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Carbohydrate-Binding Module Family 25

Known ActivitiesStarch-binding function demonstrated in one case.
3D Structure Statusβ-sandwich
NoteFormerly known as X5 modules; structurally related to CBM26 modules
External resourcesInterPro; PFAM;
Statistics GenBank accession (93); Uniprot accession (58); PDB accession (3); 3D entries (2); cryst (2)
Summary
All (119) Bacteria (119) Structure (2 - 2 cryst)
Bacteria
Protein Name EC#OrganismGenBankUniprotPDB/3D
 Acear_0308   Acetohalobium arabaticum DSM 5501 ADL11857.1 D9QU64  
 Adeg_1051   Ammonifex degensii KC4 ACX52183.1 C9RD56  
 Adeg_0832   Ammonifex degensii KC4 ACX51973.1 C9RCJ6  
 α-1,6-cyclomaltopentaose-forming glucanotransferase (IgtY)   Bacillus circulans AM7 BAF37283.1 A0P8W9  
 α-1,6-cyclomaltopentaose-forming glucanotransferase (IgtY)   Bacillus circulans AM7 BAF37283.1 A0P8W9  
 α-amylase (IgtZ)   Bacillus circulans AM7 BAF37284.1 A0P8X0  
 α-amylase (IgtZ)   Bacillus circulans AM7 BAF37284.1 A0P8X0  
 β-amylase   Bacillus circulans NCIB 11033 CAA68578.1 P06547.1  
 ABC1611 (probable maltohexaose-forming amylase)   Bacillus clausii KSM-K16 BAD64146.1 Q5WHK9  
 β-amylase (fragment)   Bacillus firmus BAA19075.1 P96513  
 α-amylase I (AmyI) (alkaline;thermostable)   Bacillus halodurans 38C-2-1 BAF93484.1 A8QWV3  
 α-amylase G-6 (BH0413)   Bacillus halodurans C-125 BAB04132.1
NP_241279.1		 Q9KFR4 2C3V[A,B]
2C3W[A,B,C,D]
2C3X[A,B]
 maltohexaose-forming α-amylase (Amy 34)   Bacillus halodurans LBK 34 AAS99099.1 Q5GIA5  
 maltotetraose-producing α-amylase (AmyA) (alkaline, thermotolerant)   Bacillus halodurans MS-2-5 BAG70894.1 B5MEM6  
 ORF (fragment)   Bacillus horikoshii CAK97857.1    
 ORF (fragment)   Bacillus horikoshii CAK97857.1    
 α-amylase (BAA)   Bacillus sp. 195 BAA22082.1 O24781  
 α-amylase (BAA)   Bacillus sp. 195 BAA22082.1 O24781  
 maltohexaose-forming amylase (G6-amylase)   Bacillus sp. H-167 CAA39096.1 Q45574  
 Daud_1163   Candidatus Desulforudis audaxviator MP104C ACA59674.1 B1I453  
 α-amylase (AmyA;AmyP;CAP0168)   Clostridium acetobutylicum ATCC 824 AAA63759.1
AAA63759.2
AAD47072.1
AAK76913.1
NP_149331.1		 P23671.2  
 α-amylase (AmyA;AmyP;CAP0168)   Clostridium acetobutylicum ATCC 824 AAA63759.1
AAA63759.2
AAD47072.1
AAK76913.1
NP_149331.1		 P23671.2  
 α-amylase (AmyA;AmyP;CAP0168)   Clostridium acetobutylicum ATCC 824 AAA63759.1
AAA63759.2
AAD47072.1
AAK76913.1
NP_149331.1		 P23671.2  
 CAP0098   Clostridium acetobutylicum ATCC 824 AAK76843.1
NP_149261.1		 Q97TK3  
 SMB_P166 (AmyA)   Clostridium acetobutylicum DSM 1731 AEI34909.1    
 SMB_P166 (AmyA)   Clostridium acetobutylicum DSM 1731 AEI34909.1    
 SMB_P166 (AmyA)   Clostridium acetobutylicum DSM 1731 AEI34909.1    
 SMB_P096 (AmyA)   Clostridium acetobutylicum DSM 1731 AEI34839.1    
 CEA_P0166   Clostridium acetobutylicum EA 2018 ADZ22949.1    
 CEA_P0166   Clostridium acetobutylicum EA 2018 ADZ22949.1    
 CEA_P0166   Clostridium acetobutylicum EA 2018 ADZ22949.1    
 CEA_P0097 (AmyA)   Clostridium acetobutylicum EA 2018 ADZ22880.1    
 Cbei_0664   Clostridium beijerinckii NCIMB 8052 ABR32851.1 A6LR71  
 Cbei_0664   Clostridium beijerinckii NCIMB 8052 ABR32851.1 A6LR71  
 Ccel_2169   Clostridium cellulolyticum H10 ATCC 35319 ACL76511.1 B8I478  
 Clocl_1423   Clostridium clariflavum DSM 19732 AEV68074.1    
 Clocl_2401   Clostridium clariflavum DSM 19732 AEV68978.1    
 Clocl_2875   Clostridium clariflavum DSM 19732 AEV69422.1    
 Clocl_3831   Clostridium clariflavum DSM 19732 AEV70281.1    
 Clole_0109   Clostridium lentocellum DSM 5427 ADZ81868.1    
 Clo1100_2574   Clostridium sp. BNL1100 AEY66740.1    
 Cthe_0956   Clostridium thermocellum ATCC 27405 ABN52190.1 A3DE11  
 Cthe_3163   Clostridium thermocellum ATCC 27405 ABN54358.1 A3DK79  
 Cthe_1080   Clostridium thermocellum ATCC 27405 ABN52312.1 A3DED3  
 Clo1313_1260   Clostridium thermocellum DSM 1313 ADU74323.1    
 Clo1313_1133   Clostridium thermocellum DSM 1313 ADU74197.1    
 Clo1313_0714   Clostridium thermocellum DSM 1313 ADU73792.1    
 ORF8   Cystobacter fuscus AAW03335.1 Q5MD26  
 ORF8   Cystobacter fuscus AAW03335.1 Q5MD26  
 Dtox_3604   Desulfotomaculum acetoxidans DSM 771 ACV64316.1 C8VW29  
 Dtox_1305   Desulfotomaculum acetoxidans DSM 771 ACV62187.1 C8W698  
 Dtox_0786   Desulfotomaculum acetoxidans DSM 771 ACV61695.1 C8W231  
 Dtox_3542   Desulfotomaculum acetoxidans DSM 771 ACV64258.1 C8VVX1  
 Desca_1721   Desulfotomaculum carboxydivorans CO-1-SRB AEF94569.1    
 Desku_1671   Desulfotomaculum kuznetsovii DSM 6115 AEG15249.1    
 Desku_1874   Desulfotomaculum kuznetsovii DSM 6115 AEG15437.1    
 Dred_2336   Desulfotomaculum reducens MI-1 ABO50846.1 A4J6Z3  
 Desru_1330   Desulfotomaculum ruminis DSM 2154 AEG59603.1    
 HMPREF0424_0610 (Pula_1)   Gardnerella vaginalis 409-05 ADB14280.1 D2RAL0  
 HMPREF0421_21227   Gardnerella vaginalis ATCC 14019 ADP39309.1 E3D7L7  
 HMPREF9231_0306   Gardnerella vaginalis HMP9231 AEF31029.1    
 Hore_16020   Halothermothrix orenii H 168 H 168; DSM 9562 ACL70351.1 B8CYI2  
 HM1_2795   Heliobacterium modesticaldum Ice1 ATCC 51547 ABZ85324.1 B0TCD6  
 Jden_1926   Jonesia denitrificans DSM 20603 ACV09568.1 C7R010  
 Jden_1926   Jonesia denitrificans DSM 20603 ACV09568.1 C7R010  
 Jden_1927   Jonesia denitrificans DSM 20603 ACV09569.1 C7R011  
 Jden_1927   Jonesia denitrificans DSM 20603 ACV09569.1 C7R011  
 Jden_1927   Jonesia denitrificans DSM 20603 ACV09569.1 C7R011  
 α-amylase (Amy;KVA)   Kocuria varians ATCC 21971 BAJ52728.1    
 α-amylase (Amy;KVA)   Kocuria varians ATCC 21971 BAJ52728.1    
 Mahau_1013 (fragment)   Mahella australiensis 50-1 BON AEE96211.1    
 Micau_4631   Micromonospora aurantiaca ATCC 27029 ADL48143.1 D9T7F1  
 Micau_4631   Micromonospora aurantiaca ATCC 27029 ADL48143.1 D9T7F1  
 ML5_3670   Micromonospora sp. L5 ADU09181.1 D3CE98  
 ML5_3670   Micromonospora sp. L5 ADU09181.1 D3CE98  
 Moth_1937   Moorella thermoacetica ATCC 39073 ABC20235.1 Q2RH54  
 PaecuDRAFT_3395   Paenibacillus curdlanolyticus YK9 EFM09892.1 E0ICK6  
 PaecuDRAFT_3395   Paenibacillus curdlanolyticus YK9 EFM09892.1 E0ICK6  
 KNP414_01446   Paenibacillus mucilaginosus KNP414 AEI40010.1    
 KNP414_01446   Paenibacillus mucilaginosus KNP414 AEI40010.1    
 KNP414_02129   Paenibacillus mucilaginosus KNP414 AEI40690.1    
 KNP414_02129   Paenibacillus mucilaginosus KNP414 AEI40690.1    
 KNP414_00417   Paenibacillus mucilaginosus KNP414 AEI39042.1    
 multidomain α-amylase / β-amylase   Paenibacillus polymyxa AAA85446.1
CAA68344.1		 P21543.1 cryst
 multidomain α-amylase / β-amylase   Paenibacillus polymyxa AAA85446.1
CAA68344.1		 P21543.1 cryst
 PPE_04705   Paenibacillus polymyxa E681 ADM72464.1 E0RL27  
 PPE_02355   Paenibacillus polymyxa E681 ADM70185.1 E0RLI5  
 PPSC2_c5221   Paenibacillus polymyxa SC2 ADO59158.1 E3E7E7  
 PPSC2_c5221   Paenibacillus polymyxa SC2 ADO59158.1 E3E7E7  
 β-amylase   Paenibacillus sp. KCTC8848P AAK69489.1 Q934J0  
 β-amylase   Paenibacillus sp. KCTC8848P AAK69489.1 Q934J0  
 HPL003_06095   Paenibacillus terrae HPL-003 AET57982.1    
 HPL003_06095   Paenibacillus terrae HPL-003 AET57982.1    
 PTH_1938   Pelotomaculum thermopropionicum SI BAF60119.1 A5D0W5  
 PTH_2516   Pelotomaculum thermopropionicum SI BAF60697.1 A5CZ91  
 PTH_2901   Pelotomaculum thermopropionicum SI BAF61082.1 A5CY61  
 STAUR_2905   Stigmatella aurantiaca DW4/3-1 ADO70697.1 E3FQK4  
 STAUR_2905   Stigmatella aurantiaca DW4/3-1 ADO70697.1 E3FQK4  
 STIAU_0660   Stigmatella aurantiaca DW4/3-1 ADO68763.1
ZP_01465524.1		 Q08T95  
 STIAU_0660   Stigmatella aurantiaca DW4/3-1 ADO68763.1
ZP_01465524.1		 Q08T95  
 SCO7019 (Aml)   Streptomyces coelicolor A3(2) CAB88152.1
NP_631083.1		 Q9L036  
 SCO7019 (Aml)   Streptomyces coelicolor A3(2) CAB88152.1
NP_631083.1		 Q9L036  
 Sfla_5906   Streptomyces flavogriseus ATCC 33331 ADW07293.1 C9N2L1  
 Sfla_5906   Streptomyces flavogriseus ATCC 33331 ADW07293.1 C9N2L1  
 SGR_6609   Streptomyces griseus subsp. griseus NBRC 13350 BAG23438.1 B1VLP7  
 SGR_6609   Streptomyces griseus subsp. griseus NBRC 13350 BAG23438.1 B1VLP7  
 α-amylase (AmlC)   Streptomyces lividans TK24 CAB06816.1 P96992  
 α-amylase (AmlC)   Streptomyces lividans TK24 CAB06816.1 P96992  
 SVEN_6999   Streptomyces venezuelae ATCC 10712 CCA60285.1    
 SVEN_6999   Streptomyces venezuelae ATCC 10712 CCA60285.1    
 Sros_3336   Streptosporangium roseum DSM 43021 ACZ86275.1 D2BDI6  
 Sros_3336   Streptosporangium roseum DSM 43021 ACZ86275.1 D2BDI6  
 Sros_3337   Streptosporangium roseum DSM 43021 ACZ86276.1 D2BDI7  
 Slip_0513   Syntrophothermus lipocalidus DSM 12680 ADI01297.1 D7CKR2  
 Slip_0512 (possible fragment)   Syntrophothermus lipocalidus DSM 12680 ADI01296.1 D7CKR1  
 TherJR_0882   Thermincola sp. JR ADG81749.1 D5XDA1  
 maltopentaose-forming amylase   unidentified bacterium UGO163/26 / DSM 5853 CAA37453.1 Q03658  
 maltopentaose-forming amylase   unidentified bacterium UGO163/26 / DSM 5853 CAA37453.1 Q03658  
 maltopentaose-forming amylase   unidentified bacterium UGO163/26 / DSM 5853 CAA37453.1 Q03658  




Last update: 2012-01-31 © Copyright 1998-2012
AFMB - CNRS - Universités Aix-Marseille I & II