Carbohydrate-Binding Module Family 6

Activities in FamilyModules of approx. 120 residues. The cellulose-binding function has been demonstrated in one case on amorphous cellulose and β-1,4-xylan. Some of these modules also bind β-1,3-glucan, β-1,3-1,4-glucan, and β-1,4-glucan.
3D Structure Statusβ-sandwich
NotePreviously known as cellulose-binding domain family VI (CBD VI).
External resourcesCAZypedia; PROSITE;
Commercial Enzyme Provider(s)NZYTech; PROZOMIX;
Statistics GenBank accession (1922); Uniprot accession (401); PDB accession (35); 3D entries (10); cryst (0)
All (2108) Archaea (74) Bacteria (2004) Eukaryota (14) unclassified (16) Structure (10) Characterized (101)
| 1 | 2 |
Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 AcGH5 / AceceDRAFT_1592 3.2.1.- Acetivibrio cellulolyticus CD2 EFL62381.1 E1KC96  
 α-agarase (AgaA) 3.2.1.158 Alteromonas agarilytica GJ1B AAF26838.1 Q9LAP7  
 α-agarase (AgaA) 3.2.1.158 Alteromonas agarilytica GJ1B AAF26838.1 Q9LAP7  
 α-agarase (AgaA) 3.2.1.158 Alteromonas agarilytica GJ1B AAF26838.1 Q9LAP7  
 endo-α-1,6-mannanase (Aman6) 3.2.1.101 Bacillus circulans TN31 / TN-31 BAA75632.1 Q9Z4P9  
 β-1,3-glucanase / laminarinase (BhGH81;BH0236) 3.2.1.39 Bacillus halodurans C-125 BAB03955.1
NP_241102.1
Q9KG76 1W9S[A,B]
1W9T[A,B]
1W9W[A]
 arabinoxylan α-arabinofuranosidase / AXH-m23 (XynD) (Arf43A=Axh43A) 3.2.1.55 Bacillus licheniformis SVD1 BAL45491.1    
 arabinoxylan arabinofuranohydrolase (AXH) (Axh43A) 3.2.1.55 Bacillus sp. BP-7 AKF02745.1    
 arabinoxylan α-L-1,3-arabinofuranohydrolase (XynD;BsAXH-m23;BSU18160) 3.2.1.55 Bacillus subtilis subsp. subtilis str. 168 CAB13699.1
AIY93126.1
AQR81807.1
AQR86021.1
CAA97613.1
NP_389698.1
Q45071 3C7E[A]
3C7F[A]
3C7G[A]
3C7H[A]
3C7O[A]
 β-xylosidase / α-L-arabinofuranosidase (XynF) 3.2.1.37
3.2.1.55
Caldicellulosiruptor saccharolyticus AAB87371.1 O30426  
 bifunctional α-L-arabinofuranosidase (XynF;Csac_2411) 3.2.1.55 Caldicellulosiruptor saccharolyticus DSM 8903 ABP67988.1 A4XM53  
 xylanase C (XynC) (multidomain protein) 3.2.1.8 Caldicellulosiruptor sp. Rt69B.1 AAB95326.1 O52374  
 bifunctional β-1,4-xylanase / α-L-arabinosidase (XynA) 3.2.1.55
3.2.1.8
Caldicellulosiruptor sp. Tok7B.1 AAD30363.1 Q9X3P5  
 β-xylosidase (CGSCsYakCAS_10615) (fragment) (Xyn43A) 3.2.1.- Cellulosilyticum ruminicola CGMCC 1.5065 ACZ98594.1 D2KFJ2  
 [N-glycan] (Man-1-Pi-6-Man-specific) uncapping α-mannosidase (CcGH92_5;CcMan5) 3.2.1.- Cellulosimicrobium cellulans AFK83609.1    
 [N-glycan] (Man-1-Pi-6-Man-specific) uncapping α-mannosidase (CcGH92_5;CcMan5) 3.2.1.- Cellulosimicrobium cellulans AFK83609.1    
 [N-glycan] (Man-1-Pi-6-Man-specific) uncapping α-mannosidase (CcGH92_5;CcMan5) 3.2.1.- Cellulosimicrobium cellulans AFK83609.1    
 endo-β-1,4-glucanase B (CelB) (Cel5A;Cel5B) 3.2.1.4 Cellvibrio mixtus ATCC 12120 AAB61462.2 O07653 1UXZ[A,B]
1UY0[A,B]
1UYX[A,B]
1UYY[A,B]
1UYZ[A,B]
1UZ0[A]
 endo-β-1,4-glucanase B (CelB) (Cel5A;Cel5B) 3.2.1.4 Cellvibrio mixtus ATCC 12120 AAB61462.2 O07653  
 α-galactosidase (Ccel_1237) (Gal27A) 3.2.1.22 [Clostridium] cellulolyticum H10 ACL75593.1
ABG76969.1
B8I0L8  
 β-galactosidase (Gal59A;Ccel_1238) (Gal59A) 3.2.1.23 [Clostridium] cellulolyticum H10 ABG76970.1
ACL75594.1
Q0PRN1 2V4V[A]
 endo-β-1,4-xylanase (C7I;CpC7I;CpXyn30A;Cpap_2855) (Xyn30A) 3.2.1.8 Clostridium papyrosolvens DSM 2782 EGD48159.1    
 xylanase (XynA;XylA) 3.2.1.8 Clostridium stercorarium F-9 BAA02584.1
AAR39822.1
AAS31751.1
P33558  
 xylanase (XynA;XylA) 3.2.1.8 Clostridium stercorarium F-9 BAA02584.1
AAR39822.1
AAS31751.1
P33558  
 xylanase A (XynA) (Xyn11A) 3.2.1.8 Clostridium stercorarium NCIMB 11754 CAD48307.1
AAL14106.1
Q8GJ44
Q93AQ5
1UY1[A]
1UY2[A]
1UY3[A]
1UY4[A]
 xylanase A (XynA) (Xyn11A) 3.2.1.8 Clostridium stercorarium NCIMB 11754 CAD48307.1
AAL14106.1
Q8GJ44
Q93AQ5
 
 xylanase A (XynA) (Xyn11A) 3.2.1.8 Clostridium stercorarium NCIMB 11754 CAD48307.1
AAL14106.1
Q8GJ44
Q93AQ5
1NAE[A]
1O8P[A]
1O8S[A]
1OD3[A]
 arabinoxylan α-L-arabinofuranosidase (Axh1;Fisuc_1769;FSU_2269) 3.2.1.55 Fibrobacter succinogenes subsp. succinogenes S85 ACX75362.1
ADL24843.1
C9RS26  
 acetyl xylan esterase B (AxeB;Fisuc_1767;FSU_2267) (Axe6B) 3.1.1.72 Fibrobacter succinogenes subsp. succinogenes S85 ACX75360.1
ADL27361.1
C9RS24  
 xylanase E (XynE;Xyn10M;Fisuc_1793;FSU_2293) (Xyn10E) 3.2.1.8 Fibrobacter succinogenes subsp. succinogenes S85 AAG36765.1
AAG02561.1
ACX75386.1
ADL27036.1
Q9F108  
 xylanase D (XynD;Xyn10L;Fisuc_1791;FSU_2292) (Xyn10D) 3.2.1.8 Fibrobacter succinogenes subsp. succinogenes S85 AAG02560.1
AAG36764.1
ACX75384.1
ADL26381.1
Q9F4L0  
 acetyl xylan esterase A (AxeA;Fisuc_1766;FSU_2266) (Axe6A) 3.1.1.72 Fibrobacter succinogenes subsp. succinogenes S85 AAG36766.1
ACX75359.1
ADL25018.1
Q9F106  
 xylanase B (XynB;Fisuc_1794;FSU_2294) (Xyn10B) 3.2.1.8 Fibrobacter succinogenes subsp. succinogenes S85 ACX75387.1
AAG36763.1
ADL25544.1
C9RS51
Q9F107
 
 β-agarase (Aga4383) 3.2.1.81 Flammeovirga pacifica WPAGA1 AIA22721.1
ART27998.1
   
 β-agarase (AgaB) 3.2.1.81 Flammeovirga sp. SJP92 ANN44251.1    
 β-agarase (AgaB) 3.2.1.81 Flammeovirga sp. SJP92 ANN44251.1    
 endoglucanase (Cel5;HCH_03914) 3.2.1.4 Hahella chejuensis KCTC 2396 ABC30636.1 Q2SFD8  
 endoglucanase (Cel5;HCH_03914) 3.2.1.4 Hahella chejuensis KCTC 2396 ABC30636.1 Q2SFD8  
 β-1,3-glucanase C (GluC) 3.2.1.39 Lysobacter enzymogenes N4-7 AAN77505.1 Q8GCZ5  
 agarase (AgaA3) 3.2.1.81 Microbulbifer agarilyticus JAMB-A3 BAE06228.1 Q4LFA5  
 agarase (AgaA3) 3.2.1.81 Microbulbifer agarilyticus JAMB-A3 BAE06228.1 Q4LFA5  
 β-agarase (AgaA7) 3.2.1.81 Microbulbifer elongatus JAMB-A7 BAC99022.1 Q76DQ8  
 β-agarase (AgaA;MtAgaA) 3.2.1.81 Microbulbifer thermotolerans JAMB-A94 BAD29947.1
BAK08910.1
Q6F4N4  
 β-agarase (AgaO) 3.2.1.81 Microbulbifer thermotolerans JAMB-A94 BAD86832.1
BAK08903.1
Q5KTI5  
 β-agarase (AgaO) 3.2.1.81 Microbulbifer thermotolerans JAMB-A94 BAD86832.1
BAK08903.1
Q5KTI5  
 isoprimeverose-producing oligoxyloglucan hydrolase (IPase) 3.2.1.120 Oerskovia sp. Y1 BAM08953.1    
 α-L-arabinofuranosidase 43A (XynD) (formerly xylanase D) (Xyn43A) 3.2.1.55 Paenibacillus polymyxa ATCC 842 CAA40378.1 P45796  
 chitinase 3.2.1.14 Pseudomonas sp. BK1 AAP79427.1 Q6X934  
 β-agarase 3.2.1.81 Pseudomonas sp. ND137 BAD88713.1 Q5H756  
 β-agarase 3.2.1.81 Pseudomonas sp. ND137 BAD88713.1 Q5H756  
 chitinase (PchA) 3.2.1.14 Pseudomonas sp. PE2 BAB79259.1 Q8VUU6  
 β-1,3(4)-glucanase A (GluA) 3.2.1.6 Pseudomonas sp. PE2 BAC16332.1 Q8GRB4  
 β-1,3(4)-glucanase A (GluA) 3.2.1.6 Pseudomonas sp. PE2 BAC16332.1 Q8GRB4  
 xylanase Z / feruloyl esterase (XynZ;LX3;CtGH10) 3.1.1.73
3.2.1.8
Ruminiclostridium thermocellum AAA23286.1
AAR39815.1
P10478  
 α-L-arabinofuranosidase (Ct43Araf;CtAbf43A;CtGh43;Cthe_1271) (Abf43A) 3.2.1.55 Ruminiclostridium thermocellum ATCC 27405 ABN52503.1 A3DEX4  
 α-L-arabinofuranosidase (Ct43Araf;CtAbf43A;CtGh43;Cthe_1271) (Abf43A) 3.2.1.55 Ruminiclostridium thermocellum ATCC 27405 ABN52503.1 A3DEX4  
 xylanase Z / feruloyl esterase (XynZ;Cthe_1963;E-FAERU) (Xyn10Z) 3.1.1.73
3.2.1.8
Ruminiclostridium thermocellum ATCC 27405 ABN53181.1 P10478  
 xylanase (M6;CtM6;CtXyl5A;Cthe_2193) (arabinoxylan-specific) (Xyl5A) 3.2.1.- Ruminiclostridium thermocellum ATCC 27405 ABN53395.1 A3DHG6 2Y8K[A]
5AK1[A]
5G56[A]
5LA0[A]
5LA1[A]
5LA2[A,B]
 xylanase E (XynE; Cthe_2195) 3.2.1.8 Ruminiclostridium thermocellum ATCC 27405 ABN53397.1 A3DHG8  
 acetylxylan esterase (XynA/U;Cthe_2972) (Xyn11A) 3.1.1.72 Ruminiclostridium thermocellum ATCC 27405 ABN54169.1 A3DJP0  
 xylanase A or U / acetylxylan esterase (XynA;XynU;CtCE4;LX4) (Xyn11A) 3.1.1.72
3.2.1.8
Ruminiclostridium thermocellum F1 / YS AAC04579.1
BAA33543.1
O52780
O87119
1GMM[A]
1UXX[X]
 xylanase B or V (XynB;XynV) 3.2.1.8 Ruminiclostridium thermocellum F1 / YS AAC04578.1
BAA33542.1
O52779
O87118
 
 bifunctional xylanase α-L-arabinofuranosidase (GH10B;GH43E;RUM_15940) (Xyn10B-Abf43E) 3.2.1.55
3.2.1.8
Ruminococcus champanellensis 18P13 = JCM 17042 CBL17682.1 D4LDI7  
 endo-β-agarase I / B (AgaB;Sde_1175) (Aga16B) 3.2.1.81 Saccharophagus degradans 2-40 ABD80437.1
AAT67062.1
Q21LJ2 2CDO[A,B,C,D]
2CDP[A,B,C,D]
 endo-β-agarase I / B (AgaB;Sde_1175) (Aga16B) 3.2.1.81 Saccharophagus degradans 2-40 ABD80437.1
AAT67062.1
Q21LJ2  
 endo-β-1,4-glucanase 5B (Sde_2490) (Cel5B) 3.2.1.4 Saccharophagus degradans 2-40 ABD81750.1 Q21HS9  
 endo-β-1,4-glucanase 5J (Sde_2494) (processive) (Cel5J) 3.2.1.4 Saccharophagus degradans 2-40 ABD81754.1 Q21HS5  
 endo-β-1,4-glucanase 5J (Sde_2494) (processive) (Cel5J) 3.2.1.4 Saccharophagus degradans 2-40 ABD81754.1 Q21HS5  
 β-agarase II / E (AgaE;Sde_2655) (Aga86E) 3.2.1.81 Saccharophagus degradans 2-40 ABD81915.1 Q21HB4  
 β-agarase II / E (AgaE;Sde_2655) (Aga86E) 3.2.1.81 Saccharophagus degradans 2-40 ABD81915.1 Q21HB4  
 β-agarase II / E (AgaE;Sde_2655) (Aga86E) 3.2.1.81 Saccharophagus degradans 2-40 ABD81915.1 Q21HB4  
 endo-β-1,4-glucanase 5E (Sde_2929) (Cel5E) 3.2.1.4 Saccharophagus degradans 2-40 ABD82186.1 Q21GJ3  
 endo-β-1,4-glucanase 5E (Sde_2929) (Cel5E) 3.2.1.4 Saccharophagus degradans 2-40 ABD82186.1 Q21GJ3  
 β-1,3-1,6-endoglucanase (Sde_3023) (Gly5M) 3.2.1.39
3.2.1.75
Saccharophagus degradans 2-40 ABD82280.1 Q21G99  
 endo-β-1,4-glucanase 5H (Sde_3237) (processive) (Cel5H) 3.2.1.4 Saccharophagus degradans 2-40 ABD82494.1 Q21FN5  
 endo-β-1,4-glucanase 5G (Sde_3239) (processive) (Cel5G) 3.2.1.4 Saccharophagus degradans 2-40 ABD82496.1 Q21FN3  
 β-agarase I (Agy1;AgaY1) 3.2.1.81 Saccharophagus sp. AG21 AFR90184.1    
 β-agarase I (Agy1;AgaY1) 3.2.1.81 Saccharophagus sp. AG21 AFR90184.1    
 cellulase (CelMytB) 3.2.1.4 Saccharophagus sp. Myt-1 BAM21527.1    
 endo-β-1,3-glucanase (Curd1;Curd2;Curd3) 3.2.1.39 Streptomyces sioyaensis AAF31438.1 Q9L816  
 α-agarase (AgaA33) 3.2.1.158 Thalassotalea agarivorans JAMB A33 BAF44076.1 A1IGV8  
 α-agarase (AgaA33) 3.2.1.158 Thalassotalea agarivorans JAMB A33 BAF44076.1 A1IGV8  
 α-agarase (AgaA33) 3.2.1.158 Thalassotalea agarivorans JAMB A33 BAF44076.1 A1IGV8  
 cellodextrinase D (BglA;Ggh-A) 3.2.1.74 Thermobispora bispora NRRL 15568 AAB36835.1 Q59506  
 β-agarase (AguF) 3.2.1.81 uncultured bacterium AAP49324.1 Q6XRA2  
 β-agarase (AguF) 3.2.1.81 uncultured bacterium AAP49324.1 Q6XRA2  
 β-agarase I (AguB;AguD;AguK;AguH) 3.2.1.81 uncultured bacterium AAP49346.1
AAP49316.1
AAP70365.1
AAP70390.1
Q6XR80  
 xylanase (Xyl1;XYL1G3-ORF22) 3.2.1.8 uncultured bacterium AEV59726.1    
 endo-β-1,4-xylanase (UX66;Orf66) 3.2.1.8 uncultured bacterium URE4 ACM91046.1 C0K016  
 endo-β-1,4-xylanase (UX66;Orf66) 3.2.1.8 uncultured bacterium URE4 ACM91046.1 C0K016  
 β-agarase A (AgaA) 3.2.1.81 Vibrio sp. PO-303 BAF62129.1 A5A6R7  
 β-agarase A (AgaA) 3.2.1.81 Vibrio sp. PO-303 BAF62129.1 A5A6R7  
 β-agarase A (AgaA) 3.2.1.81 Vibrio sp. PO-303 BAF62129.1 A5A6R7  
 laminarinase (LamC;ZgLamC;ZgLamCGH16;zobellia_1010) 3.2.1.39 Zobellia galactanivorans DsiJT CAZ95067.1   4CRR[A]
5FUI[A]
Eukaryota
Protein Name EC#OrganismGenBank UniprotPDB/3D
 α-L-arabinofuranosidase 3 / β-xylosidase (Abf3) 3.2.1.37
3.2.1.55
Talaromyces purpureogenus MYA-38 ACP50519.2
ACP50519.1
C3W4Y2  
unclassified
Protein Name EC#OrganismGenBank UniprotPDB/3D
 endo-β-1,3(4)-glucanase (G05-27) 3.2.1.73 uncultured organism ACY24738.1 D8VMV4  
 multimodular xylanase (fragment) 3.2.1.- uncultured organism ADD61461.1 D9ZDQ7  
 SARM_0045 / 1029836_109780 / TW-25 3.2.1.8 uncultured organism ADX05716.1    
 SARM_0037 / 797777_44300 / TW-5 3.2.1.8 uncultured organism ADX05708.1    
 SARM_0037 / 797777_44300 / TW-5 3.2.1.8 uncultured organism ADX05708.1    
Top


Last update: 2017-12-01 © Copyright 1998-2017
AFMB - CNRS - Université d'Aix-Marseille