Carbohydrate-Binding Module Family 42

Activities in FamilyModules of approx. 160 residues found mostly at the C-terminus of GH54 catalytic domains. Binding to arabinofuranose (present in arabinoxylan) has been demonstrated.
3D Structure Statusβ-trefoil
NoteCreated following a paper by Miyanaga A, Koseki T, Matsuzawa H, Wakagi T, Shoun H, Fushinobu S (2004) J.Biol. Chem. 279:44907-44914 (PMID: 15292273)
External resourcesCAZypedia;
Commercial Enzyme Provider(s)NZYTech; PROZOMIX;
Statistics GenBank accession (399); Uniprot accession (75); PDB accession (9); 3D entries (3); cryst (0)
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Bacteria
Protein Name EC#OrganismGenBank UniprotPDB/3D
 GYMC10_4827   Paenibacillus sp. Y412MC10 ACX67045.1 D3ECC1  
 BS614_02320   Paenibacillus xylanexedens PAMC 22703 APO43012.1    
 BS614_25965   Paenibacillus xylanexedens PAMC 22703 APO47159.1    
 AWM70_12365 (fragment)   Paenibacillus yonginensis DCY84 ANS75302.1    
 CIK06_13105   Plantactinospora sp. KBS50 ASW54921.1    
 BW723_06275   Polaribacter reichenbachii 6Alg 8T APZ45923.1    
 BTO17_14295   Polaribacter reichenbachii KCTC 23969 AUC19785.1    
 AD2_02247   Ruminiclostridium thermocellum AD2 ALX09235.1    
 AD2_02830   Ruminiclostridium thermocellum AD2 ALX09808.1    
 AD2_00996   Ruminiclostridium thermocellum AD2 ALX07991.1    
 AD2_02829   Ruminiclostridium thermocellum AD2 ALX09807.1    
 Cthe_0015 (CBM42A)   Ruminiclostridium thermocellum ATCC 27405 ABN51257.1 A3DBC8 3KMV[A,B,C,D,E,F,G,H]
 Cthe_1273 (RsgI5)   Ruminiclostridium thermocellum ATCC 27405 ABN52505.1 A3DEX6  
 Cthe_2138 (CBM42B)   Ruminiclostridium thermocellum ATCC 27405 ABN53342.1 A3DHB3  
 Cthe_2139 (CBM42C)   Ruminiclostridium thermocellum ATCC 27405 ABN53343.1 A3DHB4  
 Clo1313_0985   Ruminiclostridium thermocellum DSM 1313 ADU74053.1    
 Clo1313_2795   Ruminiclostridium thermocellum DSM 1313 ADU75777.1    
 Clo1313_2216   Ruminiclostridium thermocellum DSM 1313 ADU75253.1    
 Clo1313_2794   Ruminiclostridium thermocellum DSM 1313 ADU75776.1    
 LQRI_2841   Ruminiclostridium thermocellum DSM 2360 LQRI ANV77582.1    
 LQRI_0996   Ruminiclostridium thermocellum DSM 2360 LQRI ANV75737.1    
 LQRI_2246   Ruminiclostridium thermocellum DSM 2360 LQRI ANV76987.1    
 LQRI_2840   Ruminiclostridium thermocellum DSM 2360 LQRI ANV77581.1    
 SOCE26_030000   Sorangium cellulosum So ce26 AUX41579.1    
 sce1246   Sorangium cellulosum So ce56 CAN91403.1 A9F658  
 SCE1572_45285   Sorangium cellulosum So0157-2 AGP41089.1    
 SCE1572_14115   Sorangium cellulosum So0157-2 AGP35564.1    
 STAUR_1358   Stigmatella aurantiaca DW4/3-1 ADO69162.1 Q09B80  
 STAUR_1359   Stigmatella aurantiaca DW4/3-1 ADO69163.1 Q09B79  
 STAUR_3819   Stigmatella aurantiaca DW4/3-1 ADO71607.1 Q08RB4  
 STAUR_3988   Stigmatella aurantiaca DW4/3-1 ADO71776.1 E3FL68  
 STAUR_3988   Stigmatella aurantiaca DW4/3-1 ADO71776.1 E3FL68  
 STAUR_4230   Stigmatella aurantiaca DW4/3-1 ADO72012.1 E3FQX9  
 STAUR_4230   Stigmatella aurantiaca DW4/3-1 ADO72012.1 E3FQX9  
 STAUR_4895 (AbfB)   Stigmatella aurantiaca DW4/3-1 ADO72673.1 E3FE70  
 STAUR_0381   Stigmatella aurantiaca DW4/3-1 ADO68190.1 Q08R12  
 STAUR_1449   Stigmatella aurantiaca DW4/3-1 ADO69253.1 Q08WD5  
 STAUR_1449   Stigmatella aurantiaca DW4/3-1 ADO69253.1 Q08WD5  
 XNR_1682   Streptomyces albus J1074 AGI88068.1    
 Salbus254_1947   Streptomyces albus SM254 AMM08469.1    
 BV401_37480   Streptomyces autolyticus CGMCC0516 AQA16756.1    
 exo-α-1,5-L-arabinofuranosidase (SaAraf43A;SAV1043) (Araf43A) 3.2.1.- Streptomyces avermitilis MA-4680 = NBRC 14893 BAC68753.1
NP_822218.1
  3AKF[A]
3AKG[A]
3AKH[A]
3AKI[A]
 SAV1115   Streptomyces avermitilis MA-4680 = NBRC 14893 BAC68825.1
NP_822290.1
   
 SAV6332   Streptomyces avermitilis MA-4680 = NBRC 14893 BAC74043.1    
 SBI_08581   Streptomyces bingchenggensis BCW-1 ADI11699.1 D7BUF0  
 B446_09960   Streptomyces collinus Tu 365 AGS68815.1    
 B446_12085   Streptomyces collinus Tu 365 AGS69239.1    
 BN159_1636   Streptomyces davaonensis JCM 4913 CCK26015.1    
 BN159_1640   Streptomyces davaonensis JCM 4913 CCK26019.1    
 BN159_1639 (Abfb3)   Streptomyces davaonensis JCM 4913 CCK26018.1    
 BN159_2287   Streptomyces davaonensis JCM 4913 CCK26666.1    
 BN159_2379   Streptomyces davaonensis JCM 4913 CCK26758.1    
 BN159_6572   Streptomyces davaonensis JCM 4913 CCK30951.1    
 BN159_1324   Streptomyces davaonensis JCM 4913 CCK25703.1    
 BN159_1637   Streptomyces davaonensis JCM 4913 CCK26016.1    
 SFUL_542   Streptomyces fulvissimus DSM 40593 AGK75526.1    
 WQO_02075   Streptomyces globisporus C-1027 ALU92253.1    
 AVL59_38585   Streptomyces griseochromogenes ATCC 14511 ANP57042.1    
 SGR_6600   Streptomyces griseus subsp. griseus NBRC 13350 BAG23429.1 B1VLN8  
 SHJG_3796   Streptomyces hygroscopicus subsp. jinggangensis 5008 AEY89068.1    
 SHJG_8395   Streptomyces hygroscopicus subsp. jinggangensis 5008 AEY93660.1    
 SHJGH_3561   Streptomyces hygroscopicus subsp. jinggangensis TL01 AGF63226.1    
 SHJGH_8156   Streptomyces hygroscopicus subsp. jinggangensis TL01 AGF67818.1    
 SHL15_7303   Streptomyces hygroscopicus subsp. limoneus KCTC 1717 ALO98312.1    
 SHL15_2349   Streptomyces hygroscopicus subsp. limoneus KCTC 1717 ALO93502.1    
 SHXM_01089   Streptomyces hygroscopicus XM201 AQW47626.1    
 SHXM_02116   Streptomyces hygroscopicus XM201 AQW48653.1    
 SHXM_07924   Streptomyces hygroscopicus XM201 AQW54461.1    
 ABB07_26820   Streptomyces incarnatus NRRL 8089 AKJ13512.1    
 ABB07_28920   Streptomyces incarnatus NRRL 8089 AKJ13918.1    
 SIRAN8891   Streptomyces iranensis CDR16089.1    
 SIRAN1809   Streptomyces iranensis CDR04741.1    
 SLINC_4526   Streptomyces lincolnensis NRRL 2936 ANS66750.1    
 SLINC_6515   Streptomyces lincolnensis NRRL 2936 ANS68739.1    
 SLINC_2214   Streptomyces lincolnensis NRRL 2936 ANS64438.1    
 SLINC_3667   Streptomyces lincolnensis NRRL 2936 ANS65891.1    
 SLINC_6688   Streptomyces lincolnensis NRRL 2936 ANS68912.1    
 SLINC_7414   Streptomyces lincolnensis NRRL 2936 ANS69638.1    
 SMALA_6777   Streptomyces malaysiensis DSM 4137 ATL86997.1    
 BBN63_02095   Streptomyces niveus SCSIO 3406 AQU70584.1    
 SNOD_31340   Streptomyces nodosus ATCC 14899 AJE43988.1    
 SNOUR_42120   Streptomyces noursei ATCC 11455 ANZ21652.1    
 Spa2297_00695   Streptomyces parvulus 2297 ANJ05626.1    
 Spa2297_00695   Streptomyces parvulus 2297 ANJ05626.1    
 LK06_006430   Streptomyces pluripotens MUSC 135 ARP69645.1    
 LK07_07535   Streptomyces pluripotens MUSC 137 ASN23902.1    
 Sfla_5898   Streptomyces pratensis ATCC 33331 ADW07285.1 C9N2K5  
 SPRI_1977   Streptomyces pristinaespiralis HCCB 10218 ALC20283.1    
 BFF78_29580   Streptomyces puniciscabiei TW1S1 AOR34651.1    
 M271_08720   Streptomyces rapamycinicus NRRL 5491 AGP53364.1    
 M271_45015   Streptomyces rapamycinicus NRRL 5491 AGP60371.1    
 TUE45_pSRTUE45c_0339 (UidA)   Streptomyces reticuli CUW32971.1    
 SCAB_10151   Streptomyces scabiei 87.22 CBG68190.1 C9Z3D3  
 SCAB_10161   Streptomyces scabiei 87.22 CBG68191.1 C9Z3D4  
 SCAB_10171   Streptomyces scabiei 87.22 CBG68192.1 C9Z3D5  
 SCAB_19941   Streptomyces scabiei 87.22 CBG69111.1 C9YUL1  
 SCAB_44321   Streptomyces scabiei 87.22 CBG71495.1 C9Z7A1  
 SCAB_66031   Streptomyces scabiei 87.22 CBG73603.1 C9ZFW3  
 SCAB_16521   Streptomyces scabiei 87.22 CBG68787.1 C9ZD59  
 SCAB_19951   Streptomyces scabiei 87.22 CBG69112.1 C9YUL2  
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