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Carbohydrate-Binding Module Family 51

Known ActivitiesModules of approx. 150 residues found attached to various enzymes from families GH2, GH27, GH31, GH95, GH98 and GH101 . Binding to galactose and to blood group A/B-antigens demonstrated in the case of C. perfringens GH95CBM51 and GH98CBM51 respectively [Gregg KJ et al. (2008) J. Biol. Chem. 283:12604-13 PMID: 18292090].
3D Structure Statusβ-sandwich
NoteAlso know as NPCBM domains
External resourcesInterPro; PFAM;
Statistics GenBank accession (135); Uniprot accession (73); PDB accession (8); 3D entries (3); cryst (0)
Summary
All (143) Bacteria (142) unclassified (1) Structure (3 )
Bacteria
Protein Name EC#OrganismGenBankUniprotPDB/3D
 ACPL_7012 (Bga7)   Actinoplanes sp. SE50/110 AEV87892.1    
 Amir_1044   Actinosynnema mirum DSM 43827 ACU35000.1 C6WNT1  
 Amir_4634   Actinosynnema mirum DSM 43827 ACU38466.1 C6WMV3  
 Amuc_1438   Akkermansia muciniphila ATCC BAA-835 ACD05260.1    
 Amuc_0480   Akkermansia muciniphila ATCC BAA-835 ACD04318.1 B2UNU8  
 RAM_18540   Amycolatopsis mediterranei S699 AEK42194.1    
 RAM_22345   Amycolatopsis mediterranei S699 AEK42949.1    
 RAM_04355   Amycolatopsis mediterranei S699 AEK39363.1    
 AMED_0853 (GalA)   Amycolatopsis mediterranei U32 ADJ42673.1 D8I272  
 AMED_3645 (GalA)   Amycolatopsis mediterranei U32 ADJ45428.1 D8I8U0  
 AMED_4388   Amycolatopsis mediterranei U32 ADJ46159.1 D8HTL5  
 AAur_4183   Arthrobacter aurescens TC1 ABM09092.1 A1RC87  
 core 1 endo-α-N-acetylgalactosaminidase (EngAA;AAur_1465)   Arthrobacter aurescens TC1 ABM10140.1 A1R4S7  
 core 1 endo-α-N-acetylgalactosaminidase (EngAA;AAur_1465)   Arthrobacter aurescens TC1 ABM10140.1 A1R4S7  
 Astex_3319   Asticcacaulis excentricus CB 48 CS 48 ADU14953.1 C5SLI3  
 BCAH187_A3211   Bacillus cereus AH187 ACJ82385.1 B7HWT2  
 BCN_3009   Bacillus cereus NC7401 BAL18802.1    
 BCQ_2995   Bacillus cereus Q1 ACM13423.1 B9IRD8  
 YBT020_15770   Bacillus thuringiensis serovar finitimus YBT-020 ADY22384.1    
 BT3592   Bacteroides thetaiotaomicron VPI-5482 AAO78697.1
NP_812503.1		    
 BBPR_1300   Bifidobacterium bifidum PRL2010 ADP36352.1 E4NXV4  
 BBIF_1257   Bifidobacterium bifidum S17 ADO53462.1 E3EN28  
 BurJV3_3861   Burkholderia sp. JV3 AEM53173.1    
 Caci_3712   Catenulispora acidiphila DSM 44928 ACU72614.1 C7QBZ5  
 Caci_5007   Catenulispora acidiphila DSM 44928 ACU73867.1 C7Q3D1  
 Cseg_2011   Caulobacter segnis ATCC 21756 ADG10480.1 D5VGN7  
 CpapDRAFT_0153   Clostridium papyrosolvens DSM 2782 EEU61164.1 C7IBP5  
 blood group A- and B-cleaving endo-β-galactosidase (Endo-ABase;EabC)   Clostridium perfringens ATCC 10543 AAR84225.1 Q6RUF5 2VNG[A,B]
2VNO[A,B]
2VNR[A]
 CPF_2129   Clostridium perfringens ATCC 13124 ABG82552.1 Q0TP83 2VMG[A]
2VMH[A]
2VMI[A]
 CPF_1221   Clostridium perfringens ATCC 13124 ABG84474.1 Q0TRS3  
 CPF_1073   Clostridium perfringens ATCC 13124 ABG84962.1 Q0TS71  
 CPF_1073   Clostridium perfringens ATCC 13124 ABG84962.1 Q0TS71  
 CPF_1073   Clostridium perfringens ATCC 13124 ABG84962.1 Q0TS71  
 CPF_1489   Clostridium perfringens ATCC 13124 ABG82278.1 Q0TR08  
 CPF_1489   Clostridium perfringens ATCC 13124 ABG82278.1 Q0TR08  
 CP4_3468   Clostridium perfringens CP4 AEJ34206.1    
 CP4_3468   Clostridium perfringens CP4 AEJ34206.1    
 CPR_1278   Clostridium perfringens SM101 ABG86143.1 Q0STF7  
 CPR_1278   Clostridium perfringens SM101 ABG86143.1 Q0STF7  
 CPR_1842 (possible fragment)   Clostridium perfringens SM101 ABG86823.1 Q0SRV1  
 CPE1875   Clostridium perfringens str. 13 BAB81581.1
NP_562791.1		    
 blood group A- and B-cleaving endo-β-galactosidase (Cpe0329)   Clostridium perfringens str. 13 BAB80035.1
NP_561245.1		    
 CPE1281   Clostridium perfringens str. 13 BAB80987.1    
 CPE1281   Clostridium perfringens str. 13 BAB80987.1    
 CHU_1051   Cytophaga hutchinsonii ATCC 33406 ABG58328.1 Q11W88  
 Deide_1p00980   Deinococcus deserti VCD115 ACO47511.1 C1D272  
 Dgeo_2665   Deinococcus geothermalis DSM 11300 ABF44098.1 Q1J336  
 Dgeo_2665   Deinococcus geothermalis DSM 11300 ABF44098.1 Q1J336  
 Dgeo_2666   Deinococcus geothermalis DSM 11300 ABF44099.1 Q1J335  
 Dgeo_2666   Deinococcus geothermalis DSM 11300 ABF44099.1 Q1J335  
 Dgeo_2644   Deinococcus geothermalis DSM 11300 ABF44077.1 Q1J357  
 Dgeo_2670   Deinococcus geothermalis DSM 11300 ABF44103.1 Q1J331  
 Dgeo_2672   Deinococcus geothermalis DSM 11300 ABF44105.1 Q1J329  
 Dgeo_2672   Deinococcus geothermalis DSM 11300 ABF44105.1 Q1J329  
 Fisuc_1656 / FSU_2145   Fibrobacter succinogenes subsp. succinogenes S85 ACX75251.1
ADL27214.1		 C9RRR5  
 Fisuc_0215 / FSU_0622   Fibrobacter succinogenes subsp. succinogenes S85 ACX73827.1
ADL26195.1		 C9RJW4  
 Fisuc_0401 / FSU_0816   Fibrobacter succinogenes subsp. succinogenes S85 ACX74013.1
ADL25132.1		 C9RL66  
 Halhy_3134   Haliscomenobacter hydrossis DSM 1100 AEE50996.1    
 Halhy_3136   Haliscomenobacter hydrossis DSM 1100 AEE50998.1    
 Intca_3271   Intrasporangium calvum DSM 43043 ADU49754.1    
 Intca_3271   Intrasporangium calvum DSM 43043 ADU49754.1    
 Isova_1907   Isoptericola variabilis 225 AEG44646.1    
 Isova_1907   Isoptericola variabilis 225 AEG44646.1    
 Isop_3537   Isosphaera pallida ATCC 43644 ADV64094.1    
 Kfla_2837   Kribbella flavida DSM 17836 ADB31902.1 D2Q0B0  
 Lbys_1318   Leadbetterella byssophila DSM 17132 ADQ17037.1 E4RVH3  
 Bsph_2599   Lysinibacillus sphaericus C3-41 ACA40143.1 B1HYI2  
 PP1Y_Mpl1025   Novosphingobium sp. PP1Y CCA90088.1    
 Palpr_1630   Paludibacter propionicigenes WB4 ADQ79771.1 E4T4X7  
 Phep_2885   Pedobacter heparinus DSM 2366 ACU05083.1 C6Y1U1  
 Phep_2887   Pedobacter heparinus DSM 2366 ACU05085.1 C6Y1U3  
 Pedsa_2573   Pedobacter saltans DSM 12145 ADY53117.1    
 Psta_2722   Pirellula staleyi DSM 6068 ADB17390.1 D2R6U0  
 Psta_3476   Pirellula staleyi DSM 6068 ADB18138.1 D2QYH9  
 Psta_2909   Pirellula staleyi DSM 6068 ADB17574.1 D2R8N3  
 Psta_3229   Pirellula staleyi DSM 6068 ADB17893.1 D2QX53  
 Plabr_1201   Planctomyces brasiliensis DSM 5305 ADY58816.1    
 Plabr_1201   Planctomyces brasiliensis DSM 5305 ADY58816.1    
 Plabr_2696   Planctomyces brasiliensis DSM 5305 ADY60296.1    
 Plabr_4704   Planctomyces brasiliensis DSM 5305 ADY62275.1    
 Plim_1808   Planctomyces limnophilus DSM 3776 ADG67638.1 D5SYB0  
 Plim_2846   Planctomyces limnophilus DSM 3776 ADG68668.1 D5SRH5  
 Plim_0029   Planctomyces limnophilus DSM 3776 ADG65882.1 D5SMG2  
 RSal33209_1326   Renibacterium salmoninarum ATCC 33209 ABY23063.1 A9WNA0  
 RSal33209_3407   Renibacterium salmoninarum ATCC 33209 ABY25117.1 A9WV96  
 Runsl_4212   Runella slithyformis DSM 19594 AEI50556.1    
 Sama_0156   Shewanella amazonensis SB2B ABL98368.1 A1S1W2  
 Shew_2289   Shewanella loihica PV-4 ABO24155.1 A3QFA7  
 Shew_2289   Shewanella loihica PV-4 ABO24155.1 A3QFA7  
 Slin_4349   Spirosoma linguale DSM 74 ADB40331.1 D2QLP1  
 Slin_2680   Spirosoma linguale DSM 74 ADB38696.1 D2QIB2  
 Smlt4433   Stenotrophomonas maltophilia K279a CAQ47801.1 B2FLK6  
 Smal_3814   Stenotrophomonas maltophilia R551-3 ACF53513.1 B4SM68  
 SEQ_0257   Streptococcus equi subsp. equi 4047 CAW92311.1 C0MAH3  
 SeseC_00206   Streptococcus equi subsp. zooepidemicus ATCC 35246 AEJ24407.1    
 SZO_01600   Streptococcus equi subsp. zooepidemicus H70 CAW97846.1    
 Sez_0186   Streptococcus equi subsp. zooepidemicus MGCS10565 ATCC BAA1716 ACG61564.1 B4U0C1  
 Sequence 4290 from patent US 7074914   Streptococcus pneumoniae ABI04251.1
ABI09292.1
ABJ32808.1
ABJ50421.1
ABL18164.1
ACK14710.1
ACW45429.1		    
 Sequence 4290 from patent US 7074914   Streptococcus pneumoniae ABI04251.1
ABI09292.1
ABJ32808.1
ABJ50421.1
ABL18164.1
ACK14710.1
ACW45429.1		    
 SP670_2305   Streptococcus pneumoniae 670-6B ADM92355.1 E0TRE6  
 SP670_2305   Streptococcus pneumoniae 670-6B ADM92355.1 E0TRE6  
 SP70585_2286   Streptococcus pneumoniae 70585 ACO16885.1 C1CB04  
 SP70585_2286   Streptococcus pneumoniae 70585 ACO16885.1 C1CB04  
 SPCG_2128   Streptococcus pneumoniae CGSP14 ACB91380.1 B2INH9  
 SPCG_2128   Streptococcus pneumoniae CGSP14 ACB91380.1 B2INH9  
 SPG_2101 (fragment)   Streptococcus pneumoniae G54 ACF55203.1 B5E3Q1  
 SPG_2101 (fragment)   Streptococcus pneumoniae G54 ACF55203.1 B5E3Q1  
 SPNOXC_19050   Streptococcus pneumoniae OXC141 CBW33557.1 E1XDJ0  
 SPNOXC_19050   Streptococcus pneumoniae OXC141 CBW33557.1 E1XDJ0  
 endo-β-1,4-galactosidase (CGSSp3BS71_10403;Sp3GH98) (blood-group A/B-antigen-specific)   Streptococcus pneumoniae SP3-BS71 EDK74349.1 A5LBQ0 2YGL[A,B]
2YGM[A,B]
 endo-β-1,4-galactosidase (CGSSp3BS71_10403;Sp3GH98) (blood-group A/B-antigen-specific)   Streptococcus pneumoniae SP3-BS71 EDK74349.1 A5LBQ0 2YGL[A,B]
2YGM[A,B]
 SSUA7_0850   Streptococcus suis A7 AER44175.1    
 SSUA7_0850   Streptococcus suis A7 AER44175.1    
 SAV1475 (AgaB2)   Streptomyces avermitilis MA-4680 BAC69185.1
NP_822650.1		    
 SBI_02019   Streptomyces bingchenggensis BCW-1 ADI05140.1 D7BRH7  
 SBI_02692 (Bga9)   Streptomyces bingchenggensis BCW-1 ADI05813.1 D7C0U1  
 SBI_02693   Streptomyces bingchenggensis BCW-1 ADI05814.1 D7C0U2  
 SBI_09096   Streptomyces bingchenggensis BCW-1 ADI12214.1 D7C213  
 SCATT_33910   Streptomyces cattleya DSM 46488 AEW95762.1    
 SCATT_51290   Streptomyces cattleya DSM 46488 AEW97500.1    
 SCAT_5136   Streptomyces cattleya NRRL 8057 CCB77824.1    
 SCAT_3398 (fragment)   Streptomyces cattleya NRRL 8057 CCB76100.1    
 SCO4117   Streptomyces coelicolor A3(2) CAB92370.1    
 SCO0284 or SCF85.12   Streptomyces coelicolor A3(2) CAB54169.1
NP_624613.1		 Q9S2C9  
 Sfla_2943   Streptomyces flavogriseus ATCC 33331 ADW04370.1 C9N7E0  
 SGR3904   Streptomyces griseus subsp. griseus NBRC 13350 BAG12820.1 B1VR82  
 SGR_1945   Streptomyces griseus subsp. griseus NBRC 13350 BAG18774.1 B1VZ19  
 SHJG_0110   Streptomyces hygroscopicus subsp. jinggangensis 5008 AEY85392.1    
 SHJG_2526   Streptomyces hygroscopicus subsp. jinggangensis 5008 AEY87801.1    
 SHJG_4964   Streptomyces hygroscopicus subsp. jinggangensis 5008 AEY90232.1    
 SCAB_49101   Streptomyces scabiei 87.22 CBG71963.1 C9ZFH6  
 SACTE_3544   Streptomyces sp. SirexAA-E AEN11399.1    
 SACTE_3779   Streptomyces sp. SirexAA-E AEN11624.1    
 SACTE_4756   Streptomyces sp. SirexAA-E AEN12582.1    
 SVEN_1257   Streptomyces venezuelae ATCC 10712 CCA54544.1    
 SVEN_3871   Streptomyces venezuelae ATCC 10712 CCA57157.1    
 SVEN_5220   Streptomyces venezuelae ATCC 10712 CCA58506.1    
 SVEN_6757   Streptomyces venezuelae ATCC 10712 CCA60043.1    
 Strvi_5822   Streptomyces violaceusniger Tu 4113 AEM85332.1    
 TepRe1_0750   Tepidanaerobacter sp. Re1 AEE90937.1    
 zobellia_346 (Alfa1)   Zobellia galactanivorans DsiJT CAZ94419.1    
 zobellia_3523   Zobellia galactanivorans DsiJT CAZ97661.1    
unclassified
Protein Name EC#OrganismGenBankUniprotPDB/3D
 glycosyl hydrolase family 98   uncultured organism ACY24795.1 D8VN10  




Last update: 2012-01-31 © Copyright 1998-2012
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