Carbohydrate-Binding Module Family 50

Known ActivitiesModules of approx. 50 residues found attached to various enzymes from families GH18, GH19, GH23, GH24, GH25 and GH73, i.e. enzymes cleaving either chitin or peptidoglycan. Binding to chitopentaose demonstrated in the case of Pteris ryukyuensis chitinase A [Ohnuma T et al. (2008) J. Biol. Chem. 283:5178-87 (PMID: 18083709)]. CBM50 modules are also found in a multitude of other enzymes targeting the petidoglycan such as peptidases and amidases. These enzymes are not reported in the list below.
NoteAlso known as LysM domains
External resourcesInterPro; PFAM;
Statistics GenBank accession (3148); Uniprot accession (1452); PDB accession (2); 3D entries (3); cryst (1)
All (5085) Archaea (3) Bacteria (4849) Eukaryota (149) Viruses (80) unclassified (4) Structure (3 - 1 cryst) Characterized (2)
Archaea
Protein Name EC#OrganismGenBankUniprotPDB/3D
 Hbor_38640   Halogeometricum borinquense DSM 11551 ADQ69178.1 E4NVV8  
 Nmag_0771   Natrialba magadii ATCC 43099 ADD04356.1 D3SZZ8  
 BSM_26320   uncultured archaeon CBH39154.1 D1JAM4  




Last update: 2012-01-31 © Copyright 1998-2012
AFMB - CNRS - Universités Aix-Marseille I & II