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Carbohydrate-Binding Module Family 9

Known ActivitiesModules of approx. 170 residues found so far only in xylanases. The cellulose-binding function has been demonstrated in one case.
3D Structure Statusβ-sandwich
NotePreviously known as cellulose-binding domain family IX (CBD IX).
External resourcesInterPro; PFAM;
Statistics GenBank accession (189); Uniprot accession (114); PDB accession (3); 3D entries (1); cryst (0)
Summary
All (224) Archaea (1) Bacteria (218) Eukaryota (1) unclassified (4) Structure (1 )
Archaea
Protein Name EC#OrganismGenBankUniprotPDB/3D
 Htur_2510   Haloterrigena turkmenica DSM 5511 ADB61387.1 D2RVV8  
Bacteria
Protein Name EC#OrganismGenBankUniprotPDB/3D
 AciX9_2068   Acidobacterium sp. MP5ACTX9 ADW69113.1    
 xylanase E (XynE)   Aeromonas caviae ME-1 BAA34091.1 Q9Z485  
 xylanase E (XynE)   Aeromonas caviae ME-1 BAA34091.1 Q9Z485  
 MADE_03943   Alteromonas macleodii 'Deep ecotype' ACG68233.1
AEB00075.1		 B4S137  
 ambt_21200   Alteromonas sp. SN2 AEF05731.1    
 ANT_28690   Anaerolinea thermophila UNI-1 BAJ64895.1    
 Bcell_0541   Bacillus cellulosilyticus DSM 2522 ADU28823.1 D2LWA8  
 BF638R_1893   Bacteroides fragilis 638R CBW22417.1 E1WV94  
 BF1924   Bacteroides fragilis NCTC 9343 CAH07622.1 Q5LE31  
 BF1858   Bacteroides fragilis YCH46 BAD48606.1    
 Bache_0507   Bacteroides helcogenes P 36-108 ATCC 35417 ADV42532.1    
 BVU_4051   Bacteroides vulgatus ATCC 8482 ABR41653.1 A6L7I9  
 Bcav_0914   Beutenbergia cavernae DSM 12333 ACQ79175.1 C5BZK3  
 Bcav_1252   Beutenbergia cavernae DSM 12333 ACQ79512.1 C5C1P4  
 Bcav_1252   Beutenbergia cavernae DSM 12333 ACQ79512.1 C5C1P4  
 Bfae_04810   Brachybacterium faecium DSM 4810 ACU84350.1 C7MHE1  
 CIY_22490   Butyrivibrio fibrisolvens 16/4 CBK74925.1 D4IVY2  
 bpr_I0026 (Xyn10B)   Butyrivibrio proteoclasticus B316 ADL32778.1 E0S2F5  
 bpr_I0026 (Xyn10B)   Butyrivibrio proteoclasticus B316 ADL32778.1 E0S2F5  
 Calhy_0074   Caldicellulosiruptor hydrothermalis 108 ADQ05836.1 E4Q9G5  
 Calkr_2245   Caldicellulosiruptor kristjanssonii 177R1B ADQ41707.1 E4S6E9  
 Calkr_2245   Caldicellulosiruptor kristjanssonii 177R1B ADQ41707.1 E4S6E9  
 Calkr_2245   Caldicellulosiruptor kristjanssonii 177R1B ADQ41707.1 E4S6E9  
 Calkro_0091   Caldicellulosiruptor kronotskyensis 2002 ADQ45007.1 E4SCF2  
 Calkro_0402   Caldicellulosiruptor kronotskyensis 2002 ADQ45302.1 E4SE15  
 Calkro_0402   Caldicellulosiruptor kronotskyensis 2002 ADQ45302.1 E4SE15  
 Calla_0206   Caldicellulosiruptor lactoaceticus 6A AEM72886.1    
 Calla_0206   Caldicellulosiruptor lactoaceticus 6A AEM72886.1    
 Calow_1924   Caldicellulosiruptor owensensis OL ADQ05453.1 E4Q5G9  
 Calow_1924   Caldicellulosiruptor owensensis OL ADQ05453.1 E4Q5G9  
 xylanase B (XynB)   Caldicellulosiruptor sp. Rt69B.1 AAB95325.1
CAA03086.1
CAE84530.1		 O52373  
 xylanase B (XynB)   Caldicellulosiruptor sp. Rt69B.1 AAB95325.1 O52373  
 Cabther_A1196   Candidatus Chloracidobacterium thermophilum B AEP11950.1    
 Ccan_22850   Capnocytophaga canimorsus Cc5 AEK24400.1    
 xylanase C (XynC;XylC)   Cellulomonas fimi ATCC 484 CAA90745.1 Q59278  
 xylanase C (XynC;XylC)   Cellulomonas fimi ATCC 484 CAA90745.1 Q59278  
 Celf_0574   Cellulomonas fimi ATCC 484 AEE44714.1    
 Celf_0574   Cellulomonas fimi ATCC 484 AEE44714.1    
 Cfla_0639   Cellulomonas flavigena DSM 20109 ADG73551.1 D5UIQ2  
 Cfla_0638   Cellulomonas flavigena DSM 20109 ADG73550.1 D5UIQ1  
 Celal_1435   Cellulophaga algicola DSM 14237 ADV48748.1    
 Celly_2335   Cellulophaga lytica DSM 7489 ADY30154.1    
 Celgi_2403   Cellvibrio gilvus ATCC 13127 AEI12902.1    
 Celgi_2403   Cellvibrio gilvus ATCC 13127 AEI12902.1    
 Cpin_0563   Chitinophaga pinensis DSM 2588 ACU58061.1 C7PH82  
 Cpin_4979   Chitinophaga pinensis DSM 2588 ACU62412.1 C7PPK2  
 Cpin_4979   Chitinophaga pinensis DSM 2588 ACU62412.1 C7PPK2  
 Ccel_0993   Clostridium cellulolyticum H10 ATCC 35319 ACL75355.1 B8I995  
 Ccel_3463   Clostridium cellulolyticum H10 ATCC 35319 ACL77751.1 B8I288  
 Ccel_2669   Clostridium cellulolyticum H10 ATCC 35319 ACL76991.1 B8I6Z9  
 Ccel_2320   Clostridium cellulolyticum H10 ATCC 35319 ACL76656.1 B8I5C0  
 Ccel_2319   Clostridium cellulolyticum H10 ATCC 35319 ACL76655.1 B8I5B9  
 Clocl_1543   Clostridium clariflavum DSM 19732 AEV68181.1    
 Clocl_1543   Clostridium clariflavum DSM 19732 AEV68181.1    
 Clocl_1543   Clostridium clariflavum DSM 19732 AEV68181.1    
 Clocl_2435   Clostridium clariflavum DSM 19732 AEV69010.1    
 Clocl_2435   Clostridium clariflavum DSM 19732 AEV69010.1    
 Clocl_2435   Clostridium clariflavum DSM 19732 AEV69010.1    
 Clocl_0282   Clostridium clariflavum DSM 19732 AEV67023.1    
 Clocl_2194   Clostridium clariflavum DSM 19732 AEV68786.1    
 Clocl_2194   Clostridium clariflavum DSM 19732 AEV68786.1    
 xylanase A (XynA) (Xyn10A)   Clostridium josui FERM P-9684 BAB20931.1 Q9F1V3  
 Clole_0518   Clostridium lentocellum DSM 5427 ADZ82256.1    
 Clo1100_2769   Clostridium sp. BNL1100 AEY66927.1    
 Clo1100_4082   Clostridium sp. BNL1100 AEY68182.1    
 Clo1100_2768   Clostridium sp. BNL1100 AEY66926.1    
 Clo1100_3348   Clostridium sp. BNL1100 AEY67493.1    
 xylanase C / β-1,3-1,4-glucanase (XynC) (Xyn10B)   Clostridium stercorarium BAA82143.1 Q9XDV5  
 celloxylanase (CelX;XynC) (Xyn10C)   Clostridium stercorarium NCIMB 11745 CAD48314.1 Q8GJ37  
 xylanase X (XynX)   Clostridium thermocellum ATCC 27405 AAA23227.1 P38535  
 xylanase X (XynX)   Clostridium thermocellum ATCC 27405 AAA23227.1 P38535  
 CPS_3694   Colwellia psychrerythraea 34H BAA-681 AAZ26785.1 Q47XV8  
 CPS_3715   Colwellia psychrerythraea 34H BAA-681 AAZ28305.1 Q47XT8  
 Cwoe_5445   Conexibacter woesei DSM 14684 ADB53850.1 D3EZL2  
 Cycma_1187   Cyclobacterium marinum DSM 745 AEL24959.1    
 Cycma_1475   Cyclobacterium marinum DSM 745 AEL25244.1    
 Cycma_2043   Cyclobacterium marinum DSM 745 AEL25790.1    
 Cycma_3923   Cyclobacterium marinum DSM 745 AEL27632.1    
 Cycma_4274   Cyclobacterium marinum DSM 745 AEL27977.1    
 Cycma_2521   Cyclobacterium marinum DSM 745 AEL26260.1    
 Cycma_4443   Cyclobacterium marinum DSM 745 AEL28145.1    
 CHU_1221   Cytophaga hutchinsonii ATCC 33406 ABG58494.1 Q11VS2  
 CHU_1238   Cytophaga hutchinsonii ATCC 33406 ABG58510.1 Q11VQ6  
 CHU_1240   Cytophaga hutchinsonii ATCC 33406 ABG58512.1 Q11VQ4  
 CHU_3727   Cytophaga hutchinsonii ATCC 33406 ABG60960.1 Q11NQ3  
 CHU_2040   Cytophaga hutchinsonii ATCC 33406 ABG59303.1 Q11TG1  
 CHU_2041   Cytophaga hutchinsonii ATCC 33406 ABG59304.1 Q11TG0  
 CHU_2042   Cytophaga hutchinsonii ATCC 33406 ABG59305.1 Q11TF9  
 CHU_2043   Cytophaga hutchinsonii ATCC 33406 ABG59306.1 Q11TF8  
 CHU_2044   Cytophaga hutchinsonii ATCC 33406 ABG59307.1 Q11TF7  
 CHU_2379   Cytophaga hutchinsonii ATCC 33406 ABG59637.1 Q11SH7  
 DICTH_0479   Dictyoglomus thermophilum H-6-12 ATCC 35947 ACI19612.1 B5YCV3  
 Dtur_0643   Dictyoglomus turgidum DSM 6724 ACK41928.1 B8DZJ5  
 xylanase (Dtur_1715)   Dictyoglomus turgidum DSM 6724 ACK42987.1 B8E3B3  
 xylanase (Dtur_1715)   Dictyoglomus turgidum DSM 6724 ACK42987.1 B8E3B3  
 Dtur_0374   Dictyoglomus turgidum DSM 6724 ACK41678.1 B8DZ52  
 Dfer_4864   Dyadobacter fermentans DSM 18053 ACT96065.1 C6W5X6  
 xylanase   Eubacterium ruminantium BAA09971.1 Q47871  
 FB2170_01417   Flavobacteriales bacterium HTCC2170 EAQ99991.1 A4AVR1  
 FB2170_11461   Flavobacteriales bacterium HTCC2170 EAR01335.1 A4ARW2  
 Fjoh_2035   Flavobacterium johnsoniae UW101 ABQ05066.1 A5FIA0  
 Fjoh_2869   Flavobacterium johnsoniae UW101 ABQ05890.1 A5FFX3  
 Glaag_0965   Glaciecola agarilytica 4H-3-7+YE-5 AEE21926.1    
 GNIT_1526   Glaciecola nitratireducens FR1064 AEP29644.1    
 Hoch_0364   Haliangium ochraceum DSM 14365 ACY13005.1 D0LIX6  
 Halhy_1932   Haliscomenobacter hydrossis DSM 1100 AEE49817.1    
 Intca_1418   Intrasporangium calvum DSM 43043 ADU47934.1    
 Isop_2355   Isosphaera pallida ATCC 43644 ADV62932.1    
 Jden_1648   Jonesia denitrificans DSM 20603 ACV09296.1 C7R5M3  
 Kfla_6046   Kribbella flavida DSM 17836 ADB35049.1 D2PSZ7  
 Kfla_0439   Kribbella flavida DSM 17836 ADB29562.1 D2PUP4  
 Krodi_2693   Krokinobacter diaphorus 4H-3-7-5 AEE20669.1    
 Mahau_2088   Mahella australiensis 50-1 BON AEE97260.1    
 MTES_1035   Microbacterium testaceum StLB037 BAJ73999.1    
 Micau_3790   Micromonospora aurantiaca ATCC 27029 ADL47314.1 D9T078  
 ML5_4626   Micromonospora sp. L5 ADU10102.1 D3C4R1  
 Murru_0937   Muricauda ruestringensis DSM 13258 AEM69984.1    
 LILAB_20800   Myxococcus fulvus HW-1 AEI66060.1    
 MXAN_2624   Myxococcus xanthus DK 1622 ABF91795.1 Q1D930  
 Niako_1654   Niastella koreensis GR20-10 AEV98021.1    
 Niako_1654   Niastella koreensis GR20-10 AEV98021.1    
 Niako_5907   Niastella koreensis GR20-10 AEW02137.1    
 Oter_1101   Opitutus terrae PB90-1 ACB74389.1 B1ZNF5  
 xylanase C (XynC;X-K)   Paenibacillus barcinonensis BP-23 CAA07173.1 O69230  
 xylanase C (XynC;X-K)   Paenibacillus barcinonensis BP-23 CAA07173.1 O69230  
 xylanase 10A (Xyn10A)   Paenibacillus curdlanolyticus B-6 ABZ80916.1 B1A3N2  
 KNP414_00310   Paenibacillus mucilaginosus KNP414 AEI38935.1    
 KNP414_04340   Paenibacillus mucilaginosus KNP414 AEI42872.1    
 KNP414_04346   Paenibacillus mucilaginosus KNP414 AEI42878.1    
 KNP414_04346   Paenibacillus mucilaginosus KNP414 AEI42878.1    
 KNP414_00305   Paenibacillus mucilaginosus KNP414 AEI38930.1    
 KNP414_01749   Paenibacillus mucilaginosus KNP414 AEI40311.1    
 KNP414_04567   Paenibacillus mucilaginosus KNP414 AEI43097.1    
 Pjdr2_4255   Paenibacillus sp. JDR-2 ACT02879.1 C6D776  
 Pjdr2_4255   Paenibacillus sp. JDR-2 ACT02879.1 C6D776  
 Pjdr2_1488   Paenibacillus sp. JDR-2 ACT00163.1 C6CWU9  
 methylglucuronoxylan xylanase A (XynA1;XynA;Pjdr2_0221)   Paenibacillus sp. JDR-2 ACS98901.1
CAI79477.1		 Q53I45  
 xylanase 5 (Xyn5)   Paenibacillus sp. W-61 BAC45001.1 Q8GHJ4  
 GYMC10_6048   Paenibacillus sp. Y412MC10 ACX68253.1 D3EGA3  
 GYMC10_0901   Paenibacillus sp. Y412MC10 ACX63201.1 D3EE78  
 GYMC10_0901   Paenibacillus sp. Y412MC10 ACX63201.1 D3EE78  
 BDI_2286   Parabacteroides distasonis ATCC 8503 ABR44012.1 A6LE98  
 Pmob_0231   Petrotoga mobilis SJ95 ABX30975.1 A9BJ30  
 Pmob_0231   Petrotoga mobilis SJ95 ABX30975.1 A9BJ30  
 PBPRB0151   Photobacterium profundum SS9 CAG22024.1    
 Patl_3388   Pseudoalteromonas atlantica T6c ABG41894.1 Q15QE4  
 PSM_A0185   Pseudoalteromonas sp. SM9913 ADT67142.1    
 RB10165   Rhodopirellula baltica SH 1 CAD78738.1    
 Rmar_2792   Rhodothermus marinus DSM 4252 ACY49661.1 D0MH72  
 Rhom172_2806   Rhodothermus marinus SG0.5JP17-172 AEN74689.1    
 RO1_31190   Roseburia intestinalis XB6B4 CBL13458.1 D4L1G8  
 RO1_31190   Roseburia intestinalis XB6B4 CBL13458.1 D4L1G8  
 Runsl_2498   Runella slithyformis DSM 19594 AEI48902.1    
 Runsl_4749   Runella slithyformis DSM 19594 AEI51067.1    
 Runsl_5335   Runella slithyformis DSM 19594 AEI51628.1    
 SACE_3337   Saccharopolyspora erythraea NRRL 2338 CAM02612.1 A4FEY7  
 SRU_0370   Salinibacter ruber DSM 13855 M31 ABC44432.1 Q2S5L5  
 SRM_00447   Salinibacter ruber M8 CBH23368.1    
 Sfri_3136   Shewanella frigidimarina NCIMB 400 ABI72973.1 Q07YE1  
 swp_4294   Shewanella piezotolerans WP3 ACJ30945.1 B8CU89  
 Acid_2798   Solibacter usitatus Ellin6076 ABJ83784.1 Q023Q6  
 Acid_2876   Solibacter usitatus Ellin6076 ABJ83862.1 Q023I4  
 sce8541   Sorangium cellulosum 'So ce 56' CAN98711.1 A9FZ52  
 Slin_5503   Spirosoma linguale DSM 74 ADB41469.1 D2QG06  
 Slin_3963   Spirosoma linguale DSM 74 ADB39953.1 D2QIM7  
 STAUR_3356   Stigmatella aurantiaca DW4/3-1 ADO71148.1 E3FYM3  
 TERTU_1900   Teredinibacter turnerae T7901 ACR13983.1 C5BI07  
 AciPR4_4195   Terriglobus saanensis SP1PR4 ADV84940.1 E1N1E0  
 Thit_0192   Thermoanaerobacter italicus Ab9 ADD01520.1 D3T5Y9  
 Thit_0192   Thermoanaerobacter italicus Ab9 ADD01520.1 D3T5Y9  
 Tmath_0251   Thermoanaerobacter mathranii subsp. mathranii str. A3 ADH60034.1 D7ARC5  
 Tmath_0251   Thermoanaerobacter mathranii subsp. mathranii str. A3 ADH60034.1 D7ARC5  
 xylanase A (XynA)   Thermoanaerobacterium saccharolyticum B6A-RI AAA21812.1 P36917.1  
 xylanase A (XynA)   Thermoanaerobacterium saccharolyticum B6A-RI AAA21812.1 P36917.1  
 xylanase (XynA)   Thermoanaerobacterium sp. 'JW/SL YS485' AAC43719.1 Q60043  
 xylanase (XynA)   Thermoanaerobacterium sp. 'JW/SL YS485' AAC43719.1 Q60043  
 xylanase (XynA) (salt-tolerant)   Thermoanaerobacterium sp. NTOU2 ADB23440.1    
 xylanase (XynA) (salt-tolerant)   Thermoanaerobacterium sp. NTOU2 ADB23440.1    
 Tthe_0992   Thermoanaerobacterium thermosaccharolyticum DSM 571 ADL68522.1 D9TMZ9  
 Tthe_0992   Thermoanaerobacterium thermosaccharolyticum DSM 571 ADL68522.1 D9TMZ9  
 xylanase A (XynA)   Thermoanaerobacterium thermosulfurigenes EM1 AAB08046.1 Q60046  
 xylanase A (XynA)   Thermoanaerobacterium thermosulfurigenes EM1 AAB08046.1 Q60046  
 Thexy_1730   Thermoanaerobacterium xylanolyticum LX-11 AEF17757.1    
 Thexy_1730   Thermoanaerobacterium xylanolyticum LX-11 AEF17757.1    
 Tter_2529   Thermobaculum terrenum ATCC BAA-798 ACZ43418.1 D1CI47  
 Tter_2109   Thermobaculum terrenum ATCC BAA-798 ACZ43011.1 D1CGZ0  
 xylanase A (XynA;Tm0061) (Xyl10A)   Thermotoga maritima MSB8 AAD35155.1
CAA86406.1
NP_227877.1		 Q60037 1I82[A]
1I8A[A]
1I8U[A]
 xylanase A (XynA;Tm0061) (Xyl10A)   Thermotoga maritima MSB8 AAD35155.1
CAA86406.1
NP_227877.1		 Q60037  
 Tnap_0691   Thermotoga naphthophila RKU-10 ADA66786.1 D2C750  
 Tnap_0691   Thermotoga naphthophila RKU-10 ADA66786.1 D2C750  
 CTN_1302   Thermotoga neapolitana DSM 4359 ACM23478.1 B9K945  
 CTN_1302   Thermotoga neapolitana DSM 4359 ACM23478.1 B9K945  
 xylanase A (XynA;CTN_0632)   Thermotoga neapolitana DSM 4359 ACM22808.1
CAA87069.1		 B9K775
Q60042		  
 xylanase A (XynA;CTN_0632)   Thermotoga neapolitana DSM 4359 ACM22808.1
CAA87069.1		 B9K775
Q60042		  
 Tpet_0863   Thermotoga petrophila RKU-1 ABQ46882.1 A5IL09  
 Tpet_0863   Thermotoga petrophila RKU-1 ABQ46882.1 A5IL09  
 TRQ2_0885   Thermotoga sp. RQ2 ACB09237.1 B1LA89  
 TRQ2_0885   Thermotoga sp. RQ2 ACB09237.1 B1LA89  
 TRQ2_1549   Thermotoga sp. RQ2 ACB09885.1 B1LC77  
 TRQ2_1549   Thermotoga sp. RQ2 ACB09885.1 B1LC77  
 xylanase B (XynB)   Thermotoga sp. strain FjSS3-B.1 AAD32593.1
AAD32593.2		 Q9R6T4  
 xylanase B (XynB)   Thermotoga sp. strain FjSS3-B.1 AAD32593.1
AAD32593.2		 Q9R6T4  
 xylanase C (XynC)   Thermotoga sp. strain FjSS3-B.1 AAD32594.1 Q9WWJ9  
 xylanase C (XynC)   Thermotoga sp. strain FjSS3-B.1 AAD32594.1 Q9WWJ9  
 Theth_1635   Thermotoga thermarum DSM 5069 AEH51685.1    
 Theth_1635   Thermotoga thermarum DSM 5069 AEH51685.1    
 Kole_1178   Thermotogales bacterium TBF 19.5.1 ACR79878.1 C5CIL6  
 Kole_0690   Thermotogales bacterium TBF 19.5.1 ACR79406.1 C5CFI8  
 TREAZ_2741   Treponema azotonutricium ZAS-9 AEF80243.1    
 TREPR_1441   Treponema primitia ZAS-2 AEF84778.1    
 Chi12   uncultured bacterium BAF02568.1 Q0WY12  
 VAB18032_09100   Verrucosispora maris AB-18-032 AEB42938.1    
 VAB18032_18365   Verrucosispora maris AB-18-032 AEB44775.1    
 VV0542   Vibrio vulnificus YJ016 BAC93306.1
NP_933335.1		 Q7MP22  
 xylanase (Xyn10B)   Xylanimicrobium pachnodae AAD54768.1 Q9RQB7  
 Xcel_2684   Xylanimonas cellulosilytica DSM 15894 ACZ31698.1 D1BXQ7  
 Xcel_2683   Xylanimonas cellulosilytica DSM 15894 ACZ31697.1 D1BXQ6  
 ZPR_4181   Zunongwangia profunda SM-A87 SMA-87 ADF54484.1 D5BAF8  
Eukaryota
Protein Name EC#OrganismGenBankUniprotPDB/3D
 ALNC14_052840 (Alnc14c64g4589)   Albugo laibachii Nc14 CCA19141.1    
unclassified
Protein Name EC#OrganismGenBankUniprotPDB/3D
 SARM_0028 / 459624_17850 / TW-37   uncultured organism ADX05699.1    
 Sequence 52 from patent US 7504120.   unidentified ACP87302.1
ACW01930.1		    
 Sequence 52 from patent US 7504120.   unidentified ACP87302.1
ACW01930.1		    
 Sequence 374 from patent US 7504120.   unidentified ACP87463.1
ACW02091.1		    




Last update: 2012-01-31 © Copyright 1998-2012
AFMB - CNRS - Universités Aix-Marseille I & II