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Carbohydrate-Binding Module Family 9

Known ActivitiesModules of approx. 170 residues found so far only in xylanases. The cellulose-binding function has been demonstrated in one case.
3D Structure Statusβ-sandwich
NotePreviously known as cellulose-binding domain family IX (CBD IX).
External resourcesInterPro; PFAM;
Statistics GenBank accession (189); Uniprot accession (114); PDB accession (3); 3D entries (1); cryst (0)
Summary
All (224) Archaea (1) Bacteria (218) Eukaryota (1) unclassified (4) Structure (1 )
Bacteria
Protein Name EC#OrganismGenBankUniprotPDB/3D
 AciX9_2068   Acidobacterium sp. MP5ACTX9 ADW69113.1    
 xylanase E (XynE)   Aeromonas caviae ME-1 BAA34091.1 Q9Z485  
 xylanase E (XynE)   Aeromonas caviae ME-1 BAA34091.1 Q9Z485  
 MADE_03943   Alteromonas macleodii 'Deep ecotype' ACG68233.1
AEB00075.1		 B4S137  
 ambt_21200   Alteromonas sp. SN2 AEF05731.1    
 ANT_28690   Anaerolinea thermophila UNI-1 BAJ64895.1    
 Bcell_0541   Bacillus cellulosilyticus DSM 2522 ADU28823.1 D2LWA8  
 BF638R_1893   Bacteroides fragilis 638R CBW22417.1 E1WV94  
 BF1924   Bacteroides fragilis NCTC 9343 CAH07622.1 Q5LE31  
 BF1858   Bacteroides fragilis YCH46 BAD48606.1    
 Bache_0507   Bacteroides helcogenes P 36-108 ATCC 35417 ADV42532.1    
 BVU_4051   Bacteroides vulgatus ATCC 8482 ABR41653.1 A6L7I9  
 Bcav_0914   Beutenbergia cavernae DSM 12333 ACQ79175.1 C5BZK3  
 Bcav_1252   Beutenbergia cavernae DSM 12333 ACQ79512.1 C5C1P4  
 Bcav_1252   Beutenbergia cavernae DSM 12333 ACQ79512.1 C5C1P4  
 Bfae_04810   Brachybacterium faecium DSM 4810 ACU84350.1 C7MHE1  
 CIY_22490   Butyrivibrio fibrisolvens 16/4 CBK74925.1 D4IVY2  
 bpr_I0026 (Xyn10B)   Butyrivibrio proteoclasticus B316 ADL32778.1 E0S2F5  
 bpr_I0026 (Xyn10B)   Butyrivibrio proteoclasticus B316 ADL32778.1 E0S2F5  
 Calhy_0074   Caldicellulosiruptor hydrothermalis 108 ADQ05836.1 E4Q9G5  
 Calkr_2245   Caldicellulosiruptor kristjanssonii 177R1B ADQ41707.1 E4S6E9  
 Calkr_2245   Caldicellulosiruptor kristjanssonii 177R1B ADQ41707.1 E4S6E9  
 Calkr_2245   Caldicellulosiruptor kristjanssonii 177R1B ADQ41707.1 E4S6E9  
 Calkro_0091   Caldicellulosiruptor kronotskyensis 2002 ADQ45007.1 E4SCF2  
 Calkro_0402   Caldicellulosiruptor kronotskyensis 2002 ADQ45302.1 E4SE15  
 Calkro_0402   Caldicellulosiruptor kronotskyensis 2002 ADQ45302.1 E4SE15  
 Calla_0206   Caldicellulosiruptor lactoaceticus 6A AEM72886.1    
 Calla_0206   Caldicellulosiruptor lactoaceticus 6A AEM72886.1    
 Calow_1924   Caldicellulosiruptor owensensis OL ADQ05453.1 E4Q5G9  
 Calow_1924   Caldicellulosiruptor owensensis OL ADQ05453.1 E4Q5G9  
 xylanase B (XynB)   Caldicellulosiruptor sp. Rt69B.1 AAB95325.1
CAA03086.1
CAE84530.1		 O52373  
 xylanase B (XynB)   Caldicellulosiruptor sp. Rt69B.1 AAB95325.1 O52373  
 Cabther_A1196   Candidatus Chloracidobacterium thermophilum B AEP11950.1    
 Ccan_22850   Capnocytophaga canimorsus Cc5 AEK24400.1    
 xylanase C (XynC;XylC)   Cellulomonas fimi ATCC 484 CAA90745.1 Q59278  
 xylanase C (XynC;XylC)   Cellulomonas fimi ATCC 484 CAA90745.1 Q59278  
 Celf_0574   Cellulomonas fimi ATCC 484 AEE44714.1    
 Celf_0574   Cellulomonas fimi ATCC 484 AEE44714.1    
 Cfla_0639   Cellulomonas flavigena DSM 20109 ADG73551.1 D5UIQ2  
 Cfla_0638   Cellulomonas flavigena DSM 20109 ADG73550.1 D5UIQ1  
 Celal_1435   Cellulophaga algicola DSM 14237 ADV48748.1    
 Celly_2335   Cellulophaga lytica DSM 7489 ADY30154.1    
 Celgi_2403   Cellvibrio gilvus ATCC 13127 AEI12902.1    
 Celgi_2403   Cellvibrio gilvus ATCC 13127 AEI12902.1    
 Cpin_0563   Chitinophaga pinensis DSM 2588 ACU58061.1 C7PH82  
 Cpin_4979   Chitinophaga pinensis DSM 2588 ACU62412.1 C7PPK2  
 Cpin_4979   Chitinophaga pinensis DSM 2588 ACU62412.1 C7PPK2  
 Ccel_0993   Clostridium cellulolyticum H10 ATCC 35319 ACL75355.1 B8I995  
 Ccel_3463   Clostridium cellulolyticum H10 ATCC 35319 ACL77751.1 B8I288  
 Ccel_2669   Clostridium cellulolyticum H10 ATCC 35319 ACL76991.1 B8I6Z9  
 Ccel_2320   Clostridium cellulolyticum H10 ATCC 35319 ACL76656.1 B8I5C0  
 Ccel_2319   Clostridium cellulolyticum H10 ATCC 35319 ACL76655.1 B8I5B9  
 Clocl_1543   Clostridium clariflavum DSM 19732 AEV68181.1    
 Clocl_1543   Clostridium clariflavum DSM 19732 AEV68181.1    
 Clocl_1543   Clostridium clariflavum DSM 19732 AEV68181.1    
 Clocl_2435   Clostridium clariflavum DSM 19732 AEV69010.1    
 Clocl_2435   Clostridium clariflavum DSM 19732 AEV69010.1    
 Clocl_2435   Clostridium clariflavum DSM 19732 AEV69010.1    
 Clocl_0282   Clostridium clariflavum DSM 19732 AEV67023.1    
 Clocl_2194   Clostridium clariflavum DSM 19732 AEV68786.1    
 Clocl_2194   Clostridium clariflavum DSM 19732 AEV68786.1    
 xylanase A (XynA) (Xyn10A)   Clostridium josui FERM P-9684 BAB20931.1 Q9F1V3  
 Clole_0518   Clostridium lentocellum DSM 5427 ADZ82256.1    
 Clo1100_2769   Clostridium sp. BNL1100 AEY66927.1    
 Clo1100_4082   Clostridium sp. BNL1100 AEY68182.1    
 Clo1100_2768   Clostridium sp. BNL1100 AEY66926.1    
 Clo1100_3348   Clostridium sp. BNL1100 AEY67493.1    
 xylanase C / β-1,3-1,4-glucanase (XynC) (Xyn10B)   Clostridium stercorarium BAA82143.1 Q9XDV5  
 celloxylanase (CelX;XynC) (Xyn10C)   Clostridium stercorarium NCIMB 11745 CAD48314.1 Q8GJ37  
 xylanase X (XynX)   Clostridium thermocellum ATCC 27405 AAA23227.1 P38535  
 xylanase X (XynX)   Clostridium thermocellum ATCC 27405 AAA23227.1 P38535  
 CPS_3694   Colwellia psychrerythraea 34H BAA-681 AAZ26785.1 Q47XV8  
 CPS_3715   Colwellia psychrerythraea 34H BAA-681 AAZ28305.1 Q47XT8  
 Cwoe_5445   Conexibacter woesei DSM 14684 ADB53850.1 D3EZL2  
 Cycma_1187   Cyclobacterium marinum DSM 745 AEL24959.1    
 Cycma_1475   Cyclobacterium marinum DSM 745 AEL25244.1    
 Cycma_2043   Cyclobacterium marinum DSM 745 AEL25790.1    
 Cycma_3923   Cyclobacterium marinum DSM 745 AEL27632.1    
 Cycma_4274   Cyclobacterium marinum DSM 745 AEL27977.1    
 Cycma_2521   Cyclobacterium marinum DSM 745 AEL26260.1    
 Cycma_4443   Cyclobacterium marinum DSM 745 AEL28145.1    
 CHU_1221   Cytophaga hutchinsonii ATCC 33406 ABG58494.1 Q11VS2  
 CHU_1238   Cytophaga hutchinsonii ATCC 33406 ABG58510.1 Q11VQ6  
 CHU_1240   Cytophaga hutchinsonii ATCC 33406 ABG58512.1 Q11VQ4  
 CHU_3727   Cytophaga hutchinsonii ATCC 33406 ABG60960.1 Q11NQ3  
 CHU_2040   Cytophaga hutchinsonii ATCC 33406 ABG59303.1 Q11TG1  
 CHU_2041   Cytophaga hutchinsonii ATCC 33406 ABG59304.1 Q11TG0  
 CHU_2042   Cytophaga hutchinsonii ATCC 33406 ABG59305.1 Q11TF9  
 CHU_2043   Cytophaga hutchinsonii ATCC 33406 ABG59306.1 Q11TF8  
 CHU_2044   Cytophaga hutchinsonii ATCC 33406 ABG59307.1 Q11TF7  
 CHU_2379   Cytophaga hutchinsonii ATCC 33406 ABG59637.1 Q11SH7  
 DICTH_0479   Dictyoglomus thermophilum H-6-12 ATCC 35947 ACI19612.1 B5YCV3  
 Dtur_0643   Dictyoglomus turgidum DSM 6724 ACK41928.1 B8DZJ5  
 xylanase (Dtur_1715)   Dictyoglomus turgidum DSM 6724 ACK42987.1 B8E3B3  
 xylanase (Dtur_1715)   Dictyoglomus turgidum DSM 6724 ACK42987.1 B8E3B3  
 Dtur_0374   Dictyoglomus turgidum DSM 6724 ACK41678.1 B8DZ52  
 Dfer_4864   Dyadobacter fermentans DSM 18053 ACT96065.1 C6W5X6  
 xylanase   Eubacterium ruminantium BAA09971.1 Q47871  
 FB2170_01417   Flavobacteriales bacterium HTCC2170 EAQ99991.1 A4AVR1  
 FB2170_11461   Flavobacteriales bacterium HTCC2170 EAR01335.1 A4ARW2  
 Fjoh_2035   Flavobacterium johnsoniae UW101 ABQ05066.1 A5FIA0  
 Fjoh_2869   Flavobacterium johnsoniae UW101 ABQ05890.1 A5FFX3  
 Glaag_0965   Glaciecola agarilytica 4H-3-7+YE-5 AEE21926.1    
 GNIT_1526   Glaciecola nitratireducens FR1064 AEP29644.1    
 Hoch_0364   Haliangium ochraceum DSM 14365 ACY13005.1 D0LIX6  
 Halhy_1932   Haliscomenobacter hydrossis DSM 1100 AEE49817.1    
 Intca_1418   Intrasporangium calvum DSM 43043 ADU47934.1    
 Isop_2355   Isosphaera pallida ATCC 43644 ADV62932.1    
 Jden_1648   Jonesia denitrificans DSM 20603 ACV09296.1 C7R5M3  
 Kfla_6046   Kribbella flavida DSM 17836 ADB35049.1 D2PSZ7  
 Kfla_0439   Kribbella flavida DSM 17836 ADB29562.1 D2PUP4  
 Krodi_2693   Krokinobacter diaphorus 4H-3-7-5 AEE20669.1    
 Mahau_2088   Mahella australiensis 50-1 BON AEE97260.1    
 MTES_1035   Microbacterium testaceum StLB037 BAJ73999.1    
 Micau_3790   Micromonospora aurantiaca ATCC 27029 ADL47314.1 D9T078  
 ML5_4626   Micromonospora sp. L5 ADU10102.1 D3C4R1  
 Murru_0937   Muricauda ruestringensis DSM 13258 AEM69984.1    
 LILAB_20800   Myxococcus fulvus HW-1 AEI66060.1    
 MXAN_2624   Myxococcus xanthus DK 1622 ABF91795.1 Q1D930  
 Niako_1654   Niastella koreensis GR20-10 AEV98021.1    
 Niako_1654   Niastella koreensis GR20-10 AEV98021.1    
 Niako_5907   Niastella koreensis GR20-10 AEW02137.1    
 Oter_1101   Opitutus terrae PB90-1 ACB74389.1 B1ZNF5  
 xylanase C (XynC;X-K)   Paenibacillus barcinonensis BP-23 CAA07173.1 O69230  
 xylanase C (XynC;X-K)   Paenibacillus barcinonensis BP-23 CAA07173.1 O69230  
 xylanase 10A (Xyn10A)   Paenibacillus curdlanolyticus B-6 ABZ80916.1 B1A3N2  
 KNP414_00310   Paenibacillus mucilaginosus KNP414 AEI38935.1    
 KNP414_04340   Paenibacillus mucilaginosus KNP414 AEI42872.1    
 KNP414_04346   Paenibacillus mucilaginosus KNP414 AEI42878.1    
 KNP414_04346   Paenibacillus mucilaginosus KNP414 AEI42878.1    
 KNP414_00305   Paenibacillus mucilaginosus KNP414 AEI38930.1    
 KNP414_01749   Paenibacillus mucilaginosus KNP414 AEI40311.1    
 KNP414_04567   Paenibacillus mucilaginosus KNP414 AEI43097.1    
 Pjdr2_4255   Paenibacillus sp. JDR-2 ACT02879.1 C6D776  
 Pjdr2_4255   Paenibacillus sp. JDR-2 ACT02879.1 C6D776  
 Pjdr2_1488   Paenibacillus sp. JDR-2 ACT00163.1 C6CWU9  
 methylglucuronoxylan xylanase A (XynA1;XynA;Pjdr2_0221)   Paenibacillus sp. JDR-2 ACS98901.1
CAI79477.1		 Q53I45  
 xylanase 5 (Xyn5)   Paenibacillus sp. W-61 BAC45001.1 Q8GHJ4  
 GYMC10_6048   Paenibacillus sp. Y412MC10 ACX68253.1 D3EGA3  
 GYMC10_0901   Paenibacillus sp. Y412MC10 ACX63201.1 D3EE78  
 GYMC10_0901   Paenibacillus sp. Y412MC10 ACX63201.1 D3EE78  
 BDI_2286   Parabacteroides distasonis ATCC 8503 ABR44012.1 A6LE98  
 Pmob_0231   Petrotoga mobilis SJ95 ABX30975.1 A9BJ30  
 Pmob_0231   Petrotoga mobilis SJ95 ABX30975.1 A9BJ30  
 PBPRB0151   Photobacterium profundum SS9 CAG22024.1    
 Patl_3388   Pseudoalteromonas atlantica T6c ABG41894.1 Q15QE4  
 PSM_A0185   Pseudoalteromonas sp. SM9913 ADT67142.1    
 RB10165   Rhodopirellula baltica SH 1 CAD78738.1    
 Rmar_2792   Rhodothermus marinus DSM 4252 ACY49661.1 D0MH72  
 Rhom172_2806   Rhodothermus marinus SG0.5JP17-172 AEN74689.1    
 RO1_31190   Roseburia intestinalis XB6B4 CBL13458.1 D4L1G8  
 RO1_31190   Roseburia intestinalis XB6B4 CBL13458.1 D4L1G8  
 Runsl_2498   Runella slithyformis DSM 19594 AEI48902.1    
 Runsl_4749   Runella slithyformis DSM 19594 AEI51067.1    
 Runsl_5335   Runella slithyformis DSM 19594 AEI51628.1    
 SACE_3337   Saccharopolyspora erythraea NRRL 2338 CAM02612.1 A4FEY7  
 SRU_0370   Salinibacter ruber DSM 13855 M31 ABC44432.1 Q2S5L5  
 SRM_00447   Salinibacter ruber M8 CBH23368.1    
 Sfri_3136   Shewanella frigidimarina NCIMB 400 ABI72973.1 Q07YE1  
 swp_4294   Shewanella piezotolerans WP3 ACJ30945.1 B8CU89  
 Acid_2798   Solibacter usitatus Ellin6076 ABJ83784.1 Q023Q6  
 Acid_2876   Solibacter usitatus Ellin6076 ABJ83862.1 Q023I4  
 sce8541   Sorangium cellulosum 'So ce 56' CAN98711.1 A9FZ52  
 Slin_5503   Spirosoma linguale DSM 74 ADB41469.1 D2QG06  
 Slin_3963   Spirosoma linguale DSM 74 ADB39953.1 D2QIM7  
 STAUR_3356   Stigmatella aurantiaca DW4/3-1 ADO71148.1 E3FYM3  
 TERTU_1900   Teredinibacter turnerae T7901 ACR13983.1 C5BI07  
 AciPR4_4195   Terriglobus saanensis SP1PR4 ADV84940.1 E1N1E0  
 Thit_0192   Thermoanaerobacter italicus Ab9 ADD01520.1 D3T5Y9  
 Thit_0192   Thermoanaerobacter italicus Ab9 ADD01520.1 D3T5Y9  
 Tmath_0251   Thermoanaerobacter mathranii subsp. mathranii str. A3 ADH60034.1 D7ARC5  
 Tmath_0251   Thermoanaerobacter mathranii subsp. mathranii str. A3 ADH60034.1 D7ARC5  
 xylanase A (XynA)   Thermoanaerobacterium saccharolyticum B6A-RI AAA21812.1 P36917.1  
 xylanase A (XynA)   Thermoanaerobacterium saccharolyticum B6A-RI AAA21812.1 P36917.1  
 xylanase (XynA)   Thermoanaerobacterium sp. 'JW/SL YS485' AAC43719.1 Q60043  
 xylanase (XynA)   Thermoanaerobacterium sp. 'JW/SL YS485' AAC43719.1 Q60043  
 xylanase (XynA) (salt-tolerant)   Thermoanaerobacterium sp. NTOU2 ADB23440.1    
 xylanase (XynA) (salt-tolerant)   Thermoanaerobacterium sp. NTOU2 ADB23440.1    
 Tthe_0992   Thermoanaerobacterium thermosaccharolyticum DSM 571 ADL68522.1 D9TMZ9  
 Tthe_0992   Thermoanaerobacterium thermosaccharolyticum DSM 571 ADL68522.1 D9TMZ9  
 xylanase A (XynA)   Thermoanaerobacterium thermosulfurigenes EM1 AAB08046.1 Q60046  
 xylanase A (XynA)   Thermoanaerobacterium thermosulfurigenes EM1 AAB08046.1 Q60046  
 Thexy_1730   Thermoanaerobacterium xylanolyticum LX-11 AEF17757.1    
 Thexy_1730   Thermoanaerobacterium xylanolyticum LX-11 AEF17757.1    
 Tter_2529   Thermobaculum terrenum ATCC BAA-798 ACZ43418.1 D1CI47  
 Tter_2109   Thermobaculum terrenum ATCC BAA-798 ACZ43011.1 D1CGZ0  
 xylanase A (XynA;Tm0061) (Xyl10A)   Thermotoga maritima MSB8 AAD35155.1
CAA86406.1
NP_227877.1		 Q60037 1I82[A]
1I8A[A]
1I8U[A]
 xylanase A (XynA;Tm0061) (Xyl10A)   Thermotoga maritima MSB8 AAD35155.1
CAA86406.1
NP_227877.1		 Q60037  
 Tnap_0691   Thermotoga naphthophila RKU-10 ADA66786.1 D2C750  
 Tnap_0691   Thermotoga naphthophila RKU-10 ADA66786.1 D2C750  
 CTN_1302   Thermotoga neapolitana DSM 4359 ACM23478.1 B9K945  
 CTN_1302   Thermotoga neapolitana DSM 4359 ACM23478.1 B9K945  
 xylanase A (XynA;CTN_0632)   Thermotoga neapolitana DSM 4359 ACM22808.1
CAA87069.1		 B9K775
Q60042		  
 xylanase A (XynA;CTN_0632)   Thermotoga neapolitana DSM 4359 ACM22808.1
CAA87069.1		 B9K775
Q60042		  
 Tpet_0863   Thermotoga petrophila RKU-1 ABQ46882.1 A5IL09  
 Tpet_0863   Thermotoga petrophila RKU-1 ABQ46882.1 A5IL09  
 TRQ2_0885   Thermotoga sp. RQ2 ACB09237.1 B1LA89  
 TRQ2_0885   Thermotoga sp. RQ2 ACB09237.1 B1LA89  
 TRQ2_1549   Thermotoga sp. RQ2 ACB09885.1 B1LC77  
 TRQ2_1549   Thermotoga sp. RQ2 ACB09885.1 B1LC77  
 xylanase B (XynB)   Thermotoga sp. strain FjSS3-B.1 AAD32593.1
AAD32593.2		 Q9R6T4  
 xylanase B (XynB)   Thermotoga sp. strain FjSS3-B.1 AAD32593.1
AAD32593.2		 Q9R6T4  
 xylanase C (XynC)   Thermotoga sp. strain FjSS3-B.1 AAD32594.1 Q9WWJ9  
 xylanase C (XynC)   Thermotoga sp. strain FjSS3-B.1 AAD32594.1 Q9WWJ9  
 Theth_1635   Thermotoga thermarum DSM 5069 AEH51685.1    
 Theth_1635   Thermotoga thermarum DSM 5069 AEH51685.1    
 Kole_1178   Thermotogales bacterium TBF 19.5.1 ACR79878.1 C5CIL6  
 Kole_0690   Thermotogales bacterium TBF 19.5.1 ACR79406.1 C5CFI8  
 TREAZ_2741   Treponema azotonutricium ZAS-9 AEF80243.1    
 TREPR_1441   Treponema primitia ZAS-2 AEF84778.1    
 Chi12   uncultured bacterium BAF02568.1 Q0WY12  
 VAB18032_09100   Verrucosispora maris AB-18-032 AEB42938.1    
 VAB18032_18365   Verrucosispora maris AB-18-032 AEB44775.1    
 VV0542   Vibrio vulnificus YJ016 BAC93306.1
NP_933335.1		 Q7MP22  
 xylanase (Xyn10B)   Xylanimicrobium pachnodae AAD54768.1 Q9RQB7  
 Xcel_2684   Xylanimonas cellulosilytica DSM 15894 ACZ31698.1 D1BXQ7  
 Xcel_2683   Xylanimonas cellulosilytica DSM 15894 ACZ31697.1 D1BXQ6  
 ZPR_4181   Zunongwangia profunda SM-A87 SMA-87 ADF54484.1 D5BAF8  




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