP0007   Salmonella phage Vi II-E1 CAM33112.1 B1GS82  
 lytic transglycosylase (Gp10;PsP3gp10) 4.2.2.n1 Salmonella virus PsP3 AAN08372.1 Q6K1I1  
 Sf11_gp56   Shigella phage Sf11 ATE85703.1    
 orf62   Shigella phage Sf6 AAQ12247.1 Q716B5  
 SfII_52 (R)   Shigella phage SfII AGQ45542.1    
 SfIV_51   Shigella phage SfIV AGY37102.1    
 endonuclease (fragment)   uncultured marine virus AKH48818.1    
 PlyM22   uncultured phage ADF97547.1 D6QWN6  
 DIBBI_078   Xanthomonas phage vB_XveM_DIBBI AEX65746.1    
 gpK   Yersinia phage L-413C AAP04446.1 Q76ZD6  
Top


Last update: 2017-12-01 © Copyright 1998-2017
AFMB - CNRS - Université d'Aix-Marseille