Carbohydrate-Binding Module Family 50

Known ActivitiesModules of approx. 50 residues found attached to various enzymes from families GH18, GH19, GH23, GH24, GH25 and GH73, i.e. enzymes cleaving either chitin or peptidoglycan. Binding to chitopentaose demonstrated in the case of Pteris ryukyuensis chitinase A [Ohnuma T et al. (2008) J. Biol. Chem. 283:5178-87 (PMID: 18083709)]. CBM50 modules are also found in a multitude of other enzymes targeting the petidoglycan such as peptidases and amidases. These enzymes are not reported in the list below.
NoteAlso known as LysM domains
External resourcesInterPro; PFAM;
Statistics GenBank accession (3148); Uniprot accession (1452); PDB accession (2); 3D entries (3); cryst (1)
All (5085) Archaea (3) Bacteria (4849) Eukaryota (149) Viruses (80) unclassified (4) Structure (3 - 1 cryst) Characterized (2)
unclassified
Protein Name EC#OrganismGenBankUniprotPDB/3D
 LysM (g08)   uncultured organism ACY24838.1 D8VN53  
 Sequence 415 from patent US 7410647.   unidentified ACH29784.1    
 Sequence 415 from patent US 7410647.   unidentified ACH29784.1    
 Sequence 415 from patent US 7410647.   unidentified ACH29784.1    




Last update: 2012-01-31 © Copyright 1998-2012
AFMB - CNRS - Universités Aix-Marseille I & II